RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 PROCA1Q8NCQ7 364 aaPredicted RBP15.73■□□□□ 0.11
SCARB2-208ENST00000638372 UHMK1Q8TAS1 419 aaKnown RBP15.73■□□□□ 0.11
SCARB2-208ENST00000638372 ATF5Q9Y2D1 282 aaPredicted RBP15.73■□□□□ 0.11
SCARB2-208ENST00000638372 A0A0G2JLW4 131 aa15.72■□□□□ 0.11
SCARB2-208ENST00000638372 TRIM49BA6NDI0 452 aa15.72■□□□□ 0.11
SCARB2-208ENST00000638372 SFI1A8K8P3 1242 aa15.72■□□□□ 0.11
SCARB2-208ENST00000638372 hCG_1984214I3L0E3 225 aa15.72■□□□□ 0.11
SCARB2-208ENST00000638372 ZNF713Q8N859 430 aaPredicted RBP15.72■□□□□ 0.11
SCARB2-208ENST00000638372 MASTLQ96GX5 879 aa15.72■□□□□ 0.11
SCARB2-208ENST00000638372 STK36Q9NRP7 1315 aa15.72■□□□□ 0.11
SCARB2-208ENST00000638372 PP2D1A8MPX8 630 aa15.72■□□□□ 0.11
SCARB2-208ENST00000638372 MYL1P05976 194 aa15.72■□□□□ 0.11
SCARB2-208ENST00000638372 CRKP46108 304 aa15.72■□□□□ 0.11
SCARB2-208ENST00000638372 IGBP1P78318 339 aa15.72■□□□□ 0.11
SCARB2-208ENST00000638372 WDR11Q9BZH6 1224 aa15.72■□□□□ 0.11
SCARB2-208ENST00000638372 AFF2P51816 1311 aa15.72■□□□□ 0.11
SCARB2-208ENST00000638372 SEC31AO94979 1220 aaKnown RBP15.72■□□□□ 0.11
SCARB2-208ENST00000638372 SEPT2Q15019 361 aa15.72■□□□□ 0.11
SCARB2-208ENST00000638372 FAM133AQ8N9E0 248 aa15.72■□□□□ 0.11
SCARB2-208ENST00000638372 WDR19Q8NEZ3 1342 aa15.72■□□□□ 0.11
SCARB2-208ENST00000638372 DAPK3O43293 454 aa15.71■□□□□ 0.11
SCARB2-208ENST00000638372 EIF2AK2P19525 551 aaKnown RBP15.71■□□□□ 0.11
SCARB2-208ENST00000638372 CEP85LQ5SZL2 805 aa15.71■□□□□ 0.11
SCARB2-208ENST00000638372 ZBTB8OSQ8IWT0 167 aa15.71■□□□□ 0.11
SCARB2-208ENST00000638372 RABGGTAQ92696 567 aa15.71■□□□□ 0.11
SCARB2-208ENST00000638372 NDST4Q9H3R1 872 aa15.71■□□□□ 0.11
SCARB2-208ENST00000638372 SEPT9Q9UHD8 586 aaPredicted RBP15.71■□□□□ 0.11
SCARB2-208ENST00000638372 FERP16591 822 aa15.71■□□□□ 0.11
SCARB2-208ENST00000638372 CTNNA1P35221 906 aaKnown RBP15.71■□□□□ 0.11
SCARB2-208ENST00000638372 GUCY2DQ02846 1103 aa15.71■□□□□ 0.11
SCARB2-208ENST00000638372 CCDC93Q567U6 631 aa15.71■□□□□ 0.11
SCARB2-208ENST00000638372 SHC4Q6S5L8 630 aa15.71■□□□□ 0.11
SCARB2-208ENST00000638372 RETREG2Q8NC44 543 aa15.71■□□□□ 0.11
SCARB2-208ENST00000638372 PPP2R5DQ14738 602 aa15.71■□□□□ 0.11
SCARB2-208ENST00000638372 EEPD1Q7L9B9 569 aa15.71■□□□□ 0.11
SCARB2-208ENST00000638372 NACC1Q96RE7 527 aa15.71■□□□□ 0.11
SCARB2-208ENST00000638372 INO80Q9ULG1 1556 aaPredicted RBP15.71■□□□□ 0.11
SCARB2-208ENST00000638372 N4BP1O75113 896 aaKnown RBP15.71■□□□□ 0.1
SCARB2-208ENST00000638372 PRR29P0C7W0 189 aa15.71■□□□□ 0.1
SCARB2-208ENST00000638372 EIF4A3P38919 411 aaKnown RBP15.71■□□□□ 0.1
SCARB2-208ENST00000638372 ZBED6P86452 979 aa15.71■□□□□ 0.1
SCARB2-208ENST00000638372 CTTNQ14247 550 aaKnown RBP15.71■□□□□ 0.1
SCARB2-208ENST00000638372 CCDC144BQ3MJ40 725 aa15.71■□□□□ 0.1
SCARB2-208ENST00000638372 TCP11X2Q5H9J9 407 aa15.71■□□□□ 0.1
SCARB2-208ENST00000638372 STAG2Q8N3U4 1231 aa15.71■□□□□ 0.1
SCARB2-208ENST00000638372 RAB17Q9H0T7 212 aa15.71■□□□□ 0.1
SCARB2-208ENST00000638372 CLTCQ00610 1675 aaKnown RBP15.71■□□□□ 0.1
SCARB2-208ENST00000638372 NDUFA10O95299 355 aa15.7■□□□□ 0.1
SCARB2-208ENST00000638372 AFPP02771 609 aaKnown RBP15.7■□□□□ 0.1
SCARB2-208ENST00000638372 PSMC2P35998 433 aaKnown RBP15.7■□□□□ 0.1
SCARB2-208ENST00000638372 RFX5P48382 616 aaPredicted RBP15.7■□□□□ 0.1
SCARB2-208ENST00000638372 PDE6CP51160 858 aa15.7■□□□□ 0.1
SCARB2-208ENST00000638372 MESDQ14696 234 aa15.7■□□□□ 0.1
SCARB2-208ENST00000638372 TAF12Q16514 161 aa15.7■□□□□ 0.1
SCARB2-208ENST00000638372 ATP1A2P50993 1020 aa15.7■□□□□ 0.1
SCARB2-208ENST00000638372 MYL7Q01449 175 aa15.7■□□□□ 0.1
SCARB2-208ENST00000638372 SETDB1Q15047 1291 aa15.7■□□□□ 0.1
SCARB2-208ENST00000638372 TMEM179Q6ZVK1 233 aa15.7■□□□□ 0.1
SCARB2-208ENST00000638372 PIGOQ8TEQ8 1089 aa15.7■□□□□ 0.1
SCARB2-208ENST00000638372 CEP170P1Q96L14 293 aa15.7■□□□□ 0.1
SCARB2-208ENST00000638372 TMEM260Q9NX78 707 aa15.7■□□□□ 0.1
SCARB2-208ENST00000638372 CEMIPQ8WUJ3 1361 aa15.7■□□□□ 0.1
SCARB2-208ENST00000638372 UTYO14607 1347 aa15.7■□□□□ 0.1
SCARB2-208ENST00000638372 USP17L10C9JJH3 530 aa15.7■□□□□ 0.1
SCARB2-208ENST00000638372 SARM1Q6SZW1 724 aa15.7■□□□□ 0.1
SCARB2-208ENST00000638372 TTLL6Q8N841 843 aa15.7■□□□□ 0.1
SCARB2-208ENST00000638372 ALDH8A1Q9H2A2 487 aaPredicted RBP15.7■□□□□ 0.1
SCARB2-208ENST00000638372 CSF1RP07333 972 aa15.7■□□□□ 0.1
SCARB2-208ENST00000638372 ATF7P17544 494 aaPredicted RBP15.7■□□□□ 0.1
SCARB2-208ENST00000638372 KRT15P19012 456 aa15.7■□□□□ 0.1
SCARB2-208ENST00000638372 DCPSQ96C86 337 aaKnown RBP15.7■□□□□ 0.1
SCARB2-208ENST00000638372 SMC6Q96SB8 1091 aa15.7■□□□□ 0.1
SCARB2-208ENST00000638372 PLA2G12BQ9BX93 195 aa15.7■□□□□ 0.1
SCARB2-208ENST00000638372 ATP5DP30049 168 aa15.69■□□□□ 0.1
SCARB2-208ENST00000638372 YARSP54577 528 aaKnown RBP15.69■□□□□ 0.1
SCARB2-208ENST00000638372 ZNF772Q68DY9 489 aaPredicted RBP15.69■□□□□ 0.1
SCARB2-208ENST00000638372 DPY19L2Q6NUT2 758 aa15.69■□□□□ 0.1
SCARB2-208ENST00000638372 ATP6V0A1Q93050 837 aa15.69■□□□□ 0.1
SCARB2-208ENST00000638372 MMS19Q96T76 1030 aa15.69■□□□□ 0.1
SCARB2-208ENST00000638372 ADAMTS1Q9UHI8 967 aa15.69■□□□□ 0.1
SCARB2-208ENST00000638372 DLC1Q96QB1 1528 aa15.69■□□□□ 0.1
SCARB2-208ENST00000638372 MROH7-TTC4A0A0A0MT08 1334 aa15.69■□□□□ 0.1
SCARB2-208ENST00000638372 TMEM191BP0C7N4 346 aa15.69■□□□□ 0.1
SCARB2-208ENST00000638372 GPSM2P81274 684 aa15.69■□□□□ 0.1
SCARB2-208ENST00000638372 TXNRD1Q16881 649 aa15.69■□□□□ 0.1
SCARB2-208ENST00000638372 DENND2CQ68D51 928 aa15.69■□□□□ 0.1
SCARB2-208ENST00000638372 SEPT14Q6ZU15 432 aa15.69■□□□□ 0.1
SCARB2-208ENST00000638372 ZNF34Q8IZ26 560 aa15.69■□□□□ 0.1
SCARB2-208ENST00000638372 ZNF579Q8NAF0 562 aaKnown RBP15.69■□□□□ 0.1
SCARB2-208ENST00000638372 SLC7A3Q8WY07 619 aa15.69■□□□□ 0.1
SCARB2-208ENST00000638372 NSUN4Q96CB9 384 aaKnown RBP15.69■□□□□ 0.1
SCARB2-208ENST00000638372 CABS1Q96KC9 395 aa15.69■□□□□ 0.1
SCARB2-208ENST00000638372 KRT12Q99456 494 aa15.69■□□□□ 0.1
SCARB2-208ENST00000638372 PDE11AQ9HCR9 933 aa15.69■□□□□ 0.1
SCARB2-208ENST00000638372 FAM184BQ9ULE4 1060 aa15.69■□□□□ 0.1
SCARB2-208ENST00000638372 IQSEC2Q5JU85 1478 aa15.69■□□□□ 0.1
SCARB2-208ENST00000638372 FAM205CA6NFA0 338 aa15.69■□□□□ 0.1
SCARB2-208ENST00000638372 ZBTB5O15062 677 aa15.69■□□□□ 0.1
SCARB2-208ENST00000638372 GFPT2O94808 682 aa15.69■□□□□ 0.1
SCARB2-208ENST00000638372 GPATCH11Q8N954 259 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms