RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 SPC25Q9HBM1 224 aa13.69□□□□□ -0.22
ERGIC3-220ENST00000640748 ORC3Q9UBD5 711 aaPredicted RBP13.69□□□□□ -0.22
ERGIC3-220ENST00000640748 CHD7Q9P2D1 2997 aa13.68□□□□□ -0.22
ERGIC3-220ENST00000640748 LRRC37A2A6NM11 1700 aa13.68□□□□□ -0.22
ERGIC3-220ENST00000640748 CCDC196A0A1B0GTZ2 297 aa13.68□□□□□ -0.22
ERGIC3-220ENST00000640748 TSPY2A6NKD2 308 aa13.68□□□□□ -0.22
ERGIC3-220ENST00000640748 PLA2G6O60733 806 aa13.68□□□□□ -0.22
ERGIC3-220ENST00000640748 ACRP10323 421 aa13.68□□□□□ -0.22
ERGIC3-220ENST00000640748 SMPD1P17405 629 aa13.68□□□□□ -0.22
ERGIC3-220ENST00000640748 CYP2C18P33260 490 aa13.68□□□□□ -0.22
ERGIC3-220ENST00000640748 SLC1A4P43007 532 aa13.68□□□□□ -0.22
ERGIC3-220ENST00000640748 NOVP48745 357 aa13.68□□□□□ -0.22
ERGIC3-220ENST00000640748 TNFAIP2Q03169 654 aa13.68□□□□□ -0.22
ERGIC3-220ENST00000640748 PPIGQ13427 754 aaKnown RBP eCLIP13.68□□□□□ -0.224e-8■■□□□ 11.4
ERGIC3-220ENST00000640748 PPP2R5BQ15173 497 aa13.68□□□□□ -0.22
ERGIC3-220ENST00000640748 RTN1Q16799 776 aa13.68□□□□□ -0.22
ERGIC3-220ENST00000640748 FOXD4L6Q3SYB3 417 aaPredicted RBP13.68□□□□□ -0.22
ERGIC3-220ENST00000640748 IFIT1BQ5T764 474 aaKnown RBP13.68□□□□□ -0.22
ERGIC3-220ENST00000640748 CXCL17Q6UXB2 119 aa13.68□□□□□ -0.22
ERGIC3-220ENST00000640748 FOXD4L3Q6VB84 417 aaPredicted RBP13.68□□□□□ -0.22
ERGIC3-220ENST00000640748 ZNF365Q70YC5 407 aa13.68□□□□□ -0.22
ERGIC3-220ENST00000640748 KCTD1Q719H9 257 aa13.68□□□□□ -0.22
ERGIC3-220ENST00000640748 FAM160B2Q86V87 743 aa13.68□□□□□ -0.22
ERGIC3-220ENST00000640748 ZNF654Q8IZM8 581 aa13.68□□□□□ -0.22
ERGIC3-220ENST00000640748 CHURC1Q8WUH1 139 aa13.68□□□□□ -0.22
ERGIC3-220ENST00000640748 VTI1AQ96AJ9 217 aa13.68□□□□□ -0.22
ERGIC3-220ENST00000640748 PURBQ96QR8 312 aaKnown RBP13.68□□□□□ -0.22
ERGIC3-220ENST00000640748 PPP1R12CQ9BZL4 782 aa13.68□□□□□ -0.22
ERGIC3-220ENST00000640748 ZSCAN16Q9H4T2 348 aaPredicted RBP13.68□□□□□ -0.22
ERGIC3-220ENST00000640748 PDGFCQ9NRA1 345 aa13.68□□□□□ -0.22
ERGIC3-220ENST00000640748 UMODL1Q5DID0 1318 aa13.67□□□□□ -0.22
ERGIC3-220ENST00000640748 CALM1P0DP23 149 aa13.67□□□□□ -0.22
ERGIC3-220ENST00000640748 CALM2P0DP24 149 aa13.67□□□□□ -0.22
ERGIC3-220ENST00000640748 CALM3P0DP25 149 aa13.67□□□□□ -0.22
ERGIC3-220ENST00000640748 FDPSP14324 419 aaKnown RBP13.67□□□□□ -0.22
ERGIC3-220ENST00000640748 NCLP19338 710 aaKnown RBP13.67□□□□□ -0.22
ERGIC3-220ENST00000640748 RXRAP19793 462 aa13.67□□□□□ -0.22
ERGIC3-220ENST00000640748 CDC27P30260 824 aa13.67□□□□□ -0.22
ERGIC3-220ENST00000640748 ADD1P35611 737 aaKnown RBP13.67□□□□□ -0.22
ERGIC3-220ENST00000640748 TKFCQ3LXA3 575 aa13.67□□□□□ -0.22
ERGIC3-220ENST00000640748 TAPT1Q6NXT6 567 aa13.67□□□□□ -0.22
ERGIC3-220ENST00000640748 CATIPQ7Z7H3 387 aa13.67□□□□□ -0.22
ERGIC3-220ENST00000640748 TLK2Q86UE8 772 aa13.67□□□□□ -0.22
ERGIC3-220ENST00000640748 TMEM199Q8N511 208 aa13.67□□□□□ -0.22
ERGIC3-220ENST00000640748 ENAHQ8N8S7 591 aaPredicted RBP13.67□□□□□ -0.22
ERGIC3-220ENST00000640748 VWCEQ96DN2 955 aa13.67□□□□□ -0.22
ERGIC3-220ENST00000640748 TRERF1Q96PN7 1200 aa13.67□□□□□ -0.22
ERGIC3-220ENST00000640748 MYL10Q9BUA6 226 aa13.67□□□□□ -0.22
ERGIC3-220ENST00000640748 CYP39A1Q9NYL5 469 aa13.67□□□□□ -0.22
ERGIC3-220ENST00000640748 CXXC1Q9P0U4 656 aaPredicted RBP13.67□□□□□ -0.22
ERGIC3-220ENST00000640748 PRR12Q9ULL5 1215 aa13.67□□□□□ -0.22
ERGIC3-220ENST00000640748 STK36Q9NRP7 1315 aa13.66□□□□□ -0.22
ERGIC3-220ENST00000640748 ASB14A6NK59 587 aa13.66□□□□□ -0.22
ERGIC3-220ENST00000640748 ALAS1P13196 640 aa13.66□□□□□ -0.22
ERGIC3-220ENST00000640748 FOSBP53539 338 aa13.66□□□□□ -0.22
ERGIC3-220ENST00000640748 SSRP1Q08945 709 aaKnown RBP13.66□□□□□ -0.22
ERGIC3-220ENST00000640748 RESTQ13127 1097 aa13.66□□□□□ -0.22
ERGIC3-220ENST00000640748 GSE1Q14687 1217 aa13.66□□□□□ -0.22
ERGIC3-220ENST00000640748 FSCN1Q16658 493 aaKnown RBP13.66□□□□□ -0.22
ERGIC3-220ENST00000640748 KLHL40Q2TBA0 621 aa13.66□□□□□ -0.22
ERGIC3-220ENST00000640748 RCSD1Q6JBY9 416 aa13.66□□□□□ -0.22
ERGIC3-220ENST00000640748 CCDC174Q6PII3 467 aa13.66□□□□□ -0.22
ERGIC3-220ENST00000640748 FERMT3Q86UX7 667 aa13.66□□□□□ -0.22
ERGIC3-220ENST00000640748 FBXO16Q8IX29 292 aaPredicted RBP13.66□□□□□ -0.22
ERGIC3-220ENST00000640748 TMEM87AQ8NBN3 555 aa13.66□□□□□ -0.22
ERGIC3-220ENST00000640748 MORC4Q8TE76 937 aa13.66□□□□□ -0.22
ERGIC3-220ENST00000640748 HERVK_113Q902F9 699 aa13.66□□□□□ -0.22
ERGIC3-220ENST00000640748 CHAMP1Q96JM3 812 aa13.66□□□□□ -0.22
ERGIC3-220ENST00000640748 C8orf76Q96K31 380 aa13.66□□□□□ -0.22
ERGIC3-220ENST00000640748 IL23AQ9NPF7 189 aa13.66□□□□□ -0.22
ERGIC3-220ENST00000640748 PRDM6Q9NQX0 595 aa13.66□□□□□ -0.22
ERGIC3-220ENST00000640748 FAM217BQ9NTX9 383 aaPredicted RBP13.66□□□□□ -0.22
ERGIC3-220ENST00000640748 ISY1Q9ULR0 285 aaKnown RBP13.66□□□□□ -0.22
ERGIC3-220ENST00000640748 STX8Q9UNK0 236 aa13.66□□□□□ -0.22
ERGIC3-220ENST00000640748 LCTP09848 1927 aa13.66□□□□□ -0.22
ERGIC3-220ENST00000640748 TLR3O15455 904 aaKnown RBP13.65□□□□□ -0.22
ERGIC3-220ENST00000640748 DDAH1O94760 285 aa13.65□□□□□ -0.22
ERGIC3-220ENST00000640748 MBD3O95983 291 aa13.65□□□□□ -0.22
ERGIC3-220ENST00000640748 IFNAR1P17181 557 aa13.65□□□□□ -0.22
ERGIC3-220ENST00000640748 KRT85P78386 507 aa13.65□□□□□ -0.22
ERGIC3-220ENST00000640748 DNM1Q05193 864 aaKnown RBP13.65□□□□□ -0.22
ERGIC3-220ENST00000640748 IKQ13123 557 aaPredicted RBP13.65□□□□□ -0.22
ERGIC3-220ENST00000640748 ITGA7Q13683 1181 aa13.65□□□□□ -0.22
ERGIC3-220ENST00000640748 ADGRE1Q14246 886 aa13.65□□□□□ -0.22
ERGIC3-220ENST00000640748 NTRK3Q16288 839 aa13.65□□□□□ -0.22
ERGIC3-220ENST00000640748 PSRC1Q6PGN9 363 aaPredicted RBP13.65□□□□□ -0.22
ERGIC3-220ENST00000640748 EEPD1Q7L9B9 569 aa13.65□□□□□ -0.22
ERGIC3-220ENST00000640748 FANCBQ8NB91 859 aa13.65□□□□□ -0.22
ERGIC3-220ENST00000640748 WASF1Q92558 559 aa13.65□□□□□ -0.22
ERGIC3-220ENST00000640748 NOC4LQ9BVI4 516 aaKnown RBP13.65□□□□□ -0.22
ERGIC3-220ENST00000640748 TRPV6Q9H1D0 765 aa13.65□□□□□ -0.22
ERGIC3-220ENST00000640748 TCP11L1Q9NUJ3 509 aa13.65□□□□□ -0.22
ERGIC3-220ENST00000640748 RBM28Q9NW13 759 aaKnown RBP13.65□□□□□ -0.22
ERGIC3-220ENST00000640748 DYNC1LI2O43237 492 aaPredicted RBP13.64□□□□□ -0.23
ERGIC3-220ENST00000640748 B4GALT4O60513 344 aa13.64□□□□□ -0.23
ERGIC3-220ENST00000640748 PPFIA3O75145 1194 aa13.64□□□□□ -0.23
ERGIC3-220ENST00000640748 CABYRO75952 493 aa13.64□□□□□ -0.23
ERGIC3-220ENST00000640748 ICAM1P05362 532 aa13.64□□□□□ -0.23
ERGIC3-220ENST00000640748 PSMC6P62333 389 aa13.64□□□□□ -0.23
ERGIC3-220ENST00000640748 IQSEC1Q6DN90 963 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms