RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 CKAP2LQ8IYA6 745 aa14.84□□□□□ -0.03
PHGDH-221ENST00000641573 CPXCR1Q8N123 301 aa14.84□□□□□ -0.03
PHGDH-221ENST00000641573 TBC1D5Q92609 795 aa14.84□□□□□ -0.03
PHGDH-221ENST00000641573 TRIM47Q96LD4 638 aa14.84□□□□□ -0.03
PHGDH-221ENST00000641573 SDF4Q9BRK5 362 aa14.84□□□□□ -0.03
PHGDH-221ENST00000641573 RNF208Q9H0X6 261 aa14.84□□□□□ -0.03
PHGDH-221ENST00000641573 ZSWIM8A7E2V4 1837 aa14.83□□□□□ -0.04
PHGDH-221ENST00000641573 FARP2O94887 1054 aaPredicted RBP14.83□□□□□ -0.04
PHGDH-221ENST00000641573 CCL5P13501 91 aa14.83□□□□□ -0.04
PHGDH-221ENST00000641573 GCFC2P16383 781 aaKnown RBP14.83□□□□□ -0.04
PHGDH-221ENST00000641573 DEKP35659 375 aaKnown RBP14.83□□□□□ -0.04
PHGDH-221ENST00000641573 LONP1P36776 959 aaKnown RBP14.83□□□□□ -0.04
PHGDH-221ENST00000641573 PSMC4P43686 418 aa14.83□□□□□ -0.04
PHGDH-221ENST00000641573 USP11P51784 963 aa14.83□□□□□ -0.04
PHGDH-221ENST00000641573 PPIL2Q13356 520 aa14.83□□□□□ -0.04
PHGDH-221ENST00000641573 SNAPC2Q13487 334 aa14.83□□□□□ -0.04
PHGDH-221ENST00000641573 PPP4R3AQ6IN85 833 aa14.83□□□□□ -0.04
PHGDH-221ENST00000641573 POTEDQ86YR6 584 aa14.83□□□□□ -0.04
PHGDH-221ENST00000641573 SYMPKQ92797 1274 aaKnown RBP14.83□□□□□ -0.04
PHGDH-221ENST00000641573 LRCH3Q96II8 777 aa14.83□□□□□ -0.04
PHGDH-221ENST00000641573 EPSTI1Q96J88 318 aa14.83□□□□□ -0.04
PHGDH-221ENST00000641573 FUCA2Q9BTY2 467 aa14.83□□□□□ -0.04
PHGDH-221ENST00000641573 SRRDQ9UH36 339 aa14.83□□□□□ -0.04
PHGDH-221ENST00000641573 A0A0G2JLL6 359 aaPredicted RBP14.82□□□□□ -0.04
PHGDH-221ENST00000641573 SOX1O00570 391 aaPredicted RBP14.82□□□□□ -0.04
PHGDH-221ENST00000641573 IRF6O14896 467 aa14.82□□□□□ -0.04
PHGDH-221ENST00000641573 SLC37A4O43826 429 aa14.82□□□□□ -0.04
PHGDH-221ENST00000641573 ALAS1P13196 640 aa14.82□□□□□ -0.04
PHGDH-221ENST00000641573 SREBF1P36956 1147 aa14.82□□□□□ -0.04
PHGDH-221ENST00000641573 ARHGAP4P98171 946 aa14.82□□□□□ -0.04
PHGDH-221ENST00000641573 CALCRLQ16602 461 aa14.82□□□□□ -0.04
PHGDH-221ENST00000641573 TREML2Q5T2D2 321 aa14.82□□□□□ -0.04
PHGDH-221ENST00000641573 L1TD1Q5T7N2 865 aaKnown RBP14.82□□□□□ -0.04
PHGDH-221ENST00000641573 KRBA2Q6ZNG9 492 aa14.82□□□□□ -0.04
PHGDH-221ENST00000641573 GADL1Q6ZQY3 521 aa14.82□□□□□ -0.04
PHGDH-221ENST00000641573 PRRT2Q7Z6L0 340 aaPredicted RBP14.82□□□□□ -0.04
PHGDH-221ENST00000641573 UBE2Q1Q7Z7E8 422 aa14.82□□□□□ -0.04
PHGDH-221ENST00000641573 FCHSD1Q86WN1 690 aa14.82□□□□□ -0.04
PHGDH-221ENST00000641573 REPS2Q8NFH8 660 aa14.82□□□□□ -0.04
PHGDH-221ENST00000641573 CLEC4DQ8WXI8 215 aa14.82□□□□□ -0.04
PHGDH-221ENST00000641573 MTMR9Q96QG7 549 aa14.82□□□□□ -0.04
PHGDH-221ENST00000641573 PANK2Q9BZ23 570 aa14.82□□□□□ -0.04
PHGDH-221ENST00000641573 HOXC10Q9NYD6 342 aa14.82□□□□□ -0.04
PHGDH-221ENST00000641573 DDX25Q9UHL0 483 aaKnown RBP14.82□□□□□ -0.04
PHGDH-221ENST00000641573 ADAMTS5Q9UNA0 930 aa14.82□□□□□ -0.04
PHGDH-221ENST00000641573 KCNH4Q9UQ05 1017 aa14.82□□□□□ -0.04
PHGDH-221ENST00000641573 MYPNQ86TC9 1320 aa14.82□□□□□ -0.04
PHGDH-221ENST00000641573 CYP3A7-CYP3A51PA0A087WV96 503 aa14.81□□□□□ -0.04
PHGDH-221ENST00000641573 BTBD19C9JJ37 291 aa14.81□□□□□ -0.04
PHGDH-221ENST00000641573 POLR2DO15514 142 aaKnown RBP14.81□□□□□ -0.04
PHGDH-221ENST00000641573 CCDC192P0DO97 292 aa14.81□□□□□ -0.04
PHGDH-221ENST00000641573 CYP3A7P24462 503 aa14.81□□□□□ -0.04
PHGDH-221ENST00000641573 OAZ1P54368 228 aa14.81□□□□□ -0.04
PHGDH-221ENST00000641573 LONRF3Q496Y0 759 aa14.81□□□□□ -0.04
PHGDH-221ENST00000641573 SASS6Q6UVJ0 657 aa14.81□□□□□ -0.04
PHGDH-221ENST00000641573 MOXD1Q6UVY6 613 aa14.81□□□□□ -0.04
PHGDH-221ENST00000641573 MCF2L2Q86YR7 1114 aa14.81□□□□□ -0.04
PHGDH-221ENST00000641573 PROCA1Q8NCQ7 364 aaPredicted RBP14.81□□□□□ -0.04
PHGDH-221ENST00000641573 CNNM3Q8NE01 707 aa14.81□□□□□ -0.04
PHGDH-221ENST00000641573 U2AF1L4Q8WU68 220 aaKnown RBP14.81□□□□□ -0.04
PHGDH-221ENST00000641573 CRYGNQ8WXF5 182 aa14.81□□□□□ -0.04
PHGDH-221ENST00000641573 MBOAT7Q96N66 472 aa14.81□□□□□ -0.04
PHGDH-221ENST00000641573 RBSNQ9H1K0 784 aa14.81□□□□□ -0.04
PHGDH-221ENST00000641573 EHMT1Q9H9B1 1298 aa14.81□□□□□ -0.04
PHGDH-221ENST00000641573 GRPEL1Q9HAV7 217 aa14.81□□□□□ -0.04
PHGDH-221ENST00000641573 SPDYE16A6NNV3 312 aaPredicted RBP14.8□□□□□ -0.04
PHGDH-221ENST00000641573 NFIBO00712 420 aa14.8□□□□□ -0.04
PHGDH-221ENST00000641573 CYP3A4P08684 503 aa14.8□□□□□ -0.04
PHGDH-221ENST00000641573 OSBPP22059 807 aa14.8□□□□□ -0.04
PHGDH-221ENST00000641573 TXLNAP40222 546 aa14.8□□□□□ -0.04
PHGDH-221ENST00000641573 TXKP42681 527 aa14.8□□□□□ -0.04
PHGDH-221ENST00000641573 MRE11P49959 708 aa14.8□□□□□ -0.04
PHGDH-221ENST00000641573 HSD17B4P51659 736 aa14.8□□□□□ -0.04
PHGDH-221ENST00000641573 TYRO3Q06418 890 aa14.8□□□□□ -0.04
PHGDH-221ENST00000641573 MUM1L1Q5H9M0 696 aa14.8□□□□□ -0.04
PHGDH-221ENST00000641573 ELOA2Q8IYF1 753 aaPredicted RBP14.8□□□□□ -0.04
PHGDH-221ENST00000641573 PDILTQ8N807 584 aa14.8□□□□□ -0.04
PHGDH-221ENST00000641573 TRERF1Q96PN7 1200 aa14.8□□□□□ -0.04
PHGDH-221ENST00000641573 SERTAD1Q9UHV2 236 aa14.8□□□□□ -0.04
PHGDH-221ENST00000641573 CPA4Q9UI42 421 aa14.8□□□□□ -0.04
PHGDH-221ENST00000641573 A0A087X0B3 334 aa14.79□□□□□ -0.04
PHGDH-221ENST00000641573 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.79□□□□□ -0.04
PHGDH-221ENST00000641573 HOXA7P31268 230 aaPredicted RBP14.79□□□□□ -0.04
PHGDH-221ENST00000641573 CIITAP33076 1130 aa14.79□□□□□ -0.04
PHGDH-221ENST00000641573 GHRHRQ02643 423 aa14.79□□□□□ -0.04
PHGDH-221ENST00000641573 TMEM132BQ14DG7 1078 aa14.79□□□□□ -0.04
PHGDH-221ENST00000641573 PARP14Q460N5 1801 aa14.79□□□□□ -0.04
PHGDH-221ENST00000641573 SNRNP48Q6IEG0 339 aaKnown RBP14.79□□□□□ -0.04
PHGDH-221ENST00000641573 C17orf99Q6UX52 265 aa14.79□□□□□ -0.04
PHGDH-221ENST00000641573 DEFB123Q8N688 67 aa14.79□□□□□ -0.04
PHGDH-221ENST00000641573 SAMD3Q8N6K7 520 aa14.79□□□□□ -0.04
PHGDH-221ENST00000641573 DHX58Q96C10 678 aa14.79□□□□□ -0.04
PHGDH-221ENST00000641573 AK8Q96MA6 479 aa14.79□□□□□ -0.04
PHGDH-221ENST00000641573 PYM1Q9BRP8 204 aaKnown RBP14.79□□□□□ -0.04
PHGDH-221ENST00000641573 HOMER2Q9NSB8 354 aa14.79□□□□□ -0.04
PHGDH-221ENST00000641573 RNF146Q9NTX7 359 aa14.79□□□□□ -0.04
PHGDH-221ENST00000641573 USP25Q9UHP3 1055 aa14.79□□□□□ -0.04
PHGDH-221ENST00000641573 RLFQ13129 1914 aa14.78□□□□□ -0.04
PHGDH-221ENST00000641573 LOC285556D6RIA3 1793 aa14.78□□□□□ -0.04
PHGDH-221ENST00000641573 PP2D1A8MPX8 630 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms