RNA–Protein interactions for RNA: ENST00000640011.1

PRKCH-228, Transcript of protein kinase C eta, humanhuman

TSL 5 BASIC

Gene PRKCH, Length 285 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-228ENST00000640011 FGD4Q96M96 766 aa7.41□□□□□ -1.22
PRKCH-228ENST00000640011 MPHOSPH6Q99547 160 aaKnown RBP7.41□□□□□ -1.22
PRKCH-228ENST00000640011 CLIP2Q9UDT6 1046 aa7.41□□□□□ -1.22
PRKCH-228ENST00000640011 EXOC6BQ9Y2D4 811 aa7.41□□□□□ -1.22
PRKCH-228ENST00000640011 TNKSO95271 1327 aa7.41□□□□□ -1.22
PRKCH-228ENST00000640011 REV3LO60673 3130 aa7.4□□□□□ -1.22
PRKCH-228ENST00000640011 NKRFO15226 690 aaKnown RBP eCLIP7.4□□□□□ -1.22
PRKCH-228ENST00000640011 PRKAB2O43741 272 aa7.4□□□□□ -1.22
PRKCH-228ENST00000640011 PLA2G6O60733 806 aa7.4□□□□□ -1.22
PRKCH-228ENST00000640011 RAB11FIP3O75154 756 aa7.4□□□□□ -1.22
PRKCH-228ENST00000640011 HMMRO75330 724 aa7.4□□□□□ -1.22
PRKCH-228ENST00000640011 IQCF3P0C7M6 154 aa7.4□□□□□ -1.22
PRKCH-228ENST00000640011 BMP3P12645 472 aa7.4□□□□□ -1.22
PRKCH-228ENST00000640011 SMPD1P17405 629 aa7.4□□□□□ -1.22
PRKCH-228ENST00000640011 ATP5JP18859 108 aa7.4□□□□□ -1.22
PRKCH-228ENST00000640011 GNAT2P19087 354 aa7.4□□□□□ -1.22
PRKCH-228ENST00000640011 RASA1P20936 1047 aa7.4□□□□□ -1.22
PRKCH-228ENST00000640011 KCNJ6P48051 423 aa7.4□□□□□ -1.22
PRKCH-228ENST00000640011 PURAQ00577 322 aaKnown RBP7.4□□□□□ -1.22
PRKCH-228ENST00000640011 GRB10Q13322 594 aa7.4□□□□□ -1.22
PRKCH-228ENST00000640011 LEXMQ3ZCV2 418 aa7.4□□□□□ -1.22
PRKCH-228ENST00000640011 DUSP28Q4G0W2 176 aa7.4□□□□□ -1.22
PRKCH-228ENST00000640011 DIEXFQ68CQ4 756 aaKnown RBP7.4□□□□□ -1.22
PRKCH-228ENST00000640011 KIAA1211Q6ZU35 1233 aa7.4□□□□□ -1.22
PRKCH-228ENST00000640011 DEFB128Q7Z7B8 93 aa7.4□□□□□ -1.22
PRKCH-228ENST00000640011 GJD3Q8N144 294 aa7.4□□□□□ -1.22
PRKCH-228ENST00000640011 CAGE1Q8TC20 777 aa7.4□□□□□ -1.22
PRKCH-228ENST00000640011 NUP88Q99567 741 aaPredicted RBP7.4□□□□□ -1.22
PRKCH-228ENST00000640011 FTOQ9C0B1 505 aaKnown RBP eCLIP7.4□□□□□ -1.22
PRKCH-228ENST00000640011 C11orf16Q9NQ32 467 aa7.4□□□□□ -1.22
PRKCH-228ENST00000640011 A1CFQ9NQ94 594 aaKnown RBP7.4□□□□□ -1.22
PRKCH-228ENST00000640011 HOMER2Q9NSB8 354 aa7.4□□□□□ -1.22
PRKCH-228ENST00000640011 RNF146Q9NTX7 359 aa7.4□□□□□ -1.22
PRKCH-228ENST00000640011 ADD3Q9UEY8 706 aaKnown RBP7.4□□□□□ -1.22
PRKCH-228ENST00000640011 CTNNA3Q9UI47 895 aa7.4□□□□□ -1.22
PRKCH-228ENST00000640011 PNMA2Q9UL42 364 aa7.4□□□□□ -1.22
PRKCH-228ENST00000640011 NOD1Q9Y239 953 aa7.4□□□□□ -1.22
PRKCH-228ENST00000640011 FAM50BQ9Y247 325 aa7.4□□□□□ -1.22
PRKCH-228ENST00000640011 ASTN1O14525 1302 aa7.4□□□□□ -1.22
PRKCH-228ENST00000640011 ZNF536O15090 1300 aa7.4□□□□□ -1.22
PRKCH-228ENST00000640011 GRIN2DO15399 1336 aa7.4□□□□□ -1.22
PRKCH-228ENST00000640011 TRANK1O15050 2925 aa7.4□□□□□ -1.23
PRKCH-228ENST00000640011 ZNFX1Q9P2E3 1918 aaKnown RBP7.39□□□□□ -1.23
PRKCH-228ENST00000640011 CYP2D7A0A087X1C5 515 aa7.39□□□□□ -1.23
PRKCH-228ENST00000640011 IGKV6D-41A0A0C4DH26 115 aa7.39□□□□□ -1.23
PRKCH-228ENST00000640011 B4DLN1 442 aa7.39□□□□□ -1.23
PRKCH-228ENST00000640011 RFXAPO00287 272 aa7.39□□□□□ -1.23
PRKCH-228ENST00000640011 SLC3A2P08195 630 aaKnown RBP7.39□□□□□ -1.23
PRKCH-228ENST00000640011 SLC1A4P43007 532 aa7.39□□□□□ -1.23
PRKCH-228ENST00000640011 MRE11P49959 708 aa7.39□□□□□ -1.23
PRKCH-228ENST00000640011 MRPL12P52815 198 aaKnown RBP7.39□□□□□ -1.23
PRKCH-228ENST00000640011 CNTN2Q02246 1040 aa7.39□□□□□ -1.23
PRKCH-228ENST00000640011 IKQ13123 557 aaPredicted RBP7.39□□□□□ -1.23
PRKCH-228ENST00000640011 SLFN13Q68D06 897 aa7.39□□□□□ -1.23
PRKCH-228ENST00000640011 DESI1Q6ICB0 168 aa7.39□□□□□ -1.23
PRKCH-228ENST00000640011 TAPT1Q6NXT6 567 aa7.39□□□□□ -1.23
PRKCH-228ENST00000640011 LYPD8Q6UX82 237 aa7.39□□□□□ -1.23
PRKCH-228ENST00000640011 MORC4Q8TE76 937 aa7.39□□□□□ -1.23
PRKCH-228ENST00000640011 STAG1Q8WVM7 1258 aa7.39□□□□□ -1.23
PRKCH-228ENST00000640011 ZNF516Q92618 1163 aa7.39□□□□□ -1.23
PRKCH-228ENST00000640011 GMCL1Q96IK5 515 aa7.39□□□□□ -1.23
PRKCH-228ENST00000640011 TRERF1Q96PN7 1200 aa7.39□□□□□ -1.23
PRKCH-228ENST00000640011 MTRQ99707 1265 aa7.39□□□□□ -1.23
PRKCH-228ENST00000640011 HAUS7Q99871 368 aa7.39□□□□□ -1.23
PRKCH-228ENST00000640011 MTG1Q9BT17 334 aaPredicted RBP7.39□□□□□ -1.23
PRKCH-228ENST00000640011 CERS4Q9HA82 394 aa7.39□□□□□ -1.23
PRKCH-228ENST00000640011 IL1RAPL2Q9NP60 686 aa7.39□□□□□ -1.23
PRKCH-228ENST00000640011 TRMT13Q9NUP7 481 aaKnown RBP7.39□□□□□ -1.23
PRKCH-228ENST00000640011 MTMR4Q9NYA4 1195 aa7.39□□□□□ -1.23
PRKCH-228ENST00000640011 PARP14Q460N5 1801 aa7.38□□□□□ -1.23
PRKCH-228ENST00000640011 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.38□□□□□ -1.23
PRKCH-228ENST00000640011 FAM86C2PA6NEL3 165 aa7.38□□□□□ -1.23
PRKCH-228ENST00000640011 EPOPA6NHQ4 379 aa7.38□□□□□ -1.23
PRKCH-228ENST00000640011 TMEM232C9JQI7 657 aa7.38□□□□□ -1.23
PRKCH-228ENST00000640011 LPXNO60711 386 aa7.38□□□□□ -1.23
PRKCH-228ENST00000640011 CYP2C9P11712 490 aa7.38□□□□□ -1.23
PRKCH-228ENST00000640011 ALAS1P13196 640 aa7.38□□□□□ -1.23
PRKCH-228ENST00000640011 ABL2P42684 1182 aa7.38□□□□□ -1.23
PRKCH-228ENST00000640011 PSMC6P62333 389 aa7.38□□□□□ -1.23
PRKCH-228ENST00000640011 PDE4BQ07343 736 aa7.38□□□□□ -1.23
PRKCH-228ENST00000640011 NR6A1Q15406 480 aa7.38□□□□□ -1.23
PRKCH-228ENST00000640011 PTPROQ16827 1216 aa7.38□□□□□ -1.23
PRKCH-228ENST00000640011 FAM47CQ5HY64 1035 aa7.38□□□□□ -1.23
PRKCH-228ENST00000640011 FBXO16Q8IX29 292 aaPredicted RBP7.38□□□□□ -1.23
PRKCH-228ENST00000640011 FAM178BQ8IXR5 827 aa7.38□□□□□ -1.23
PRKCH-228ENST00000640011 AFAP1L1Q8TED9 768 aa7.38□□□□□ -1.23
PRKCH-228ENST00000640011 VWCEQ96DN2 955 aa7.38□□□□□ -1.23
PRKCH-228ENST00000640011 CEP95Q96GE4 821 aa7.38□□□□□ -1.23
PRKCH-228ENST00000640011 UIMC1Q96RL1 719 aa7.38□□□□□ -1.23
PRKCH-228ENST00000640011 TGS1Q96RS0 853 aaKnown RBP7.38□□□□□ -1.23
PRKCH-228ENST00000640011 RAD9AQ99638 391 aa7.38□□□□□ -1.23
PRKCH-228ENST00000640011 WDR11Q9BZH6 1224 aa7.38□□□□□ -1.23
PRKCH-228ENST00000640011 UPF3BQ9BZI7 483 aaKnown RBP7.38□□□□□ -1.23
PRKCH-228ENST00000640011 BOLA2Q9H3K6 86 aa7.38□□□□□ -1.23
PRKCH-228ENST00000640011 CHMP4BQ9H444 224 aaKnown RBP7.38□□□□□ -1.23
PRKCH-228ENST00000640011 UBE2ZQ9H832 354 aaPredicted RBP7.38□□□□□ -1.23
PRKCH-228ENST00000640011 PRDM9Q9NQV7 894 aa7.38□□□□□ -1.23
PRKCH-228ENST00000640011 CYP39A1Q9NYL5 469 aa7.38□□□□□ -1.23
PRKCH-228ENST00000640011 PRKAG3Q9UGI9 489 aa7.38□□□□□ -1.23
PRKCH-228ENST00000640011 ISY1Q9ULR0 285 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms