RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 ADCY7P51828 1080 aa14.39□□□□□ -0.11
CLN6-225ENST00000638144 NEK4P51957 841 aa14.39□□□□□ -0.11
CLN6-225ENST00000638144 TTLL4Q14679 1199 aa14.39□□□□□ -0.11
CLN6-225ENST00000638144 PFKFB3Q16875 520 aaPredicted RBP14.39□□□□□ -0.11
CLN6-225ENST00000638144 CXCL17Q6UXB2 119 aa14.39□□□□□ -0.11
CLN6-225ENST00000638144 SLC39A5Q6ZMH5 540 aa14.39□□□□□ -0.11
CLN6-225ENST00000638144 VTI1AQ96AJ9 217 aa14.39□□□□□ -0.11
CLN6-225ENST00000638144 MAF1Q9H063 256 aa14.39□□□□□ -0.11
CLN6-225ENST00000638144 TMEM260Q9NX78 707 aa14.39□□□□□ -0.11
CLN6-225ENST00000638144 BARHL2Q9NY43 387 aa14.39□□□□□ -0.11
CLN6-225ENST00000638144 MAP3K20Q9NYL2 800 aaKnown RBP14.39□□□□□ -0.11
CLN6-225ENST00000638144 RTEL1Q9NZ71 1219 aa14.39□□□□□ -0.11
CLN6-225ENST00000638144 FRMPD4Q14CM0 1322 aa14.39□□□□□ -0.11
CLN6-225ENST00000638144 SMCO2A6NFE2 343 aa14.38□□□□□ -0.11
CLN6-225ENST00000638144 PIK3CDO00329 1044 aa14.38□□□□□ -0.11
CLN6-225ENST00000638144 CPLX1O14810 134 aa14.38□□□□□ -0.11
CLN6-225ENST00000638144 PRPF3O43395 683 aaKnown RBP14.38□□□□□ -0.11
CLN6-225ENST00000638144 EIF3JO75822 258 aaKnown RBP14.38□□□□□ -0.11
CLN6-225ENST00000638144 MYL3P08590 195 aa14.38□□□□□ -0.11
CLN6-225ENST00000638144 IFNAR1P17181 557 aa14.38□□□□□ -0.11
CLN6-225ENST00000638144 PSMC6P62333 389 aa14.38□□□□□ -0.11
CLN6-225ENST00000638144 MRPS9P82933 396 aaKnown RBP14.38□□□□□ -0.11
CLN6-225ENST00000638144 SCRN1Q12765 414 aa14.38□□□□□ -0.11
CLN6-225ENST00000638144 CCDC62Q6P9F0 684 aa14.38□□□□□ -0.11
CLN6-225ENST00000638144 VSIG10LQ86VR7 867 aa14.38□□□□□ -0.11
CLN6-225ENST00000638144 SAMD3Q8N6K7 520 aa14.38□□□□□ -0.11
CLN6-225ENST00000638144 NECAB1Q8N987 351 aa14.38□□□□□ -0.11
CLN6-225ENST00000638144 IL17RAQ96F46 866 aa14.38□□□□□ -0.11
CLN6-225ENST00000638144 ZNF274Q96GC6 653 aaPredicted RBP14.38□□□□□ -0.11
CLN6-225ENST00000638144 AIFM3Q96NN9 605 aa14.38□□□□□ -0.11
CLN6-225ENST00000638144 TSEN34Q9BSV6 310 aaKnown RBP14.38□□□□□ -0.11
CLN6-225ENST00000638144 STARD7Q9NQZ5 370 aa14.38□□□□□ -0.11
CLN6-225ENST00000638144 VPS54Q9P1Q0 977 aa14.38□□□□□ -0.11
CLN6-225ENST00000638144 NR2E3Q9Y5X4 410 aa14.38□□□□□ -0.11
CLN6-225ENST00000638144 MRVI1Q9Y6F6 885 aa14.38□□□□□ -0.11
CLN6-225ENST00000638144 PQBP1O60828 265 aaKnown RBP14.37□□□□□ -0.11
CLN6-225ENST00000638144 EIF5BO60841 1220 aaKnown RBP14.37□□□□□ -0.11
CLN6-225ENST00000638144 AKAP17AQ02040 695 aaKnown RBP14.37□□□□□ -0.11
CLN6-225ENST00000638144 ARHGAP1Q07960 439 aa14.37□□□□□ -0.11
CLN6-225ENST00000638144 PPP1R18Q6NYC8 613 aa14.37□□□□□ -0.11
CLN6-225ENST00000638144 PCSK9Q8NBP7 692 aaKnown RBP14.37□□□□□ -0.11
CLN6-225ENST00000638144 RASGRP4Q8TDF6 673 aa14.37□□□□□ -0.11
CLN6-225ENST00000638144 KIF2CQ99661 725 aa14.37□□□□□ -0.11
CLN6-225ENST00000638144 C22orf23Q9BZE7 217 aa14.37□□□□□ -0.11
CLN6-225ENST00000638144 SLKQ9H2G2 1235 aaPredicted RBP14.37□□□□□ -0.11
CLN6-225ENST00000638144 BCAS3Q9H6U6 928 aa14.37□□□□□ -0.11
CLN6-225ENST00000638144 RIC8AQ9NPQ8 531 aa14.37□□□□□ -0.11
CLN6-225ENST00000638144 MOXD2PA6NHM9 499 aa14.36□□□□□ -0.11
CLN6-225ENST00000638144 SPDYE3A6NKU9 549 aa14.36□□□□□ -0.11
CLN6-225ENST00000638144 PFKFB2O60825 505 aa14.36□□□□□ -0.11
CLN6-225ENST00000638144 UBA1P22314 1058 aaKnown RBP14.36□□□□□ -0.11
CLN6-225ENST00000638144 CHMP4BP1P59074 171 aa14.36□□□□□ -0.11
CLN6-225ENST00000638144 SP2Q02086 613 aa14.36□□□□□ -0.11
CLN6-225ENST00000638144 TLE2Q04725 743 aa14.36□□□□□ -0.11
CLN6-225ENST00000638144 SSRP1Q08945 709 aaKnown RBP14.36□□□□□ -0.11
CLN6-225ENST00000638144 SEMA3FQ13275 785 aa14.36□□□□□ -0.11
CLN6-225ENST00000638144 ME3Q16798 604 aa14.36□□□□□ -0.11
CLN6-225ENST00000638144 JAKMIP3Q5VZ66 844 aa14.36□□□□□ -0.11
CLN6-225ENST00000638144 AFG1LQ8WV93 481 aa14.36□□□□□ -0.11
CLN6-225ENST00000638144 GLT1D1Q96MS3 346 aa14.36□□□□□ -0.11
CLN6-225ENST00000638144 RNF26Q9BY78 433 aaPredicted RBP14.36□□□□□ -0.11
CLN6-225ENST00000638144 ALDH8A1Q9H2A2 487 aaPredicted RBP14.36□□□□□ -0.11
CLN6-225ENST00000638144 PRDM5Q9NQX1 630 aaPredicted RBP14.36□□□□□ -0.11
CLN6-225ENST00000638144 PKD2L1Q9P0L9 805 aa14.36□□□□□ -0.11
CLN6-225ENST00000638144 DDX41Q9UJV9 622 aaKnown RBP14.36□□□□□ -0.11
CLN6-225ENST00000638144 PCDHA6Q9UN73 950 aa14.36□□□□□ -0.11
CLN6-225ENST00000638144 PCDHA8Q9Y5H6 950 aa14.36□□□□□ -0.11
CLN6-225ENST00000638144 LTBP2Q14767 1821 aa14.36□□□□□ -0.11
CLN6-225ENST00000638144 hCG_1984214I3L0E3 225 aa14.35□□□□□ -0.11
CLN6-225ENST00000638144 NKRFO15226 690 aaKnown RBP eCLIP14.35□□□□□ -0.11
CLN6-225ENST00000638144 GGPS1O95749 300 aa14.35□□□□□ -0.11
CLN6-225ENST00000638144 GH1P01241 217 aa14.35□□□□□ -0.11
CLN6-225ENST00000638144 NKX3-2P78367 333 aa14.35□□□□□ -0.11
CLN6-225ENST00000638144 SNX17Q15036 470 aa14.35□□□□□ -0.11
CLN6-225ENST00000638144 PCNX4Q63HM2 1172 aa14.35□□□□□ -0.11
CLN6-225ENST00000638144 CHRDL2Q6WN34 429 aa14.35□□□□□ -0.11
CLN6-225ENST00000638144 SH3RF1Q7Z6J0 888 aa14.35□□□□□ -0.11
CLN6-225ENST00000638144 TRIM22Q8IYM9 498 aa14.35□□□□□ -0.11
CLN6-225ENST00000638144 ZNF713Q8N859 430 aaPredicted RBP14.35□□□□□ -0.11
CLN6-225ENST00000638144 ANO3Q9BYT9 981 aa14.35□□□□□ -0.11
CLN6-225ENST00000638144 Q9Y3F1 56 aa14.35□□□□□ -0.11
CLN6-225ENST00000638144 SCN10AQ9Y5Y9 1956 aa14.34□□□□□ -0.11
CLN6-225ENST00000638144 CTDNEP1O95476 244 aa14.34□□□□□ -0.11
CLN6-225ENST00000638144 MMP3P08254 477 aa14.34□□□□□ -0.11
CLN6-225ENST00000638144 CPT1AP50416 773 aa14.34□□□□□ -0.11
CLN6-225ENST00000638144 FOSBP53539 338 aa14.34□□□□□ -0.11
CLN6-225ENST00000638144 ST3GAL1Q11201 340 aa14.34□□□□□ -0.11
CLN6-225ENST00000638144 ANKRD1Q15327 319 aa14.34□□□□□ -0.11
CLN6-225ENST00000638144 INPP4AQ96PE3 977 aaPredicted RBP14.34□□□□□ -0.11
CLN6-225ENST00000638144 PDLIM7Q9NR12 457 aa14.34□□□□□ -0.11
CLN6-225ENST00000638144 RBM27Q9P2N5 1060 aaKnown RBP14.34□□□□□ -0.11
CLN6-225ENST00000638144 TELO2Q9Y4R8 837 aa14.34□□□□□ -0.11
CLN6-225ENST00000638144 GRIN2DO15399 1336 aa14.34□□□□□ -0.11
CLN6-225ENST00000638144 A0A0U1RQG5 324 aaPredicted RBP14.33□□□□□ -0.12
CLN6-225ENST00000638144 ZEB2O60315 1214 aa14.33□□□□□ -0.12
CLN6-225ENST00000638144 ZNF286BP0CG31 522 aa14.33□□□□□ -0.12
CLN6-225ENST00000638144 ITGB5P18084 799 aa14.33□□□□□ -0.12
CLN6-225ENST00000638144 CLK2P49760 499 aaKnown RBP14.33□□□□□ -0.12
CLN6-225ENST00000638144 PURAQ00577 322 aaKnown RBP14.33□□□□□ -0.12
CLN6-225ENST00000638144 MDM2Q00987 491 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms