RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 ATRIPQ8WXE1 791 aa24.01■■□□□ 1.43
CLN6-224ENST00000638076 P2RX7Q99572 595 aaKnown RBP24.01■■□□□ 1.43
CLN6-224ENST00000638076 KCNMB3Q9NPA1 279 aa24.01■■□□□ 1.43
CLN6-224ENST00000638076 HERC5Q9UII4 1024 aaKnown RBP24.01■■□□□ 1.43
CLN6-224ENST00000638076 ARFGEF1Q9Y6D6 1849 aa24.01■■□□□ 1.43
CLN6-224ENST00000638076 CYP3A7-CYP3A51PA0A087WV96 503 aa24■■□□□ 1.43
CLN6-224ENST00000638076 CYP3A7P24462 503 aa24■■□□□ 1.43
CLN6-224ENST00000638076 SPICE1Q8N0Z3 855 aa24■■□□□ 1.43
CLN6-224ENST00000638076 PSMD14O00487 310 aa24■■□□□ 1.43
CLN6-224ENST00000638076 MTIF2P46199 727 aaKnown RBP24■■□□□ 1.43
CLN6-224ENST00000638076 KIFC2Q96AC6 838 aa24■■□□□ 1.43
CLN6-224ENST00000638076 IRX2Q9BZI1 471 aaPredicted RBP24■■□□□ 1.43
CLN6-224ENST00000638076 NT5C3AQ9H0P0 336 aa24■■□□□ 1.43
CLN6-224ENST00000638076 KDM3AQ9Y4C1 1321 aa23.99■■□□□ 1.43
CLN6-224ENST00000638076 ARHGAP4P98171 946 aa23.99■■□□□ 1.43
CLN6-224ENST00000638076 HYIQ5T013 277 aa23.99■■□□□ 1.43
CLN6-224ENST00000638076 RTKN2Q8IZC4 609 aa23.99■■□□□ 1.43
CLN6-224ENST00000638076 ACRBPQ8NEB7 543 aa23.99■■□□□ 1.43
CLN6-224ENST00000638076 MBOAT7Q96N66 472 aa23.99■■□□□ 1.43
CLN6-224ENST00000638076 LUC7L2Q9Y383 392 aaKnown RBP23.99■■□□□ 1.43
CLN6-224ENST00000638076 TAL1P17542 331 aaPredicted RBP23.99■■□□□ 1.43
CLN6-224ENST00000638076 ERCC6LQ2NKX8 1250 aa23.99■■□□□ 1.43
CLN6-224ENST00000638076 BTNL9Q6UXG8 535 aa23.99■■□□□ 1.43
CLN6-224ENST00000638076 LARGE2Q8N3Y3 721 aa23.99■■□□□ 1.43
CLN6-224ENST00000638076 CRYGNQ8WXF5 182 aa23.99■■□□□ 1.43
CLN6-224ENST00000638076 ECE1P42892 770 aa23.98■■□□□ 1.43
CLN6-224ENST00000638076 TBC1D8BQ0IIM8 1120 aa23.98■■□□□ 1.43
CLN6-224ENST00000638076 DLGAP5Q15398 846 aa23.98■■□□□ 1.43
CLN6-224ENST00000638076 GRIPAP1Q4V328 841 aa23.98■■□□□ 1.43
CLN6-224ENST00000638076 MOXD1Q6UVY6 613 aa23.98■■□□□ 1.43
CLN6-224ENST00000638076 GUF1Q8N442 669 aaKnown RBP23.98■■□□□ 1.43
CLN6-224ENST00000638076 NOC4LQ9BVI4 516 aaKnown RBP23.98■■□□□ 1.43
CLN6-224ENST00000638076 ZNF277Q9NRM2 450 aaPredicted RBP23.98■■□□□ 1.43
CLN6-224ENST00000638076 ZNF70Q9UC06 446 aaPredicted RBP23.98■■□□□ 1.43
CLN6-224ENST00000638076 CAPN11Q9UMQ6 739 aa23.98■■□□□ 1.43
CLN6-224ENST00000638076 VIL1P09327 827 aaKnown RBP23.98■■□□□ 1.43
CLN6-224ENST00000638076 EHHADHQ08426 723 aa23.98■■□□□ 1.43
CLN6-224ENST00000638076 OR8K1Q8NGG5 319 aa23.98■■□□□ 1.43
CLN6-224ENST00000638076 PSMD1Q99460 953 aa23.98■■□□□ 1.43
CLN6-224ENST00000638076 HDAC9Q9UKV0 1011 aa23.98■■□□□ 1.43
CLN6-224ENST00000638076 KIAA1024Q9UPX6 916 aa23.98■■□□□ 1.43
CLN6-224ENST00000638076 ZBTB12Q9Y330 459 aaPredicted RBP23.98■■□□□ 1.43
CLN6-224ENST00000638076 PSMD2Q13200 908 aa23.97■■□□□ 1.43
CLN6-224ENST00000638076 MIIPQ5JXC2 388 aa23.97■■□□□ 1.43
CLN6-224ENST00000638076 SLFN12Q8IYM2 578 aa23.97■■□□□ 1.43
CLN6-224ENST00000638076 DNAJC19Q96DA6 116 aa23.97■■□□□ 1.43
CLN6-224ENST00000638076 GMLQ99445 158 aa23.97■■□□□ 1.43
CLN6-224ENST00000638076 SPDYE3A6NKU9 549 aa23.96■■□□□ 1.43
CLN6-224ENST00000638076 E9PMD0 336 aa23.96■■□□□ 1.43
CLN6-224ENST00000638076 NKRFO15226 690 aaKnown RBP eCLIP23.96■■□□□ 1.439e-7■■■■□ 22.5
CLN6-224ENST00000638076 SSBP05455 408 aaKnown RBP eCLIP23.96■■□□□ 1.43
CLN6-224ENST00000638076 STAT3P40763 770 aa23.96■■□□□ 1.43
CLN6-224ENST00000638076 PRR16Q569H4 304 aa23.96■■□□□ 1.43
CLN6-224ENST00000638076 MCTP2Q6DN12 878 aa23.96■■□□□ 1.43
CLN6-224ENST00000638076 OGFOD1Q8N543 542 aa23.96■■□□□ 1.43
CLN6-224ENST00000638076 MNS1Q8NEH6 495 aa23.96■■□□□ 1.43
CLN6-224ENST00000638076 DNAJC7Q99615 494 aa23.96■■□□□ 1.43
CLN6-224ENST00000638076 CHP1Q99653 195 aa23.96■■□□□ 1.43
CLN6-224ENST00000638076 RGS17Q9UGC6 210 aaPredicted RBP23.96■■□□□ 1.43
CLN6-224ENST00000638076 POTEB3A0JP26 581 aa23.96■■□□□ 1.43
CLN6-224ENST00000638076 POTECB2RU33 542 aa23.96■■□□□ 1.43
CLN6-224ENST00000638076 MAP3K9P80192 1104 aa23.96■■□□□ 1.43
CLN6-224ENST00000638076 POTEBQ6S5H4 581 aa23.96■■□□□ 1.43
CLN6-224ENST00000638076 FAM151AQ8WW52 585 aa23.96■■□□□ 1.43
CLN6-224ENST00000638076 CARD6Q9BX69 1037 aa23.96■■□□□ 1.43
CLN6-224ENST00000638076 ARHGEF10LQ9HCE6 1279 aa23.96■■□□□ 1.43
CLN6-224ENST00000638076 PRR12Q9ULL5 1215 aa23.96■■□□□ 1.43
CLN6-224ENST00000638076 SYNPO2Q9UMS6 1093 aa23.96■■□□□ 1.43
CLN6-224ENST00000638076 PSME4Q14997 1843 aa23.96■■□□□ 1.43
CLN6-224ENST00000638076 TRIM21P19474 475 aaKnown RBP23.95■■□□□ 1.43
CLN6-224ENST00000638076 MMP14P50281 582 aa23.95■■□□□ 1.43
CLN6-224ENST00000638076 COASYQ13057 564 aa23.95■■□□□ 1.43
CLN6-224ENST00000638076 POTEAQ6S8J7 498 aa23.95■■□□□ 1.43
CLN6-224ENST00000638076 GLIS3Q8NEA6 775 aa23.95■■□□□ 1.43
CLN6-224ENST00000638076 ETNPPLQ8TBG4 499 aa23.95■■□□□ 1.43
CLN6-224ENST00000638076 KIF5CO60282 957 aa23.95■■□□□ 1.42
CLN6-224ENST00000638076 FOSP01100 380 aaPredicted RBP23.95■■□□□ 1.42
CLN6-224ENST00000638076 KLK7P49862 253 aa23.95■■□□□ 1.42
CLN6-224ENST00000638076 LRRC41Q15345 812 aa23.95■■□□□ 1.42
CLN6-224ENST00000638076 ARHGAP29Q52LW3 1261 aa23.95■■□□□ 1.42
CLN6-224ENST00000638076 ZNF397Q8NF99 534 aaPredicted RBP23.95■■□□□ 1.42
CLN6-224ENST00000638076 ACER1Q8TDN7 264 aa23.95■■□□□ 1.42
CLN6-224ENST00000638076 BMP2KQ9NSY1 1161 aaPredicted RBP23.95■■□□□ 1.42
CLN6-224ENST00000638076 OPLAHO14841 1288 aa23.94■■□□□ 1.42
CLN6-224ENST00000638076 HOXA7P31268 230 aaPredicted RBP23.94■■□□□ 1.42
CLN6-224ENST00000638076 SREBF1P36956 1147 aa23.94■■□□□ 1.42
CLN6-224ENST00000638076 STAT2P52630 851 aa23.94■■□□□ 1.42
CLN6-224ENST00000638076 LRRC63Q05C16 580 aa23.94■■□□□ 1.42
CLN6-224ENST00000638076 Q4G0T1 1027 aa23.94■■□□□ 1.42
CLN6-224ENST00000638076 KIAA1755Q5JYT7 1200 aa23.94■■□□□ 1.42
CLN6-224ENST00000638076 SLF1Q9BQI6 1058 aa23.94■■□□□ 1.42
CLN6-224ENST00000638076 NUP58Q9BVL2 599 aa23.94■■□□□ 1.42
CLN6-224ENST00000638076 TTYH3Q9C0H2 523 aa23.94■■□□□ 1.42
CLN6-224ENST00000638076 AGPAT5Q9NUQ2 364 aa23.94■■□□□ 1.42
CLN6-224ENST00000638076 PANK4Q9NVE7 773 aa23.94■■□□□ 1.42
CLN6-224ENST00000638076 MRFAP1Q9Y605 127 aa23.94■■□□□ 1.42
CLN6-224ENST00000638076 COL4A5P29400 1685 aa23.94■■□□□ 1.42
CLN6-224ENST00000638076 RASSF10A6NK89 507 aa23.94■■□□□ 1.42
CLN6-224ENST00000638076 PLA2G4BP0C869 781 aa23.94■■□□□ 1.42
CLN6-224ENST00000638076 DPEP1P16444 411 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms