RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 POLR2BP30876 1174 aaKnown RBP20.1■□□□□ 0.81
SCARB2-213ENST00000638680 LARGE2Q8N3Y3 721 aa20.1■□□□□ 0.81
SCARB2-213ENST00000638680 POMGNT1Q8WZA1 660 aa20.1■□□□□ 0.81
SCARB2-213ENST00000638680 SPECC1L-ADORA2AF8WAN1 911 aa20.09■□□□□ 0.81
SCARB2-213ENST00000638680 RNF8O76064 485 aa20.09■□□□□ 0.81
SCARB2-213ENST00000638680 AOC3Q16853 763 aa20.09■□□□□ 0.81
SCARB2-213ENST00000638680 ZBTB8OSQ8IWT0 167 aa20.09■□□□□ 0.81
SCARB2-213ENST00000638680 NME8Q8N427 588 aa20.09■□□□□ 0.81
SCARB2-213ENST00000638680 WHAMMQ8TF30 809 aa20.09■□□□□ 0.81
SCARB2-213ENST00000638680 CDKL2Q92772 493 aa20.09■□□□□ 0.81
SCARB2-213ENST00000638680 DDX17Q92841 729 aaKnown RBP20.09■□□□□ 0.81
SCARB2-213ENST00000638680 PGBD1Q96JS3 809 aa20.09■□□□□ 0.81
SCARB2-213ENST00000638680 HAUS2Q9NVX0 235 aa20.09■□□□□ 0.81
SCARB2-213ENST00000638680 PCDHA1Q9Y5I3 950 aa20.09■□□□□ 0.81
SCARB2-213ENST00000638680 UBAP1LF5GYI3 381 aa20.09■□□□□ 0.81
SCARB2-213ENST00000638680 LRRN2O75325 713 aa20.09■□□□□ 0.81
SCARB2-213ENST00000638680 KRT3P12035 628 aa20.09■□□□□ 0.81
SCARB2-213ENST00000638680 LLGL1Q15334 1064 aa20.09■□□□□ 0.81
SCARB2-213ENST00000638680 NT5C1BQ96P26 610 aa20.09■□□□□ 0.81
SCARB2-213ENST00000638680 AP1M1Q9BXS5 423 aa20.09■□□□□ 0.81
SCARB2-213ENST00000638680 GFPT2O94808 682 aa20.09■□□□□ 0.81
SCARB2-213ENST00000638680 GNPTABQ3T906 1256 aa20.09■□□□□ 0.81
SCARB2-213ENST00000638680 CERKLQ49MI3 558 aaPredicted RBP20.09■□□□□ 0.81
SCARB2-213ENST00000638680 JADE1Q6IE81 842 aa20.09■□□□□ 0.81
SCARB2-213ENST00000638680 TMTC3Q6ZXV5 915 aa20.09■□□□□ 0.81
SCARB2-213ENST00000638680 FAM186BQ8IYM0 893 aa20.09■□□□□ 0.81
SCARB2-213ENST00000638680 ANKFY1Q9P2R3 1169 aa20.09■□□□□ 0.81
SCARB2-213ENST00000638680 SOS2Q07890 1332 aaPredicted RBP20.09■□□□□ 0.81
SCARB2-213ENST00000638680 ASPHQ12797 758 aa20.09■□□□□ 0.81
SCARB2-213ENST00000638680 TAF11Q15544 211 aa20.09■□□□□ 0.81
SCARB2-213ENST00000638680 LRGUKQ96M69 825 aa20.09■□□□□ 0.81
SCARB2-213ENST00000638680 SYNMO15061 1565 aa20.09■□□□□ 0.81
SCARB2-213ENST00000638680 GUCY2CP25092 1073 aa20.08■□□□□ 0.81
SCARB2-213ENST00000638680 KIF11P52732 1056 aa20.08■□□□□ 0.81
SCARB2-213ENST00000638680 PDCD7Q8N8D1 485 aaKnown RBP20.08■□□□□ 0.81
SCARB2-213ENST00000638680 PCDHB4Q9Y5E5 795 aa20.08■□□□□ 0.81
SCARB2-213ENST00000638680 KDM5CP41229 1560 aa20.08■□□□□ 0.81
SCARB2-213ENST00000638680 CAPN9O14815 690 aa20.08■□□□□ 0.81
SCARB2-213ENST00000638680 CLIC2O15247 247 aa20.08■□□□□ 0.81
SCARB2-213ENST00000638680 MFAP3LO75121 409 aa20.08■□□□□ 0.81
SCARB2-213ENST00000638680 SERPING1P05155 500 aa20.08■□□□□ 0.81
SCARB2-213ENST00000638680 PDZD8Q8NEN9 1154 aa20.08■□□□□ 0.81
SCARB2-213ENST00000638680 SPDL1Q96EA4 605 aa20.08■□□□□ 0.81
SCARB2-213ENST00000638680 IFT122Q9HBG6 1241 aa20.08■□□□□ 0.81
SCARB2-213ENST00000638680 IVNS1ABPQ9Y6Y0 642 aa20.08■□□□□ 0.81
SCARB2-213ENST00000638680 TMOD1P28289 359 aa20.08■□□□□ 0.81
SCARB2-213ENST00000638680 ADD2P35612 726 aa20.08■□□□□ 0.81
SCARB2-213ENST00000638680 H0YCG3 227 aa20.08■□□□□ 0.8
SCARB2-213ENST00000638680 POLD1P28340 1107 aa20.08■□□□□ 0.8
SCARB2-213ENST00000638680 PDE1BQ01064 536 aa20.08■□□□□ 0.8
SCARB2-213ENST00000638680 NLRP7Q8WX94 980 aa20.08■□□□□ 0.8
SCARB2-213ENST00000638680 PUS7LQ9H0K6 701 aaKnown RBP20.08■□□□□ 0.8
SCARB2-213ENST00000638680 MRPS25P82663 173 aaKnown RBP20.08■□□□□ 0.8
SCARB2-213ENST00000638680 FKBP3Q00688 224 aaKnown RBP20.08■□□□□ 0.8
SCARB2-213ENST00000638680 DLGAP5Q15398 846 aa20.08■□□□□ 0.8
SCARB2-213ENST00000638680 SLFN13Q68D06 897 aa20.08■□□□□ 0.8
SCARB2-213ENST00000638680 HIBCHQ6NVY1 386 aaPredicted RBP20.08■□□□□ 0.8
SCARB2-213ENST00000638680 N4BP2L2Q92802 583 aaPredicted RBP20.08■□□□□ 0.8
SCARB2-213ENST00000638680 AIFM3Q96NN9 605 aa20.08■□□□□ 0.8
SCARB2-213ENST00000638680 TXLNGQ9NUQ3 528 aa20.08■□□□□ 0.8
SCARB2-213ENST00000638680 NFU1Q9UMS0 254 aa20.08■□□□□ 0.8
SCARB2-213ENST00000638680 TMEM191BP0C7N4 346 aa20.07■□□□□ 0.8
SCARB2-213ENST00000638680 SCNN1DP51172 638 aa20.07■□□□□ 0.8
SCARB2-213ENST00000638680 SARM1Q6SZW1 724 aa20.07■□□□□ 0.8
SCARB2-213ENST00000638680 TMEM232C9JQI7 657 aa20.07■□□□□ 0.8
SCARB2-213ENST00000638680 ICA1Q05084 483 aa20.07■□□□□ 0.8
SCARB2-213ENST00000638680 KRT31Q15323 416 aa20.07■□□□□ 0.8
SCARB2-213ENST00000638680 TBCKQ8TEA7 893 aa20.07■□□□□ 0.8
SCARB2-213ENST00000638680 H0YIN7 160 aa20.07■□□□□ 0.8
SCARB2-213ENST00000638680 PFDN1O60925 122 aa20.07■□□□□ 0.8
SCARB2-213ENST00000638680 ECE1P42892 770 aa20.07■□□□□ 0.8
SCARB2-213ENST00000638680 MLXIPQ9HAP2 919 aa20.07■□□□□ 0.8
SCARB2-213ENST00000638680 MSH2P43246 934 aa20.07■□□□□ 0.8
SCARB2-213ENST00000638680 BPIFB4P59827 614 aa20.07■□□□□ 0.8
SCARB2-213ENST00000638680 NECTIN1Q15223 517 aa20.07■□□□□ 0.8
SCARB2-213ENST00000638680 HSP90AA5PQ58FG0 334 aa20.07■□□□□ 0.8
SCARB2-213ENST00000638680 MB21D1Q8N884 522 aa20.07■□□□□ 0.8
SCARB2-213ENST00000638680 OSBP2Q969R2 916 aa20.07■□□□□ 0.8
SCARB2-213ENST00000638680 GCNT4Q9P109 453 aa20.07■□□□□ 0.8
SCARB2-213ENST00000638680 ANKRD65E5RJM6 399 aa20.07■□□□□ 0.8
SCARB2-213ENST00000638680 MYL1P05976 194 aa20.07■□□□□ 0.8
SCARB2-213ENST00000638680 ITKQ08881 620 aa20.07■□□□□ 0.8
SCARB2-213ENST00000638680 KMT5BQ4FZB7 885 aa20.07■□□□□ 0.8
SCARB2-213ENST00000638680 PDZD4Q76G19 769 aaPredicted RBP20.07■□□□□ 0.8
SCARB2-213ENST00000638680 NEK9Q8TD19 979 aa20.07■□□□□ 0.8
SCARB2-213ENST00000638680 SMYD2Q9NRG4 433 aa20.07■□□□□ 0.8
SCARB2-213ENST00000638680 RASGRF2O14827 1237 aa20.06■□□□□ 0.8
SCARB2-213ENST00000638680 MX2P20592 715 aa20.06■□□□□ 0.8
SCARB2-213ENST00000638680 CCNE1P24864 410 aa20.06■□□□□ 0.8
SCARB2-213ENST00000638680 DYNLL1P63167 89 aaKnown RBP20.06■□□□□ 0.8
SCARB2-213ENST00000638680 PPP2R5AQ15172 486 aa20.06■□□□□ 0.8
SCARB2-213ENST00000638680 TRIP13Q15645 432 aaPredicted RBP20.06■□□□□ 0.8
SCARB2-213ENST00000638680 PRKAB2O43741 272 aa20.06■□□□□ 0.8
SCARB2-213ENST00000638680 MLH3Q9UHC1 1453 aa20.06■□□□□ 0.8
SCARB2-213ENST00000638680 HMGB1P1B2RPK0 211 aaPredicted RBP20.06■□□□□ 0.8
SCARB2-213ENST00000638680 DR1Q01658 176 aa20.06■□□□□ 0.8
SCARB2-213ENST00000638680 KRT26Q7Z3Y9 468 aa20.06■□□□□ 0.8
SCARB2-213ENST00000638680 FBXO41Q8TF61 875 aa20.06■□□□□ 0.8
SCARB2-213ENST00000638680 HESX1Q9UBX0 185 aa20.06■□□□□ 0.8
SCARB2-213ENST00000638680 LRRIQ4A6NIV6 560 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms