RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 PPP1R1BQ9UD71 204 aaPredicted RBP7.67□□□□□ -1.18
CCDC7-216ENST00000640058 SASH1O94885 1247 aa7.66□□□□□ -1.18
CCDC7-216ENST00000640058 CTSWP56202 376 aa7.66□□□□□ -1.18
CCDC7-216ENST00000640058 VWA3BQ502W6 1294 aa7.66□□□□□ -1.18
CCDC7-216ENST00000640058 DDX11Q96FC9 970 aa7.66□□□□□ -1.18
CCDC7-216ENST00000640058 C20orf173Q96LM9 149 aa7.66□□□□□ -1.18
CCDC7-216ENST00000640058 SYT3Q9BQG1 590 aa7.66□□□□□ -1.18
CCDC7-216ENST00000640058 A0A0G2JLL6 359 aaPredicted RBP7.65□□□□□ -1.18
CCDC7-216ENST00000640058 OTOL1A6NHN0 477 aaPredicted RBP7.65□□□□□ -1.18
CCDC7-216ENST00000640058 GTF2A2P52657 109 aa7.65□□□□□ -1.18
CCDC7-216ENST00000640058 CACNB2Q08289 660 aaPredicted RBP7.65□□□□□ -1.18
CCDC7-216ENST00000640058 SLC35F1Q5T1Q4 408 aa7.65□□□□□ -1.18
CCDC7-216ENST00000640058 USP53Q70EK8 1073 aa7.65□□□□□ -1.18
CCDC7-216ENST00000640058 KCTD13Q8WZ19 329 aa7.65□□□□□ -1.18
CCDC7-216ENST00000640058 SEC14L1Q92503 715 aa7.65□□□□□ -1.18
CCDC7-216ENST00000640058 TANGO6Q9C0B7 1094 aa7.65□□□□□ -1.18
CCDC7-216ENST00000640058 CLDND1Q9NY35 253 aa7.65□□□□□ -1.18
CCDC7-216ENST00000640058 PALD1Q9ULE6 856 aa7.65□□□□□ -1.18
CCDC7-216ENST00000640058 COA3Q9Y2R0 106 aaPredicted RBP7.65□□□□□ -1.18
CCDC7-216ENST00000640058 CCDC85CA6NKD9 419 aa7.64□□□□□ -1.19
CCDC7-216ENST00000640058 KRTAP9-7A8MTY7 169 aa7.64□□□□□ -1.19
CCDC7-216ENST00000640058 CAPNS1P04632 268 aa7.64□□□□□ -1.19
CCDC7-216ENST00000640058 C8BP07358 591 aa7.64□□□□□ -1.19
CCDC7-216ENST00000640058 HTRA3P83110 453 aa7.64□□□□□ -1.19
CCDC7-216ENST00000640058 LSAMPQ13449 338 aa7.64□□□□□ -1.19
CCDC7-216ENST00000640058 HSP90AA2PQ14568 343 aaPredicted RBP7.64□□□□□ -1.19
CCDC7-216ENST00000640058 MROH9Q5TGP6 573 aa7.64□□□□□ -1.19
CCDC7-216ENST00000640058 MILR1Q7Z6M3 343 aa7.64□□□□□ -1.19
CCDC7-216ENST00000640058 SP8Q8IXZ3 490 aa7.64□□□□□ -1.19
CCDC7-216ENST00000640058 CKAP2LQ8IYA6 745 aa7.64□□□□□ -1.19
CCDC7-216ENST00000640058 FAM26EQ8N5C1 309 aa7.64□□□□□ -1.19
CCDC7-216ENST00000640058 ZNF526Q8TF50 670 aaPredicted RBP7.64□□□□□ -1.19
CCDC7-216ENST00000640058 AARSD1Q9BTE6 412 aaKnown RBP7.64□□□□□ -1.19
CCDC7-216ENST00000640058 X6R8D5 127 aa7.64□□□□□ -1.19
CCDC7-216ENST00000640058 PRODHO43272 600 aa7.63□□□□□ -1.19
CCDC7-216ENST00000640058 DLX3O60479 287 aa7.63□□□□□ -1.19
CCDC7-216ENST00000640058 RBM10P98175 930 aaKnown RBP7.63□□□□□ -1.19
CCDC7-216ENST00000640058 MAP4K2Q12851 820 aa7.63□□□□□ -1.19
CCDC7-216ENST00000640058 SMAD4Q13485 552 aaKnown RBP7.63□□□□□ -1.19
CCDC7-216ENST00000640058 TESK1Q15569 626 aa7.63□□□□□ -1.19
CCDC7-216ENST00000640058 ETV3LQ6ZN32 361 aa7.63□□□□□ -1.19
CCDC7-216ENST00000640058 RIOX2Q8IUF8 465 aa7.63□□□□□ -1.19
CCDC7-216ENST00000640058 Q8N1Y9 231 aa7.63□□□□□ -1.19
CCDC7-216ENST00000640058 CPA5Q8WXQ8 436 aa7.63□□□□□ -1.19
CCDC7-216ENST00000640058 SPATA25Q9BR10 227 aa7.63□□□□□ -1.19
CCDC7-216ENST00000640058 XYLT2Q9H1B5 865 aa7.63□□□□□ -1.19
CCDC7-216ENST00000640058 ARHGEF4Q9NR80 690 aa7.63□□□□□ -1.19
CCDC7-216ENST00000640058 ADAMTS20P59510 1910 aa7.62□□□□□ -1.19
CCDC7-216ENST00000640058 U2SURPO15042 1029 aaKnown RBP7.62□□□□□ -1.19
CCDC7-216ENST00000640058 MSCO60682 206 aa7.62□□□□□ -1.19
CCDC7-216ENST00000640058 CYP2C8P10632 490 aa7.62□□□□□ -1.19
CCDC7-216ENST00000640058 STAT5AP42229 794 aa7.62□□□□□ -1.19
CCDC7-216ENST00000640058 SLC6A11P48066 632 aa7.62□□□□□ -1.19
CCDC7-216ENST00000640058 SLURP1P55000 103 aa7.62□□□□□ -1.19
CCDC7-216ENST00000640058 YOD1Q5VVQ6 348 aaPredicted RBP7.62□□□□□ -1.19
CCDC7-216ENST00000640058 CD300LDQ6UXZ3 194 aa7.62□□□□□ -1.19
CCDC7-216ENST00000640058 STK32CQ86UX6 486 aa7.62□□□□□ -1.19
CCDC7-216ENST00000640058 ZBTB8AQ96BR9 441 aa7.62□□□□□ -1.19
CCDC7-216ENST00000640058 PHF20Q9BVI0 1012 aa7.62□□□□□ -1.19
CCDC7-216ENST00000640058 LUC7LQ9NQ29 371 aaKnown RBP7.62□□□□□ -1.19
CCDC7-216ENST00000640058 PPARGC1AQ9UBK2 798 aaKnown RBP7.62□□□□□ -1.19
CCDC7-216ENST00000640058 RAPGEFL1Q9UHV5 662 aa7.62□□□□□ -1.19
CCDC7-216ENST00000640058 BLACEA4D250 179 aa7.61□□□□□ -1.19
CCDC7-216ENST00000640058 IQCA1LA6NCM1 817 aa7.61□□□□□ -1.19
CCDC7-216ENST00000640058 ATP2B1P20020 1258 aa7.61□□□□□ -1.19
CCDC7-216ENST00000640058 DLX2Q07687 328 aaPredicted RBP7.61□□□□□ -1.19
CCDC7-216ENST00000640058 LIPIQ6XZB0 460 aa7.61□□□□□ -1.19
CCDC7-216ENST00000640058 SAPCD2Q86UD0 394 aa7.61□□□□□ -1.19
CCDC7-216ENST00000640058 ST13P5Q8NFI4 369 aaPredicted RBP7.61□□□□□ -1.19
CCDC7-216ENST00000640058 SGSM3Q96HU1 749 aa7.61□□□□□ -1.19
CCDC7-216ENST00000640058 GORASP1Q9BQQ3 440 aa7.61□□□□□ -1.19
CCDC7-216ENST00000640058 ADAM7Q9H2U9 754 aa7.61□□□□□ -1.19
CCDC7-216ENST00000640058 H7BY64 318 aa7.6□□□□□ -1.19
CCDC7-216ENST00000640058 GTF2F1P35269 517 aaKnown RBP eCLIP7.6□□□□□ -1.19
CCDC7-216ENST00000640058 KCNC1P48547 511 aa7.6□□□□□ -1.19
CCDC7-216ENST00000640058 CAP1Q01518 475 aa7.6□□□□□ -1.19
CCDC7-216ENST00000640058 STEAP3Q658P3 488 aa7.6□□□□□ -1.19
CCDC7-216ENST00000640058 KCNT2Q6UVM3 1135 aa7.6□□□□□ -1.19
CCDC7-216ENST00000640058 SPATC1Q76KD6 591 aa7.6□□□□□ -1.19
CCDC7-216ENST00000640058 YIPF4Q9BSR8 244 aa7.6□□□□□ -1.19
CCDC7-216ENST00000640058 PFDN2Q9UHV9 154 aa7.6□□□□□ -1.19
CCDC7-216ENST00000640058 NPFFR2Q9Y5X5 522 aa7.6□□□□□ -1.19
CCDC7-216ENST00000640058 NSMFQ6X4W1 530 aa7.59□□□□□ -1.19
CCDC7-216ENST00000640058 MIB1Q86YT6 1006 aa7.59□□□□□ -1.19
CCDC7-216ENST00000640058 FAM126BQ8IXS8 530 aa7.59□□□□□ -1.19
CCDC7-216ENST00000640058 LRRC47Q8N1G4 583 aaKnown RBP7.59□□□□□ -1.19
CCDC7-216ENST00000640058 OSBP2Q969R2 916 aa7.59□□□□□ -1.19
CCDC7-216ENST00000640058 JAM3Q9BX67 310 aa7.59□□□□□ -1.19
CCDC7-216ENST00000640058 GPR27Q9NS67 375 aa7.59□□□□□ -1.19
CCDC7-216ENST00000640058 SPATA6Q9NWH7 488 aaPredicted RBP7.59□□□□□ -1.19
CCDC7-216ENST00000640058 PCDHB4Q9Y5E5 795 aa7.59□□□□□ -1.19
CCDC7-216ENST00000640058 TRAV20A0A0B4J274 112 aa7.58□□□□□ -1.2
CCDC7-216ENST00000640058 HGSO14964 777 aaPredicted RBP7.58□□□□□ -1.2
CCDC7-216ENST00000640058 DGKIO75912 1065 aa7.58□□□□□ -1.2
CCDC7-216ENST00000640058 PABPC1P11940 636 aaKnown RBP7.58□□□□□ -1.2
CCDC7-216ENST00000640058 NFIXQ14938 502 aa7.58□□□□□ -1.2
CCDC7-216ENST00000640058 NTRK3Q16288 839 aa7.58□□□□□ -1.2
CCDC7-216ENST00000640058 NT5DC1Q5TFE4 455 aa7.58□□□□□ -1.2
CCDC7-216ENST00000640058 ZC3H18Q86VM9 953 aaKnown RBP7.58□□□□□ -1.2
CCDC7-216ENST00000640058 ARRDC4Q8NCT1 418 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms