RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 CST5P28325 142 aaPredicted RBP25.04■■□□□ 1.6
SCN1B-206ENST00000638536 RBM25P49756 843 aaKnown RBP25.04■■□□□ 1.6
SCN1B-206ENST00000638536 NKX3-2P78367 333 aa25.04■■□□□ 1.6
SCN1B-206ENST00000638536 GNASQ5JWF2 1037 aa25.04■■□□□ 1.6
SCN1B-206ENST00000638536 RIC8AQ9NPQ8 531 aa25.04■■□□□ 1.6
SCN1B-206ENST00000638536 PFKFB2O60825 505 aa25.03■■□□□ 1.6
SCN1B-206ENST00000638536 ACLYP53396 1101 aa25.03■■□□□ 1.6
SCN1B-206ENST00000638536 NECAB1Q8N987 351 aa25.03■■□□□ 1.6
SCN1B-206ENST00000638536 PGBD1Q96JS3 809 aa25.03■■□□□ 1.6
SCN1B-206ENST00000638536 SLKQ9H2G2 1235 aaPredicted RBP25.03■■□□□ 1.6
SCN1B-206ENST00000638536 A0A1W2PQ45 241 aaPredicted RBP25.02■■□□□ 1.6
SCN1B-206ENST00000638536 A0A1W2PQY0 241 aa25.02■■□□□ 1.6
SCN1B-206ENST00000638536 ASGR1P07306 291 aa25.02■■□□□ 1.6
SCN1B-206ENST00000638536 ANKRD1Q15327 319 aa25.02■■□□□ 1.6
SCN1B-206ENST00000638536 PPP1R18Q6NYC8 613 aa25.02■■□□□ 1.6
SCN1B-206ENST00000638536 SLC39A5Q6ZMH5 540 aa25.02■■□□□ 1.6
SCN1B-206ENST00000638536 AIFM3Q96NN9 605 aa25.02■■□□□ 1.6
SCN1B-206ENST00000638536 TMEM260Q9NX78 707 aa25.02■■□□□ 1.6
SCN1B-206ENST00000638536 hCG_1984214I3L0E3 225 aa25.01■■□□□ 1.59
SCN1B-206ENST00000638536 CPLX1O14810 134 aa25.01■■□□□ 1.59
SCN1B-206ENST00000638536 EVI5O60447 810 aa25.01■■□□□ 1.59
SCN1B-206ENST00000638536 CTDNEP1O95476 244 aa25.01■■□□□ 1.59
SCN1B-206ENST00000638536 CCND2P30279 289 aa25.01■■□□□ 1.59
SCN1B-206ENST00000638536 TTLL4Q14679 1199 aa25.01■■□□□ 1.59
SCN1B-206ENST00000638536 FSCN1Q16658 493 aaKnown RBP25.01■■□□□ 1.59
SCN1B-206ENST00000638536 ZNF713Q8N859 430 aaPredicted RBP25.01■■□□□ 1.59
SCN1B-206ENST00000638536 TSEN34Q9BSV6 310 aaKnown RBP25.01■■□□□ 1.59
SCN1B-206ENST00000638536 AP5M1Q9H0R1 490 aa25.01■■□□□ 1.59
SCN1B-206ENST00000638536 SPC25Q9HBM1 224 aa25.01■■□□□ 1.59
SCN1B-206ENST00000638536 RTEL1Q9NZ71 1219 aa25.01■■□□□ 1.59
SCN1B-206ENST00000638536 PCDHA6Q9UN73 950 aa25.01■■□□□ 1.59
SCN1B-206ENST00000638536 Q9Y3F1 56 aa25.01■■□□□ 1.59
SCN1B-206ENST00000638536 PCDHA8Q9Y5H6 950 aa25.01■■□□□ 1.59
SCN1B-206ENST00000638536 ADCY7P51828 1080 aa25.01■■□□□ 1.59
SCN1B-206ENST00000638536 AKAP17AQ02040 695 aaKnown RBP25.01■■□□□ 1.59
SCN1B-206ENST00000638536 BCAS3Q9H6U6 928 aa25.01■■□□□ 1.59
SCN1B-206ENST00000638536 VPS54Q9P1Q0 977 aa25.01■■□□□ 1.59
SCN1B-206ENST00000638536 DDX41Q9UJV9 622 aaKnown RBP25.01■■□□□ 1.59
SCN1B-206ENST00000638536 CLK2P49760 499 aaKnown RBP25■■□□□ 1.59
SCN1B-206ENST00000638536 SP2Q02086 613 aa25■■□□□ 1.59
SCN1B-206ENST00000638536 SSRP1Q08945 709 aaKnown RBP25■■□□□ 1.59
SCN1B-206ENST00000638536 ST3GAL1Q11201 340 aa25■■□□□ 1.59
SCN1B-206ENST00000638536 C7orf61Q8IZ16 206 aa25■■□□□ 1.59
SCN1B-206ENST00000638536 OR6J1Q8NGC5 347 aa25■■□□□ 1.59
SCN1B-206ENST00000638536 H0YGN5 161 aa24.99■■□□□ 1.59
SCN1B-206ENST00000638536 SEMA3FQ13275 785 aa24.99■■□□□ 1.59
SCN1B-206ENST00000638536 CXCL17Q6UXB2 119 aa24.99■■□□□ 1.59
SCN1B-206ENST00000638536 ZMYND12Q9H0C1 365 aa24.99■■□□□ 1.59
SCN1B-206ENST00000638536 RBM27Q9P2N5 1060 aaKnown RBP24.99■■□□□ 1.59
SCN1B-206ENST00000638536 MOXD2PA6NHM9 499 aa24.98■■□□□ 1.59
SCN1B-206ENST00000638536 SORBS3O60504 671 aa24.98■■□□□ 1.59
SCN1B-206ENST00000638536 ARHGAP1Q07960 439 aa24.98■■□□□ 1.59
SCN1B-206ENST00000638536 PCNX4Q63HM2 1172 aa24.98■■□□□ 1.59
SCN1B-206ENST00000638536 PCSK9Q8NBP7 692 aaKnown RBP24.98■■□□□ 1.59
SCN1B-206ENST00000638536 MRVI1Q9Y6F6 885 aa24.98■■□□□ 1.59
SCN1B-206ENST00000638536 SPDYE3A6NKU9 549 aa24.97■■□□□ 1.59
SCN1B-206ENST00000638536 RTP1P59025 263 aa24.97■■□□□ 1.59
SCN1B-206ENST00000638536 INPP4AQ96PE3 977 aaPredicted RBP24.97■■□□□ 1.59
SCN1B-206ENST00000638536 NKRFO15226 690 aaKnown RBP eCLIP24.97■■□□□ 1.59
SCN1B-206ENST00000638536 SNX17Q15036 470 aa24.97■■□□□ 1.59
SCN1B-206ENST00000638536 TRIM60Q495X7 471 aa24.97■■□□□ 1.59
SCN1B-206ENST00000638536 JAKMIP3Q5VZ66 844 aa24.97■■□□□ 1.59
SCN1B-206ENST00000638536 TRIM22Q8IYM9 498 aa24.97■■□□□ 1.59
SCN1B-206ENST00000638536 RASGRP4Q8TDF6 673 aa24.97■■□□□ 1.59
SCN1B-206ENST00000638536 GTF3C6Q969F1 213 aa24.97■■□□□ 1.59
SCN1B-206ENST00000638536 STARD7Q9NQZ5 370 aa24.97■■□□□ 1.59
SCN1B-206ENST00000638536 ESYT2A0FGR8 921 aa24.96■■□□□ 1.59
SCN1B-206ENST00000638536 DEXIO95424 95 aa24.96■■□□□ 1.59
SCN1B-206ENST00000638536 ZMYND8Q9ULU4 1186 aaPredicted RBP24.96■■□□□ 1.59
SCN1B-206ENST00000638536 ATP11BQ9Y2G3 1177 aa24.96■■□□□ 1.59
SCN1B-206ENST00000638536 LAMA3Q16787 3333 aa24.95■■□□□ 1.58
SCN1B-206ENST00000638536 SYN1P17600 705 aa24.95■■□□□ 1.58
SCN1B-206ENST00000638536 CPLX2Q6PUV4 134 aaKnown RBP24.95■■□□□ 1.58
SCN1B-206ENST00000638536 AFG1LQ8WV93 481 aa24.95■■□□□ 1.58
SCN1B-206ENST00000638536 ANO3Q9BYT9 981 aa24.95■■□□□ 1.58
SCN1B-206ENST00000638536 BACH2Q9BYV9 841 aa24.95■■□□□ 1.58
SCN1B-206ENST00000638536 GJB4Q9NTQ9 266 aa24.95■■□□□ 1.58
SCN1B-206ENST00000638536 SCN10AQ9Y5Y9 1956 aa24.95■■□□□ 1.58
SCN1B-206ENST00000638536 GRIN2DO15399 1336 aa24.95■■□□□ 1.58
SCN1B-206ENST00000638536 A6NJR5 290 aa24.94■■□□□ 1.58
SCN1B-206ENST00000638536 GH1P01241 217 aa24.94■■□□□ 1.58
SCN1B-206ENST00000638536 FDPSP14324 419 aaKnown RBP24.94■■□□□ 1.58
SCN1B-206ENST00000638536 ITGB5P18084 799 aa24.94■■□□□ 1.58
SCN1B-206ENST00000638536 UBA1P22314 1058 aaKnown RBP24.94■■□□□ 1.58
SCN1B-206ENST00000638536 PSMC6P62333 389 aa24.94■■□□□ 1.58
SCN1B-206ENST00000638536 PPP1R13LQ8WUF5 828 aa24.94■■□□□ 1.58
SCN1B-206ENST00000638536 GLT1D1Q96MS3 346 aa24.94■■□□□ 1.58
SCN1B-206ENST00000638536 TBC1D32Q96NH3 1257 aa24.94■■□□□ 1.58
SCN1B-206ENST00000638536 TELO2Q9Y4R8 837 aa24.94■■□□□ 1.58
SCN1B-206ENST00000638536 SPATA31C2B4DYI2 1134 aa24.94■■□□□ 1.58
SCN1B-206ENST00000638536 ICAM3P32942 547 aa24.94■■□□□ 1.58
SCN1B-206ENST00000638536 PRPF38BQ5VTL8 546 aaKnown RBP24.94■■□□□ 1.58
SCN1B-206ENST00000638536 CYP2W1Q8TAV3 490 aa24.94■■□□□ 1.58
SCN1B-206ENST00000638536 VTI1AQ96AJ9 217 aa24.94■■□□□ 1.58
SCN1B-206ENST00000638536 C6orf50Q9HD87 102 aa24.94■■□□□ 1.58
SCN1B-206ENST00000638536 LIMCH1Q9UPQ0 1083 aa24.94■■□□□ 1.58
SCN1B-206ENST00000638536 MYL3P08590 195 aa24.93■■□□□ 1.58
SCN1B-206ENST00000638536 PURAQ00577 322 aaKnown RBP24.93■■□□□ 1.58
SCN1B-206ENST00000638536 TLE2Q04725 743 aa24.93■■□□□ 1.58
SCN1B-206ENST00000638536 NPY5RQ15761 445 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms