RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 GMCL1P1Q8NEA9 526 aa9.18□□□□□ -0.94
SCARB2-220ENST00000640076 ARMC2Q8NEN0 867 aa9.18□□□□□ -0.94
SCARB2-220ENST00000640076 RASGRP4Q8TDF6 673 aa9.18□□□□□ -0.94
SCARB2-220ENST00000640076 MAF1Q9H063 256 aa9.18□□□□□ -0.94
SCARB2-220ENST00000640076 ZNF408Q9H9D4 720 aa9.18□□□□□ -0.94
SCARB2-220ENST00000640076 PICK1Q9NRD5 415 aa9.18□□□□□ -0.94
SCARB2-220ENST00000640076 MAD2L2Q9UI95 211 aa9.18□□□□□ -0.94
SCARB2-220ENST00000640076 TMX2Q9Y320 296 aa9.18□□□□□ -0.94
SCARB2-220ENST00000640076 PHIPQ8WWQ0 1821 aa9.17□□□□□ -0.94
SCARB2-220ENST00000640076 F5H6K3 240 aa9.17□□□□□ -0.94
SCARB2-220ENST00000640076 PPFIA3O75145 1194 aa9.17□□□□□ -0.94
SCARB2-220ENST00000640076 PLEKHA8P1O95397 391 aa9.17□□□□□ -0.94
SCARB2-220ENST00000640076 PTPRAP18433 802 aa9.17□□□□□ -0.94
SCARB2-220ENST00000640076 CTHP32929 405 aa9.17□□□□□ -0.94
SCARB2-220ENST00000640076 HMGN5P82970 282 aaKnown RBP9.17□□□□□ -0.94
SCARB2-220ENST00000640076 KLRC3Q07444 240 aa9.17□□□□□ -0.94
SCARB2-220ENST00000640076 CBLBQ13191 982 aa9.17□□□□□ -0.94
SCARB2-220ENST00000640076 VGLL4Q14135 290 aa9.17□□□□□ -0.94
SCARB2-220ENST00000640076 MAP3K11Q16584 847 aa9.17□□□□□ -0.94
SCARB2-220ENST00000640076 PROX2Q3B8N5 592 aa9.17□□□□□ -0.94
SCARB2-220ENST00000640076 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.17□□□□□ -0.94
SCARB2-220ENST00000640076 CMTR1Q8N1G2 835 aaKnown RBP9.17□□□□□ -0.94
SCARB2-220ENST00000640076 STAG2Q8N3U4 1231 aa9.17□□□□□ -0.94
SCARB2-220ENST00000640076 DDX11Q96FC9 970 aa9.17□□□□□ -0.94
SCARB2-220ENST00000640076 MYH6P13533 1939 aa9.17□□□□□ -0.94
SCARB2-220ENST00000640076 KLRF2D3W0D1 207 aa9.17□□□□□ -0.94
SCARB2-220ENST00000640076 NDUFB10O96000 172 aa9.17□□□□□ -0.94
SCARB2-220ENST00000640076 PARP1P09874 1014 aaKnown RBP9.17□□□□□ -0.94
SCARB2-220ENST00000640076 FDPSP14324 419 aaKnown RBP9.17□□□□□ -0.94
SCARB2-220ENST00000640076 IREB2P48200 963 aaKnown RBP9.17□□□□□ -0.94
SCARB2-220ENST00000640076 GNAQP50148 359 aa9.17□□□□□ -0.94
SCARB2-220ENST00000640076 USP4Q13107 963 aa9.17□□□□□ -0.94
SCARB2-220ENST00000640076 ASPRV1Q53RT3 343 aa9.17□□□□□ -0.94
SCARB2-220ENST00000640076 MOB2Q70IA6 237 aa9.17□□□□□ -0.94
SCARB2-220ENST00000640076 NBPF11Q86T75 865 aa9.17□□□□□ -0.94
SCARB2-220ENST00000640076 SRBD1Q8N5C6 995 aaKnown RBP9.17□□□□□ -0.94
SCARB2-220ENST00000640076 PRPF38AQ8NAV1 312 aaKnown RBP9.17□□□□□ -0.94
SCARB2-220ENST00000640076 PHKBQ93100 1093 aa9.17□□□□□ -0.94
SCARB2-220ENST00000640076 GMCL1Q96IK5 515 aa9.17□□□□□ -0.94
SCARB2-220ENST00000640076 WDR18Q9BV38 432 aa9.17□□□□□ -0.94
SCARB2-220ENST00000640076 C12orf49Q9H741 205 aa9.17□□□□□ -0.94
SCARB2-220ENST00000640076 SH2D4AQ9H788 454 aa9.17□□□□□ -0.94
SCARB2-220ENST00000640076 FANCLQ9NW38 375 aa9.17□□□□□ -0.94
SCARB2-220ENST00000640076 SNTG2Q9NY99 539 aa9.17□□□□□ -0.94
SCARB2-220ENST00000640076 SNCAIPQ9Y6H5 919 aa9.17□□□□□ -0.94
SCARB2-220ENST00000640076 STK36Q9NRP7 1315 aa9.16□□□□□ -0.94
SCARB2-220ENST00000640076 GOLGA8HP0CJ92 632 aa9.16□□□□□ -0.94
SCARB2-220ENST00000640076 CHMP4BP1P59074 171 aa9.16□□□□□ -0.94
SCARB2-220ENST00000640076 ZNF543Q08ER8 600 aa9.16□□□□□ -0.94
SCARB2-220ENST00000640076 SLC35G1Q2M3R5 365 aa9.16□□□□□ -0.94
SCARB2-220ENST00000640076 ARSHQ5FYA8 562 aa9.16□□□□□ -0.94
SCARB2-220ENST00000640076 GPATCH4Q5T3I0 446 aaKnown RBP9.16□□□□□ -0.94
SCARB2-220ENST00000640076 SLFN13Q68D06 897 aa9.16□□□□□ -0.94
SCARB2-220ENST00000640076 DCAF4Q8WV16 495 aa9.16□□□□□ -0.94
SCARB2-220ENST00000640076 SEC16BQ96JE7 1060 aa9.16□□□□□ -0.94
SCARB2-220ENST00000640076 USB1Q9BQ65 265 aaKnown RBP9.16□□□□□ -0.94
SCARB2-220ENST00000640076 KIAA1683Q9H0B3 1180 aa9.16□□□□□ -0.94
SCARB2-220ENST00000640076 STIM2Q9P246 746 aa9.16□□□□□ -0.94
SCARB2-220ENST00000640076 ORC3Q9UBD5 711 aaPredicted RBP9.16□□□□□ -0.94
SCARB2-220ENST00000640076 CSADQ9Y600 493 aa9.16□□□□□ -0.94
SCARB2-220ENST00000640076 FRMPD2Q68DX3 1309 aaPredicted RBP9.16□□□□□ -0.94
SCARB2-220ENST00000640076 CNTNAP5Q8WYK1 1306 aa9.16□□□□□ -0.94
SCARB2-220ENST00000640076 CYTH3O43739 400 aa9.15□□□□□ -0.94
SCARB2-220ENST00000640076 ITGBL1O95965 494 aaPredicted RBP9.15□□□□□ -0.94
SCARB2-220ENST00000640076 SSBP05455 408 aaKnown RBP eCLIP9.15□□□□□ -0.94
SCARB2-220ENST00000640076 SYT1P21579 422 aa9.15□□□□□ -0.94
SCARB2-220ENST00000640076 SLC1A4P43007 532 aa9.15□□□□□ -0.94
SCARB2-220ENST00000640076 SSRP1Q08945 709 aaKnown RBP9.15□□□□□ -0.94
SCARB2-220ENST00000640076 SPP2Q13103 211 aa9.15□□□□□ -0.94
SCARB2-220ENST00000640076 CCDC96Q2M329 555 aa9.15□□□□□ -0.94
SCARB2-220ENST00000640076 KIAA1755Q5JYT7 1200 aa9.15□□□□□ -0.94
SCARB2-220ENST00000640076 ARMC9Q7Z3E5 817 aa9.15□□□□□ -0.94
SCARB2-220ENST00000640076 FERMT3Q86UX7 667 aa9.15□□□□□ -0.94
SCARB2-220ENST00000640076 TRIM22Q8IYM9 498 aa9.15□□□□□ -0.94
SCARB2-220ENST00000640076 SPICE1Q8N0Z3 855 aa9.15□□□□□ -0.94
SCARB2-220ENST00000640076 FAM184AQ8NB25 1140 aa9.15□□□□□ -0.94
SCARB2-220ENST00000640076 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.15□□□□□ -0.94
SCARB2-220ENST00000640076 ZNF280CQ8ND82 737 aa9.15□□□□□ -0.94
SCARB2-220ENST00000640076 FEZ1Q99689 392 aa9.15□□□□□ -0.94
SCARB2-220ENST00000640076 LZTS2Q9BRK4 669 aa9.15□□□□□ -0.94
SCARB2-220ENST00000640076 ARHGAP9Q9BRR9 750 aa9.15□□□□□ -0.94
SCARB2-220ENST00000640076 SLC26A6Q9BXS9 759 aa9.15□□□□□ -0.94
SCARB2-220ENST00000640076 RNF26Q9BY78 433 aaPredicted RBP9.15□□□□□ -0.94
SCARB2-220ENST00000640076 VCPKMTQ9H867 229 aa9.15□□□□□ -0.94
SCARB2-220ENST00000640076 AS3MTQ9HBK9 375 aa9.15□□□□□ -0.94
SCARB2-220ENST00000640076 CHMP5Q9NZZ3 219 aa9.15□□□□□ -0.94
SCARB2-220ENST00000640076 UBE2Q2LH0YL09 131 aa9.15□□□□□ -0.95
SCARB2-220ENST00000640076 PDCP20941 246 aa9.15□□□□□ -0.95
SCARB2-220ENST00000640076 SMARCA1P28370 1054 aa9.15□□□□□ -0.95
SCARB2-220ENST00000640076 PKP1Q13835 747 aa9.15□□□□□ -0.95
SCARB2-220ENST00000640076 ZYXQ15942 572 aaKnown RBP9.15□□□□□ -0.95
SCARB2-220ENST00000640076 ZFYVE27Q5T4F4 411 aa9.15□□□□□ -0.95
SCARB2-220ENST00000640076 KCTD1Q719H9 257 aa9.15□□□□□ -0.95
SCARB2-220ENST00000640076 KHSRPQ92945 711 aaKnown RBP eCLIP9.15□□□□□ -0.95
SCARB2-220ENST00000640076 CLMNQ96JQ2 1002 aa9.15□□□□□ -0.95
SCARB2-220ENST00000640076 NUP88Q99567 741 aaPredicted RBP9.15□□□□□ -0.95
SCARB2-220ENST00000640076 SPZ1Q9BXG8 430 aa9.15□□□□□ -0.95
SCARB2-220ENST00000640076 CPVLQ9H3G5 476 aa9.15□□□□□ -0.95
SCARB2-220ENST00000640076 KIF3AQ9Y496 699 aa9.15□□□□□ -0.95
SCARB2-220ENST00000640076 ZHX2Q9Y6X8 837 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms