RNA–Protein interactions for RNA: ENST00000638346.1

PAX6-234, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-234ENST00000638346 POLR2MP0CAP2 368 aa12.88□□□□□ -0.35
PAX6-234ENST00000638346 TPD52L1Q16890 204 aaPredicted RBP12.88□□□□□ -0.35
PAX6-234ENST00000638346 CCDC144BQ3MJ40 725 aa12.88□□□□□ -0.35
PAX6-234ENST00000638346 GIMAP8Q8ND71 665 aaPredicted RBP12.88□□□□□ -0.35
PAX6-234ENST00000638346 ANKRD20A12PQ8NF67 263 aa12.88□□□□□ -0.35
PAX6-234ENST00000638346 AS3MTQ9HBK9 375 aa12.88□□□□□ -0.35
PAX6-234ENST00000638346 POTEMA6NI47 508 aa12.87□□□□□ -0.35
PAX6-234ENST00000638346 KLRC4O43908 158 aa12.87□□□□□ -0.35
PAX6-234ENST00000638346 ICAM1P05362 532 aa12.87□□□□□ -0.35
PAX6-234ENST00000638346 CD44P16070 742 aaKnown RBP12.87□□□□□ -0.35
PAX6-234ENST00000638346 SFPQP23246 707 aaKnown RBP eCLIP12.87□□□□□ -0.35
PAX6-234ENST00000638346 GRB10Q13322 594 aa12.87□□□□□ -0.35
PAX6-234ENST00000638346 KMT5BQ4FZB7 885 aa12.87□□□□□ -0.35
PAX6-234ENST00000638346 FILIP1LQ4L180 1135 aa12.87□□□□□ -0.35
PAX6-234ENST00000638346 TMEM119Q4V9L6 283 aa12.87□□□□□ -0.35
PAX6-234ENST00000638346 NBPF12Q5TAG4 269 aaPredicted RBP12.87□□□□□ -0.35
PAX6-234ENST00000638346 CDKAL1Q5VV42 579 aa12.87□□□□□ -0.35
PAX6-234ENST00000638346 KLHL10Q6JEL2 608 aa12.87□□□□□ -0.35
PAX6-234ENST00000638346 VSTM4Q8IW00 320 aa12.87□□□□□ -0.35
PAX6-234ENST00000638346 TRMT44Q8IYL2 757 aaKnown RBP12.87□□□□□ -0.35
PAX6-234ENST00000638346 ADSSL1Q8N142 457 aa12.87□□□□□ -0.35
PAX6-234ENST00000638346 ERMNQ8TAM6 284 aa12.87□□□□□ -0.35
PAX6-234ENST00000638346 CACTINQ8WUQ7 758 aaKnown RBP12.87□□□□□ -0.35
PAX6-234ENST00000638346 EXOC1Q9NV70 894 aa12.87□□□□□ -0.35
PAX6-234ENST00000638346 MAP3K20Q9NYL2 800 aaKnown RBP12.87□□□□□ -0.35
PAX6-234ENST00000638346 ZNF112Q9UJU3 913 aa12.87□□□□□ -0.35
PAX6-234ENST00000638346 FZD1Q9UP38 647 aa12.87□□□□□ -0.35
PAX6-234ENST00000638346 ZYXQ15942 572 aaKnown RBP12.87□□□□□ -0.35
PAX6-234ENST00000638346 TMC6Q7Z403 805 aa12.87□□□□□ -0.35
PAX6-234ENST00000638346 SCYL3Q8IZE3 742 aa12.87□□□□□ -0.35
PAX6-234ENST00000638346 ETNPPLQ8TBG4 499 aa12.87□□□□□ -0.35
PAX6-234ENST00000638346 RAD54LQ92698 747 aa12.87□□□□□ -0.35
PAX6-234ENST00000638346 DHTKD1Q96HY7 919 aaPredicted RBP12.87□□□□□ -0.35
PAX6-234ENST00000638346 MED15Q96RN5 788 aa12.87□□□□□ -0.35
PAX6-234ENST00000638346 SLF1Q9BQI6 1058 aa12.87□□□□□ -0.35
PAX6-234ENST00000638346 WDR18Q9BV38 432 aa12.87□□□□□ -0.35
PAX6-234ENST00000638346 CTNND2Q9UQB3 1225 aa12.87□□□□□ -0.35
PAX6-234ENST00000638346 A0A1B0GTH6 734 aa12.86□□□□□ -0.35
PAX6-234ENST00000638346 BICDL2A1A5D9 508 aa12.86□□□□□ -0.35
PAX6-234ENST00000638346 KCNJ6P48051 423 aa12.86□□□□□ -0.35
PAX6-234ENST00000638346 SNAP25P60880 206 aa12.86□□□□□ -0.35
PAX6-234ENST00000638346 ASIC1P78348 528 aa12.86□□□□□ -0.35
PAX6-234ENST00000638346 MCF2L2Q86YR7 1114 aa12.86□□□□□ -0.35
PAX6-234ENST00000638346 CCDC112Q8NEF3 446 aa12.86□□□□□ -0.35
PAX6-234ENST00000638346 NOC3LQ8WTT2 800 aaKnown RBP12.86□□□□□ -0.35
PAX6-234ENST00000638346 CDCA5Q96FF9 252 aa12.86□□□□□ -0.35
PAX6-234ENST00000638346 PNMA5Q96PV4 448 aa12.86□□□□□ -0.35
PAX6-234ENST00000638346 PLIN2Q99541 437 aa12.86□□□□□ -0.35
PAX6-234ENST00000638346 BLOC1S4Q9NUP1 217 aa12.86□□□□□ -0.35
PAX6-234ENST00000638346 DOCK1Q14185 1865 aa12.85□□□□□ -0.35
PAX6-234ENST00000638346 LRRC10BA6NIK2 292 aa12.85□□□□□ -0.35
PAX6-234ENST00000638346 CFBP00751 764 aa12.85□□□□□ -0.35
PAX6-234ENST00000638346 ZNF76P36508 570 aa12.85□□□□□ -0.35
PAX6-234ENST00000638346 PRCPP42785 496 aa12.85□□□□□ -0.35
PAX6-234ENST00000638346 GHRHRQ02643 423 aa12.85□□□□□ -0.35
PAX6-234ENST00000638346 PSMD2Q13200 908 aa12.85□□□□□ -0.35
PAX6-234ENST00000638346 PRR16Q569H4 304 aa12.85□□□□□ -0.35
PAX6-234ENST00000638346 SPECC1LQ69YQ0 1117 aa12.85□□□□□ -0.35
PAX6-234ENST00000638346 CHADLQ6NUI6 762 aa12.85□□□□□ -0.35
PAX6-234ENST00000638346 CCDC174Q6PII3 467 aa12.85□□□□□ -0.35
PAX6-234ENST00000638346 UNC13DQ70J99 1090 aa12.85□□□□□ -0.35
PAX6-234ENST00000638346 SMYD4Q8IYR2 804 aaPredicted RBP12.85□□□□□ -0.35
PAX6-234ENST00000638346 NELFBQ8WX92 580 aa12.85□□□□□ -0.35
PAX6-234ENST00000638346 PICK1Q9NRD5 415 aa12.85□□□□□ -0.35
PAX6-234ENST00000638346 SAMSN1Q9NSI8 373 aaKnown RBP12.85□□□□□ -0.35
PAX6-234ENST00000638346 BMP2KQ9NSY1 1161 aaPredicted RBP12.85□□□□□ -0.35
PAX6-234ENST00000638346 SKILP12757 684 aa12.85□□□□□ -0.35
PAX6-234ENST00000638346 SETQ01105 290 aaPredicted RBP12.85□□□□□ -0.35
PAX6-234ENST00000638346 PDE4DQ08499 809 aa12.85□□□□□ -0.35
PAX6-234ENST00000638346 LRMPQ12912 555 aa12.85□□□□□ -0.35
PAX6-234ENST00000638346 PRKG1Q13976 671 aa12.85□□□□□ -0.35
PAX6-234ENST00000638346 SUPT20HL1Q3ZLR7 823 aa12.85□□□□□ -0.35
PAX6-234ENST00000638346 LENG9Q96B70 501 aa12.85□□□□□ -0.35
PAX6-234ENST00000638346 PYCARDQ9ULZ3 195 aa12.85□□□□□ -0.35
PAX6-234ENST00000638346 FAM86B1E9PN63 330 aa12.84□□□□□ -0.35
PAX6-234ENST00000638346 FAM86B2P0C5J1 330 aa12.84□□□□□ -0.35
PAX6-234ENST00000638346 RPA1P27694 616 aa12.84□□□□□ -0.35
PAX6-234ENST00000638346 HOXA13P31271 388 aaPredicted RBP12.84□□□□□ -0.35
PAX6-234ENST00000638346 CCT6AP40227 531 aaKnown RBP12.84□□□□□ -0.35
PAX6-234ENST00000638346 HSD17B4P51659 736 aa12.84□□□□□ -0.35
PAX6-234ENST00000638346 TERF1P54274 439 aa12.84□□□□□ -0.35
PAX6-234ENST00000638346 STX17P56962 302 aa12.84□□□□□ -0.35
PAX6-234ENST00000638346 NR1I3Q14994 352 aa12.84□□□□□ -0.35
PAX6-234ENST00000638346 FOXR2Q6PJQ5 311 aa12.84□□□□□ -0.35
PAX6-234ENST00000638346 LRRC15Q8TF66 581 aa12.84□□□□□ -0.35
PAX6-234ENST00000638346 NAP1L5Q96NT1 182 aaPredicted RBP12.84□□□□□ -0.35
PAX6-234ENST00000638346 P2RX7Q99572 595 aaKnown RBP12.84□□□□□ -0.35
PAX6-234ENST00000638346 THAP9Q9H5L6 903 aa12.84□□□□□ -0.35
PAX6-234ENST00000638346 ZNF408Q9H9D4 720 aa12.84□□□□□ -0.35
PAX6-234ENST00000638346 SLC38A10Q9HBR0 1119 aa12.84□□□□□ -0.35
PAX6-234ENST00000638346 KCND1Q9NSA2 647 aa12.84□□□□□ -0.35
PAX6-234ENST00000638346 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.84□□□□□ -0.35
PAX6-234ENST00000638346 LIMA1Q9UHB6 759 aaKnown RBP12.84□□□□□ -0.35
PAX6-234ENST00000638346 CCPG1Q9ULG6 757 aa12.84□□□□□ -0.35
PAX6-234ENST00000638346 GDAQ9Y2T3 454 aa12.84□□□□□ -0.35
PAX6-234ENST00000638346 C19orf81C9J6K1 198 aa12.83□□□□□ -0.36
PAX6-234ENST00000638346 EEF1GP26641 437 aaKnown RBP12.83□□□□□ -0.36
PAX6-234ENST00000638346 BACE1P56817 501 aa12.83□□□□□ -0.36
PAX6-234ENST00000638346 SPIRE1Q08AE8 756 aa12.83□□□□□ -0.36
PAX6-234ENST00000638346 FCHSD1Q86WN1 690 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms