RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 RHBDD1Q8TEB9 315 aa8.71□□□□□ -1.02
NECAP1-220ENST00000639841 ZSCAN10Q96SZ4 725 aaPredicted RBP8.71□□□□□ -1.02
NECAP1-220ENST00000639841 MAPK9P45984 424 aa8.7□□□□□ -1.02
NECAP1-220ENST00000639841 PLA2G4AP47712 749 aa8.7□□□□□ -1.02
NECAP1-220ENST00000639841 PPP2R2AP63151 447 aa8.7□□□□□ -1.02
NECAP1-220ENST00000639841 SUMO1P63165 101 aaKnown RBP8.7□□□□□ -1.02
NECAP1-220ENST00000639841 FAM133BQ5BKY9 247 aaKnown RBP8.7□□□□□ -1.02
NECAP1-220ENST00000639841 FAM180BQ6P0A1 224 aa8.7□□□□□ -1.02
NECAP1-220ENST00000639841 CWC25Q9NXE8 425 aaPredicted RBP8.7□□□□□ -1.02
NECAP1-220ENST00000639841 NDOR1Q9UHB4 597 aa8.7□□□□□ -1.02
NECAP1-220ENST00000639841 RTL1A6NKG5 1358 aa8.7□□□□□ -1.02
NECAP1-220ENST00000639841 ROCK2O75116 1388 aaKnown RBP8.7□□□□□ -1.02
NECAP1-220ENST00000639841 ANKRD36BQ8N2N9 1353 aa8.7□□□□□ -1.02
NECAP1-220ENST00000639841 TLR5O60602 858 aa8.7□□□□□ -1.02
NECAP1-220ENST00000639841 TRPA1O75762 1119 aa8.7□□□□□ -1.02
NECAP1-220ENST00000639841 GRIA2P42262 883 aa8.7□□□□□ -1.02
NECAP1-220ENST00000639841 PDE1CQ14123 709 aaPredicted RBP8.7□□□□□ -1.02
NECAP1-220ENST00000639841 NBPF1Q3BBV0 1214 aa8.7□□□□□ -1.02
NECAP1-220ENST00000639841 DUSP27Q5VZP5 1158 aa8.7□□□□□ -1.02
NECAP1-220ENST00000639841 GIMAP8Q8ND71 665 aaPredicted RBP8.7□□□□□ -1.02
NECAP1-220ENST00000639841 OSBP2Q969R2 916 aa8.7□□□□□ -1.02
NECAP1-220ENST00000639841 IPO9Q96P70 1041 aaKnown RBP8.7□□□□□ -1.02
NECAP1-220ENST00000639841 PDLIM7Q9NR12 457 aa8.7□□□□□ -1.02
NECAP1-220ENST00000639841 A0A1B0GVC2 190 aa8.69□□□□□ -1.02
NECAP1-220ENST00000639841 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.69□□□□□ -1.02
NECAP1-220ENST00000639841 CAPNS1P04632 268 aa8.69□□□□□ -1.02
NECAP1-220ENST00000639841 CAPN3P20807 821 aa8.69□□□□□ -1.02
NECAP1-220ENST00000639841 FAM193AP78312 1265 aa8.69□□□□□ -1.02
NECAP1-220ENST00000639841 RPL6Q02878 288 aaKnown RBP8.69□□□□□ -1.02
NECAP1-220ENST00000639841 RSPH1Q8WYR4 309 aa8.69□□□□□ -1.02
NECAP1-220ENST00000639841 HSPBAP1Q96EW2 488 aa8.69□□□□□ -1.02
NECAP1-220ENST00000639841 PPM1MQ96MI6 270 aa8.69□□□□□ -1.02
NECAP1-220ENST00000639841 SMOC1Q9H4F8 434 aa8.69□□□□□ -1.02
NECAP1-220ENST00000639841 KMT5AQ9NQR1 393 aa8.69□□□□□ -1.02
NECAP1-220ENST00000639841 GPN3Q9UHW5 284 aaPredicted RBP8.69□□□□□ -1.02
NECAP1-220ENST00000639841 NUB1Q9Y5A7 615 aa8.69□□□□□ -1.02
NECAP1-220ENST00000639841 TPP1O14773 563 aa8.68□□□□□ -1.02
NECAP1-220ENST00000639841 ADH1AP07327 375 aa8.68□□□□□ -1.02
NECAP1-220ENST00000639841 CHKAP35790 457 aa8.68□□□□□ -1.02
NECAP1-220ENST00000639841 HSP90AA2PQ14568 343 aaPredicted RBP8.68□□□□□ -1.02
NECAP1-220ENST00000639841 LRRFIP1Q32MZ4 808 aaKnown RBP8.68□□□□□ -1.02
NECAP1-220ENST00000639841 CFAP100Q494V2 611 aa8.68□□□□□ -1.02
NECAP1-220ENST00000639841 SV2CQ496J9 727 aa8.68□□□□□ -1.02
NECAP1-220ENST00000639841 IQSEC1Q6DN90 963 aa8.68□□□□□ -1.02
NECAP1-220ENST00000639841 C1orf162Q8NEQ5 155 aaPredicted RBP8.68□□□□□ -1.02
NECAP1-220ENST00000639841 OR2W6PQ8NHA6 318 aa8.68□□□□□ -1.02
NECAP1-220ENST00000639841 SLC35G2Q8TBE7 412 aa8.68□□□□□ -1.02
NECAP1-220ENST00000639841 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.68□□□□□ -1.02
NECAP1-220ENST00000639841 TAAR9Q96RI9 348 aa8.68□□□□□ -1.02
NECAP1-220ENST00000639841 ZNF576Q9H609 170 aa8.68□□□□□ -1.02
NECAP1-220ENST00000639841 ALG13Q9NP73 1137 aaKnown RBP8.68□□□□□ -1.02
NECAP1-220ENST00000639841 C1orf112Q9NSG2 853 aa8.68□□□□□ -1.02
NECAP1-220ENST00000639841 SHANK3Q9BYB0 1731 aa8.68□□□□□ -1.02
NECAP1-220ENST00000639841 FAM86C2PA6NEL3 165 aa8.68□□□□□ -1.02
NECAP1-220ENST00000639841 AGRPO00253 132 aa8.68□□□□□ -1.02
NECAP1-220ENST00000639841 NR3C2P08235 984 aa8.68□□□□□ -1.02
NECAP1-220ENST00000639841 PABPC1P11940 636 aaKnown RBP8.68□□□□□ -1.02
NECAP1-220ENST00000639841 ADCYAP1R1P41586 468 aa8.68□□□□□ -1.02
NECAP1-220ENST00000639841 ZNF157P51786 506 aaPredicted RBP8.68□□□□□ -1.02
NECAP1-220ENST00000639841 HTRA3P83110 453 aa8.68□□□□□ -1.02
NECAP1-220ENST00000639841 SLC9A5Q14940 896 aa8.68□□□□□ -1.02
NECAP1-220ENST00000639841 CDCA2Q69YH5 1023 aaPredicted RBP8.68□□□□□ -1.02
NECAP1-220ENST00000639841 TMEM214Q6NUQ4 689 aaKnown RBP8.68□□□□□ -1.02
NECAP1-220ENST00000639841 NAXEQ8NCW5 288 aa8.68□□□□□ -1.02
NECAP1-220ENST00000639841 GRIN3AQ8TCU5 1115 aa8.68□□□□□ -1.02
NECAP1-220ENST00000639841 STK35Q8TDR2 534 aa8.68□□□□□ -1.02
NECAP1-220ENST00000639841 TSPAN18Q96SJ8 248 aa8.68□□□□□ -1.02
NECAP1-220ENST00000639841 SLC9A7Q96T83 725 aa8.68□□□□□ -1.02
NECAP1-220ENST00000639841 OSMRQ99650 979 aa8.68□□□□□ -1.02
NECAP1-220ENST00000639841 LGR4Q9BXB1 951 aa8.68□□□□□ -1.02
NECAP1-220ENST00000639841 RRN3Q9NYV6 651 aa8.68□□□□□ -1.02
NECAP1-220ENST00000639841 TLL2Q9Y6L7 1015 aa8.68□□□□□ -1.02
NECAP1-220ENST00000639841 SMG6Q86US8 1419 aaKnown RBP8.68□□□□□ -1.02
NECAP1-220ENST00000639841 KIF24Q5T7B8 1368 aa8.67□□□□□ -1.02
NECAP1-220ENST00000639841 WASHC2AQ641Q2 1341 aa8.67□□□□□ -1.02
NECAP1-220ENST00000639841 ZNF891A8MT65 544 aaPredicted RBP8.67□□□□□ -1.02
NECAP1-220ENST00000639841 PCDHGA12O60330 932 aa8.67□□□□□ -1.02
NECAP1-220ENST00000639841 MYBP10242 640 aa8.67□□□□□ -1.02
NECAP1-220ENST00000639841 NCAM1P13591 858 aa8.67□□□□□ -1.02
NECAP1-220ENST00000639841 IGFALSP35858 605 aa8.67□□□□□ -1.02
NECAP1-220ENST00000639841 PLA2G4EQ3MJ16 856 aa8.67□□□□□ -1.02
NECAP1-220ENST00000639841 OVOS1Q6IE37 1185 aa8.67□□□□□ -1.02
NECAP1-220ENST00000639841 MYLK4Q86YV6 388 aaPredicted RBP8.67□□□□□ -1.02
NECAP1-220ENST00000639841 ANKK1Q8NFD2 765 aa8.67□□□□□ -1.02
NECAP1-220ENST00000639841 CCT6BQ92526 530 aa8.67□□□□□ -1.02
NECAP1-220ENST00000639841 IP6K1Q92551 441 aa8.67□□□□□ -1.02
NECAP1-220ENST00000639841 FAXDC2Q96IV6 333 aa8.67□□□□□ -1.02
NECAP1-220ENST00000639841 TMEM87BQ96K49 555 aa8.67□□□□□ -1.02
NECAP1-220ENST00000639841 NUP88Q99567 741 aaPredicted RBP8.67□□□□□ -1.02
NECAP1-220ENST00000639841 SMYD2Q9NRG4 433 aa8.67□□□□□ -1.02
NECAP1-220ENST00000639841 RASSF1Q9NS23 344 aa8.67□□□□□ -1.02
NECAP1-220ENST00000639841 BLOC1S4Q9NUP1 217 aa8.67□□□□□ -1.02
NECAP1-220ENST00000639841 TFCP2L1Q9NZI6 479 aa8.67□□□□□ -1.02
NECAP1-220ENST00000639841 PCDHGA9Q9Y5G4 932 aaKnown RBP8.67□□□□□ -1.02
NECAP1-220ENST00000639841 PCDHGA8Q9Y5G5 932 aa8.67□□□□□ -1.02
NECAP1-220ENST00000639841 PCDHGA7Q9Y5G6 932 aa8.67□□□□□ -1.02
NECAP1-220ENST00000639841 PCDHGA6Q9Y5G7 932 aa8.67□□□□□ -1.02
NECAP1-220ENST00000639841 PCDHGA3Q9Y5H0 932 aa8.67□□□□□ -1.02
NECAP1-220ENST00000639841 PCDHGA2Q9Y5H1 932 aa8.67□□□□□ -1.02
NECAP1-220ENST00000639841 PLEKHG2Q9H7P9 1386 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms