RNA–Protein interactions for RNA: ENST00000638759.1

KCNMA1-245, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 3,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-245ENST00000638759 SPIRE1Q08AE8 756 aa11.68□□□□□ -0.54
KCNMA1-245ENST00000638759 TRIM32Q13049 653 aa11.68□□□□□ -0.54
KCNMA1-245ENST00000638759 NBR1Q14596 966 aa11.68□□□□□ -0.54
KCNMA1-245ENST00000638759 MYSM1Q5VVJ2 828 aa11.68□□□□□ -0.54
KCNMA1-245ENST00000638759 FAM173BQ6P4H8 233 aa11.68□□□□□ -0.54
KCNMA1-245ENST00000638759 PIK3AP1Q6ZUJ8 805 aa11.68□□□□□ -0.54
KCNMA1-245ENST00000638759 PXYLP1Q8TE99 480 aa11.68□□□□□ -0.54
KCNMA1-245ENST00000638759 NR3C2P08235 984 aa11.67□□□□□ -0.54
KCNMA1-245ENST00000638759 CYBAP13498 195 aa11.67□□□□□ -0.54
KCNMA1-245ENST00000638759 KCTD2Q14681 263 aa11.67□□□□□ -0.54
KCNMA1-245ENST00000638759 INF2Q27J81 1249 aa11.67□□□□□ -0.54
KCNMA1-245ENST00000638759 XRRA1Q6P2D8 792 aa11.67□□□□□ -0.54
KCNMA1-245ENST00000638759 NSUN6Q8TEA1 469 aaKnown RBP11.67□□□□□ -0.54
KCNMA1-245ENST00000638759 NUDT12Q9BQG2 462 aa11.67□□□□□ -0.54
KCNMA1-245ENST00000638759 FTOQ9C0B1 505 aaKnown RBP eCLIP11.67□□□□□ -0.54
KCNMA1-245ENST00000638759 PTPN22Q9Y2R2 807 aa11.67□□□□□ -0.54
KCNMA1-245ENST00000638759 TNPO2O14787 897 aaKnown RBP11.67□□□□□ -0.54
KCNMA1-245ENST00000638759 CTAGE5O15320 804 aa11.67□□□□□ -0.54
KCNMA1-245ENST00000638759 TDP2O95551 362 aa11.67□□□□□ -0.54
KCNMA1-245ENST00000638759 ARMCX2Q7L311 632 aa11.67□□□□□ -0.54
KCNMA1-245ENST00000638759 BRAPQ7Z569 592 aa11.67□□□□□ -0.54
KCNMA1-245ENST00000638759 TINF2Q9BSI4 451 aa11.67□□□□□ -0.54
KCNMA1-245ENST00000638759 BCAS3Q9H6U6 928 aa11.67□□□□□ -0.54
KCNMA1-245ENST00000638759 TELO2Q9Y4R8 837 aa11.67□□□□□ -0.54
KCNMA1-245ENST00000638759 PCDHB6Q9Y5E3 794 aa11.67□□□□□ -0.54
KCNMA1-245ENST00000638759 POTEB2H3BUK9 544 aa11.67□□□□□ -0.54
KCNMA1-245ENST00000638759 XBP1P17861 261 aa11.67□□□□□ -0.54
KCNMA1-245ENST00000638759 RGS2P41220 211 aa11.67□□□□□ -0.54
KCNMA1-245ENST00000638759 TRAPPC10P48553 1259 aa11.67□□□□□ -0.54
KCNMA1-245ENST00000638759 EIF2AK2P19525 551 aaKnown RBP11.66□□□□□ -0.54
KCNMA1-245ENST00000638759 NASPP49321 788 aaPredicted RBP11.66□□□□□ -0.54
KCNMA1-245ENST00000638759 NONOQ15233 471 aaKnown RBP eCLIP11.66□□□□□ -0.54
KCNMA1-245ENST00000638759 TMEM60Q9H2L4 133 aa11.66□□□□□ -0.54
KCNMA1-245ENST00000638759 JADE2Q9NQC1 790 aa11.66□□□□□ -0.54
KCNMA1-245ENST00000638759 KIF3AQ9Y496 699 aa11.66□□□□□ -0.54
KCNMA1-245ENST00000638759 SPATA31C2B4DYI2 1134 aa11.66□□□□□ -0.54
KCNMA1-245ENST00000638759 KCNA2P16389 499 aa11.66□□□□□ -0.54
KCNMA1-245ENST00000638759 LBX1P52954 281 aa11.66□□□□□ -0.54
KCNMA1-245ENST00000638759 PRMT2P55345 433 aa11.66□□□□□ -0.54
KCNMA1-245ENST00000638759 UBXN2AP68543 259 aa11.66□□□□□ -0.54
KCNMA1-245ENST00000638759 FCHSD1Q86WN1 690 aa11.66□□□□□ -0.54
KCNMA1-245ENST00000638759 MXRA8Q9BRK3 442 aa11.66□□□□□ -0.54
KCNMA1-245ENST00000638759 ZSCAN16Q9H4T2 348 aaPredicted RBP11.66□□□□□ -0.54
KCNMA1-245ENST00000638759 ITGB3BPQ13352 177 aaPredicted RBP11.65□□□□□ -0.54
KCNMA1-245ENST00000638759 FERMT3Q86UX7 667 aa11.65□□□□□ -0.54
KCNMA1-245ENST00000638759 WDR11Q9BZH6 1224 aa11.65□□□□□ -0.54
KCNMA1-245ENST00000638759 GNEQ9Y223 722 aaKnown RBP11.65□□□□□ -0.54
KCNMA1-245ENST00000638759 ATP9AO75110 1047 aa11.65□□□□□ -0.54
KCNMA1-245ENST00000638759 STAM2O75886 525 aa11.65□□□□□ -0.54
KCNMA1-245ENST00000638759 PTGS1P23219 599 aa11.65□□□□□ -0.54
KCNMA1-245ENST00000638759 NEK8Q86SG6 692 aa11.65□□□□□ -0.54
KCNMA1-245ENST00000638759 PDGFCQ9NRA1 345 aa11.65□□□□□ -0.54
KCNMA1-245ENST00000638759 VAV3Q9UKW4 847 aa11.65□□□□□ -0.54
KCNMA1-245ENST00000638759 PTCH2Q9Y6C5 1203 aa11.65□□□□□ -0.54
KCNMA1-245ENST00000638759 ARP10275 920 aa11.65□□□□□ -0.54
KCNMA1-245ENST00000638759 ORC2Q13416 577 aaPredicted RBP11.65□□□□□ -0.54
KCNMA1-245ENST00000638759 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.65□□□□□ -0.54
KCNMA1-245ENST00000638759 CTDP1Q9Y5B0 961 aaPredicted RBP11.65□□□□□ -0.54
KCNMA1-245ENST00000638759 CLIC4Q9Y696 253 aa11.65□□□□□ -0.54
KCNMA1-245ENST00000638759 MRVI1Q9Y6F6 885 aa11.65□□□□□ -0.54
KCNMA1-245ENST00000638759 EIF3JO75822 258 aaKnown RBP11.64□□□□□ -0.55
KCNMA1-245ENST00000638759 HOXD8P13378 290 aaPredicted RBP11.64□□□□□ -0.55
KCNMA1-245ENST00000638759 CTCFP49711 727 aaPredicted RBP11.64□□□□□ -0.55
KCNMA1-245ENST00000638759 SLC5A5Q92911 643 aa11.64□□□□□ -0.55
KCNMA1-245ENST00000638759 USP28Q96RU2 1077 aa11.64□□□□□ -0.55
KCNMA1-245ENST00000638759 PRDM10Q9NQV6 1147 aa11.64□□□□□ -0.55
KCNMA1-245ENST00000638759 NRBP1Q9UHY1 535 aa11.64□□□□□ -0.55
KCNMA1-245ENST00000638759 LOXHD1Q8IVV2 1947 aa11.64□□□□□ -0.55
KCNMA1-245ENST00000638759 SCN10AQ9Y5Y9 1956 aa11.64□□□□□ -0.55
KCNMA1-245ENST00000638759 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.64□□□□□ -0.55
KCNMA1-245ENST00000638759 VPS37CA5D8V6 355 aaPredicted RBP11.64□□□□□ -0.55
KCNMA1-245ENST00000638759 MSH4O15457 936 aa11.64□□□□□ -0.55
KCNMA1-245ENST00000638759 ATP2C1P98194 919 aaPredicted RBP11.64□□□□□ -0.55
KCNMA1-245ENST00000638759 CACNB2Q08289 660 aaPredicted RBP11.64□□□□□ -0.55
KCNMA1-245ENST00000638759 TRIM29Q14134 588 aa11.64□□□□□ -0.55
KCNMA1-245ENST00000638759 CEP55Q53EZ4 464 aa11.64□□□□□ -0.55
KCNMA1-245ENST00000638759 ZFP91Q96JP5 570 aaPredicted RBP11.64□□□□□ -0.55
KCNMA1-245ENST00000638759 AGO4Q9HCK5 861 aaKnown RBP11.64□□□□□ -0.55
KCNMA1-245ENST00000638759 POLR3EQ9NVU0 708 aa11.64□□□□□ -0.55
KCNMA1-245ENST00000638759 TNRC18O15417 2968 aaPredicted RBP11.64□□□□□ -0.55
KCNMA1-245ENST00000638759 ALPK3Q96L96 1907 aa11.64□□□□□ -0.55
KCNMA1-245ENST00000638759 CYP2B6P20813 491 aa11.64□□□□□ -0.55
KCNMA1-245ENST00000638759 ARHGEF16Q5VV41 709 aa11.64□□□□□ -0.55
KCNMA1-245ENST00000638759 POTEDQ86YR6 584 aa11.64□□□□□ -0.55
KCNMA1-245ENST00000638759 EMID1Q96A84 441 aaPredicted RBP11.64□□□□□ -0.55
KCNMA1-245ENST00000638759 RTEL1Q9NZ71 1219 aa11.64□□□□□ -0.55
KCNMA1-245ENST00000638759 ADD3Q9UEY8 706 aaKnown RBP11.64□□□□□ -0.55
KCNMA1-245ENST00000638759 SPDYE3A6NKU9 549 aa11.63□□□□□ -0.55
KCNMA1-245ENST00000638759 PSMD10O75832 226 aa11.63□□□□□ -0.55
KCNMA1-245ENST00000638759 GPRASP2Q96D09 838 aa11.63□□□□□ -0.55
KCNMA1-245ENST00000638759 VTA1Q9NP79 307 aa11.63□□□□□ -0.55
KCNMA1-245ENST00000638759 ASB14A6NK59 587 aa11.63□□□□□ -0.55
KCNMA1-245ENST00000638759 CYP2C19P33261 490 aa11.63□□□□□ -0.55
KCNMA1-245ENST00000638759 RILPL1Q5EBL4 403 aa11.63□□□□□ -0.55
KCNMA1-245ENST00000638759 FBXO16Q8IX29 292 aaPredicted RBP11.63□□□□□ -0.55
KCNMA1-245ENST00000638759 DDX41Q9UJV9 622 aaKnown RBP11.63□□□□□ -0.55
KCNMA1-245ENST00000638759 SIP14410 1827 aa11.63□□□□□ -0.55
KCNMA1-245ENST00000638759 ELNP15502 786 aa11.63□□□□□ -0.55
KCNMA1-245ENST00000638759 CCND2P30279 289 aa11.63□□□□□ -0.55
KCNMA1-245ENST00000638759 LHX8Q68G74 356 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms