RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W TAF4P50105 388 aa2.11□□□□□ -2.07
UBP1YDL122W YML6P51998 286 aa2.11□□□□□ -2.07
UBP1YDL122W PEX31P53203 462 aa2.11□□□□□ -2.07
UBP1YDL122W PEF1P53238 335 aa2.11□□□□□ -2.07
UBP1YDL122W RSM24Q03976 319 aa2.11□□□□□ -2.07
UBP1YDL122W UTP21Q06078 939 aaPredicted RBP2.11□□□□□ -2.07
UBP1YDL122W PSK2Q08217 1101 aa2.11□□□□□ -2.07
UBP1YDL122W GEP5Q12393 293 aa2.11□□□□□ -2.07
UBP1YDL122W AI5_BETAQ9ZZX0 354 aa2.11□□□□□ -2.07
UBP1YDL122W JIP3O13555 125 aa2.11□□□□□ -2.07
UBP1YDL122W URA3P03962 267 aa2.11□□□□□ -2.07
UBP1YDL122W FRS1P15624 595 aaKnown RBP2.11□□□□□ -2.07
UBP1YDL122W ALG1P16661 449 aa2.11□□□□□ -2.07
UBP1YDL122W RFA2P26754 273 aaKnown RBP2.11□□□□□ -2.07
UBP1YDL122W KAR9P32526 644 aa2.11□□□□□ -2.07
UBP1YDL122W NPL6P32832 435 aa2.11□□□□□ -2.07
UBP1YDL122W CAB3P36076 571 aa2.11□□□□□ -2.07
UBP1YDL122W FSH1P38777 243 aaKnown RBP2.11□□□□□ -2.07
UBP1YDL122W SDP1P40479 209 aa2.11□□□□□ -2.07
UBP1YDL122W CAB2P40506 365 aa2.11□□□□□ -2.07
UBP1YDL122W AXL1P40851 1208 aa2.11□□□□□ -2.07
UBP1YDL122W MET12P46151 657 aa2.11□□□□□ -2.07
UBP1YDL122W SIP4P46954 829 aa2.11□□□□□ -2.07
UBP1YDL122W YDR132CQ03900 495 aa2.11□□□□□ -2.07
UBP1YDL122W ASM4Q05166 528 aa2.11□□□□□ -2.07
UBP1YDL122W PFK27Q12471 397 aaPredicted RBP2.11□□□□□ -2.07
UBP1YDL122W YLR358CO13565 187 aa2.1□□□□□ -2.07
UBP1YDL122W TUF1P02992 437 aaKnown RBP2.1□□□□□ -2.07
UBP1YDL122W CKA1P15790 372 aa2.1□□□□□ -2.07
UBP1YDL122W SRV2P17555 526 aaKnown RBP2.1□□□□□ -2.07
UBP1YDL122W SAC6P32599 642 aaKnown RBP2.1□□□□□ -2.07
UBP1YDL122W TOD6P34219 525 aa2.1□□□□□ -2.07
UBP1YDL122W MTH1P35198 433 aa2.1□□□□□ -2.07
UBP1YDL122W CAJ1P39101 391 aa2.1□□□□□ -2.07
UBP1YDL122W SPO22P40511 975 aa2.1□□□□□ -2.07
UBP1YDL122W PFA3P42836 336 aa2.1□□□□□ -2.07
UBP1YDL122W PRP31P49704 494 aaPredicted RBP2.1□□□□□ -2.07
UBP1YDL122W IMA1P53051 589 aa2.1□□□□□ -2.07
UBP1YDL122W MKC7P53379 596 aa2.1□□□□□ -2.07
UBP1YDL122W ACS1Q01574 713 aa2.1□□□□□ -2.07
UBP1YDL122W YPL071CQ02864 156 aa2.1□□□□□ -2.07
UBP1YDL122W ARO80Q04052 950 aa2.1□□□□□ -2.07
UBP1YDL122W VBA4Q04602 768 aaKnown RBP2.1□□□□□ -2.07
UBP1YDL122W PML1Q07930 204 aaPredicted RBP2.1□□□□□ -2.07
UBP1YDL122W RIB2Q12362 591 aaKnown RBP2.1□□□□□ -2.07
UBP1YDL122W GCN4P03069 281 aa2.1□□□□□ -2.07
UBP1YDL122W ERG20P08524 352 aaKnown RBP2.1□□□□□ -2.07
UBP1YDL122W SCH9P11792 824 aaKnown RBP2.1□□□□□ -2.07
UBP1YDL122W OLE1P21147 510 aaKnown RBP2.1□□□□□ -2.07
UBP1YDL122W ARG1P22768 420 aa2.1□□□□□ -2.07
UBP1YDL122W RRT12P25381 491 aa2.1□□□□□ -2.07
UBP1YDL122W ARP2P32381 391 aaKnown RBP2.1□□□□□ -2.07
UBP1YDL122W RMA1P36001 430 aaKnown RBP2.1□□□□□ -2.07
UBP1YDL122W APT2P36973 181 aa2.1□□□□□ -2.07
UBP1YDL122W ABZ1P37254 787 aaPredicted RBP2.1□□□□□ -2.07
UBP1YDL122W URA8P38627 578 aaPredicted RBP2.1□□□□□ -2.07
UBP1YDL122W YER130CP39959 443 aa2.1□□□□□ -2.07
UBP1YDL122W YER188WP40103 239 aa2.1□□□□□ -2.07
UBP1YDL122W LCB2P40970 561 aa2.1□□□□□ -2.07
UBP1YDL122W BUD8P41698 603 aa2.1□□□□□ -2.07
UBP1YDL122W TAH11P47112 604 aa2.1□□□□□ -2.07
UBP1YDL122W TEL2P53038 688 aa2.1□□□□□ -2.07
UBP1YDL122W YGR016WP53209 190 aa2.1□□□□□ -2.07
UBP1YDL122W TIM8P57744 87 aa2.1□□□□□ -2.07
UBP1YDL122W REC102Q02721 264 aa2.1□□□□□ -2.07
UBP1YDL122W ATG21Q02887 496 aa2.1□□□□□ -2.07
UBP1YDL122W MUS81Q04149 632 aaPredicted RBP2.1□□□□□ -2.07
UBP1YDL122W EMI1Q04406 187 aa2.1□□□□□ -2.07
UBP1YDL122W YOL107WQ12239 342 aa2.1□□□□□ -2.07
UBP1YDL122W YLR302CO13544 120 aa2.09□□□□□ -2.07
UBP1YDL122W ARG3P05150 338 aa2.09□□□□□ -2.07
UBP1YDL122W SEC53P07283 254 aaKnown RBP2.09□□□□□ -2.07
UBP1YDL122W PDX1P16451 410 aa2.09□□□□□ -2.07
UBP1YDL122W YGP1P38616 354 aaKnown RBP2.09□□□□□ -2.07
UBP1YDL122W UTP9P38882 575 aaKnown RBP2.09□□□□□ -2.07
UBP1YDL122W CYC2P38909 366 aa2.09□□□□□ -2.07
UBP1YDL122W YJL206CP39529 758 aa2.09□□□□□ -2.07
UBP1YDL122W JEM1P40358 645 aa2.09□□□□□ -2.07
UBP1YDL122W ATP22P50273 684 aaPredicted RBP2.09□□□□□ -2.07
UBP1YDL122W DUO1P53168 247 aaKnown RBP2.09□□□□□ -2.07
UBP1YDL122W PDR16P53860 351 aaKnown RBP2.09□□□□□ -2.07
UBP1YDL122W DUG3P53871 357 aa2.09□□□□□ -2.07
UBP1YDL122W YNL144CP53907 740 aa2.09□□□□□ -2.07
UBP1YDL122W ARG5,6Q01217 863 aa2.09□□□□□ -2.07
UBP1YDL122W MRS2Q01926 470 aa2.09□□□□□ -2.07
UBP1YDL122W ELP3Q02908 557 aaKnown RBP2.09□□□□□ -2.07
UBP1YDL122W YMR155WQ03795 547 aa2.09□□□□□ -2.07
UBP1YDL122W VPS36Q06696 566 aa2.09□□□□□ -2.07
UBP1YDL122W VTS1Q08831 523 aaKnown RBP RIP-Chip data2.09□□□□□ -2.07not detected
UBP1YDL122W PFA4Q12006 378 aa2.09□□□□□ -2.07
UBP1YDL122W VPS54Q12071 889 aa2.09□□□□□ -2.07
UBP1YDL122W YBR126W-AQ8TGU7 68 aa2.09□□□□□ -2.07
UBP1YDL122W YER145C-AA0A023PYF4 145 aa2.09□□□□□ -2.08
UBP1YDL122W HIS1P00498 297 aaKnown RBP2.09□□□□□ -2.08
UBP1YDL122W MET17P06106 444 aa2.09□□□□□ -2.08
UBP1YDL122W BIK1P11709 440 aa2.09□□□□□ -2.08
UBP1YDL122W PCT1P13259 424 aa2.09□□□□□ -2.08
UBP1YDL122W EPT1P22140 391 aa2.09□□□□□ -2.08
UBP1YDL122W ELO2P25358 347 aa2.09□□□□□ -2.08
UBP1YDL122W SED4P25365 1065 aa2.09□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms