RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 ZNF233A6NK53 670 aa16.29■□□□□ 0.2
UBE3A-227ENST00000638011 KRT7P08729 469 aa16.29■□□□□ 0.2
UBE3A-227ENST00000638011 HSPA13P48723 471 aa16.29■□□□□ 0.2
UBE3A-227ENST00000638011 TSHZ3Q63HK5 1081 aa16.29■□□□□ 0.2
UBE3A-227ENST00000638011 TDRD7Q8NHU6 1098 aaKnown RBP16.29■□□□□ 0.2
UBE3A-227ENST00000638011 COG4Q9H9E3 785 aa16.29■□□□□ 0.2
UBE3A-227ENST00000638011 ZFP69BQ9UJL9 534 aa16.29■□□□□ 0.2
UBE3A-227ENST00000638011 ZBTB24O43167 697 aaPredicted RBP16.29■□□□□ 0.2
UBE3A-227ENST00000638011 COPB1P53618 953 aaKnown RBP16.29■□□□□ 0.2
UBE3A-227ENST00000638011 CMA1P23946 247 aa16.29■□□□□ 0.2
UBE3A-227ENST00000638011 LAMC2Q13753 1193 aa16.29■□□□□ 0.2
UBE3A-227ENST00000638011 TTC6Q86TZ1 520 aa16.29■□□□□ 0.2
UBE3A-227ENST00000638011 EPS8L2Q9H6S3 715 aa16.29■□□□□ 0.2
UBE3A-227ENST00000638011 RGS12O14924 1447 aa16.29■□□□□ 0.2
UBE3A-227ENST00000638011 RSPH10B2B2RC85 870 aa16.29■□□□□ 0.2
UBE3A-227ENST00000638011 RSPH10BP0C881 870 aa16.29■□□□□ 0.2
UBE3A-227ENST00000638011 HNRNPH2P55795 449 aaKnown RBP16.29■□□□□ 0.2
UBE3A-227ENST00000638011 GOLGA8FQ08AF8 430 aa16.29■□□□□ 0.2
UBE3A-227ENST00000638011 GOLGA8DPQ0D2H9 430 aa16.29■□□□□ 0.2
UBE3A-227ENST00000638011 ARL2BPQ9Y2Y0 163 aa16.29■□□□□ 0.2
UBE3A-227ENST00000638011 CAB39Q9Y376 341 aaPredicted RBP16.29■□□□□ 0.2
UBE3A-227ENST00000638011 OATP04181 439 aa16.29■□□□□ 0.2
UBE3A-227ENST00000638011 HP1BP3Q5SSJ5 553 aaPredicted RBP16.29■□□□□ 0.2
UBE3A-227ENST00000638011 A0A1W2PQ27 194 aa16.28■□□□□ 0.2
UBE3A-227ENST00000638011 A0A1W2PQ64 194 aa16.28■□□□□ 0.2
UBE3A-227ENST00000638011 A0A1W2PQD8 194 aa16.28■□□□□ 0.2
UBE3A-227ENST00000638011 XPOTO43592 962 aaKnown RBP16.28■□□□□ 0.2
UBE3A-227ENST00000638011 RFWD2Q8NHY2 731 aa16.28■□□□□ 0.2
UBE3A-227ENST00000638011 UTP6Q9NYH9 597 aaKnown RBP16.28■□□□□ 0.2
UBE3A-227ENST00000638011 BRD1O95696 1058 aa16.28■□□□□ 0.2
UBE3A-227ENST00000638011 ST13P50502 369 aaKnown RBP16.28■□□□□ 0.2
UBE3A-227ENST00000638011 PLEKHM3Q6ZWE6 761 aa16.28■□□□□ 0.2
UBE3A-227ENST00000638011 AP4S1Q9Y587 144 aa16.28■□□□□ 0.2
UBE3A-227ENST00000638011 KHDRBS2Q5VWX1 349 aaKnown RBP16.28■□□□□ 0.2
UBE3A-227ENST00000638011 MAGEB6Q8N7X4 407 aa16.28■□□□□ 0.2
UBE3A-227ENST00000638011 NUDCD1Q96RS6 583 aa16.28■□□□□ 0.2
UBE3A-227ENST00000638011 CEP85Q6P2H3 762 aa16.28■□□□□ 0.2
UBE3A-227ENST00000638011 LINS1Q8NG48 757 aa16.28■□□□□ 0.2
UBE3A-227ENST00000638011 TMEM245Q9H330 911 aa16.28■□□□□ 0.2
UBE3A-227ENST00000638011 KRT38O76015 456 aa16.28■□□□□ 0.2
UBE3A-227ENST00000638011 PCP11498 1178 aaKnown RBP16.28■□□□□ 0.2
UBE3A-227ENST00000638011 STX3Q13277 289 aa16.28■□□□□ 0.2
UBE3A-227ENST00000638011 ZBTB40Q9NUA8 1239 aa16.28■□□□□ 0.2
UBE3A-227ENST00000638011 EHD2Q9NZN4 543 aa16.28■□□□□ 0.2
UBE3A-227ENST00000638011 FBXO2Q9UK22 296 aaPredicted RBP16.28■□□□□ 0.2
UBE3A-227ENST00000638011 PTCD1O75127 700 aaKnown RBP16.28■□□□□ 0.2
UBE3A-227ENST00000638011 NR1I2O75469 434 aa16.28■□□□□ 0.2
UBE3A-227ENST00000638011 DMP1Q13316 513 aaPredicted RBP16.28■□□□□ 0.2
UBE3A-227ENST00000638011 DHTKD1Q96HY7 919 aaPredicted RBP16.28■□□□□ 0.2
UBE3A-227ENST00000638011 VPS39Q96JC1 886 aa16.28■□□□□ 0.2
UBE3A-227ENST00000638011 LRWD1Q9UFC0 647 aa16.28■□□□□ 0.2
UBE3A-227ENST00000638011 LZTS3O60299 673 aaPredicted RBP16.28■□□□□ 0.2
UBE3A-227ENST00000638011 EHHADHQ08426 723 aa16.28■□□□□ 0.2
UBE3A-227ENST00000638011 AK8Q96MA6 479 aa16.28■□□□□ 0.2
UBE3A-227ENST00000638011 POLKQ9UBT6 870 aa16.28■□□□□ 0.2
UBE3A-227ENST00000638011 KDM5DQ9BY66 1539 aa16.28■□□□□ 0.2
UBE3A-227ENST00000638011 NCF2P19878 526 aaPredicted RBP16.27■□□□□ 0.2
UBE3A-227ENST00000638011 HLA-DPA1P20036 260 aa16.27■□□□□ 0.2
UBE3A-227ENST00000638011 NUGGCQ68CJ6 796 aa16.27■□□□□ 0.2
UBE3A-227ENST00000638011 TRPV6Q9H1D0 765 aa16.27■□□□□ 0.2
UBE3A-227ENST00000638011 POLR3AO14802 1390 aaPredicted RBP16.27■□□□□ 0.2
UBE3A-227ENST00000638011 PARD3Q8TEW0 1356 aa16.27■□□□□ 0.2
UBE3A-227ENST00000638011 HSPA9P38646 679 aaKnown RBP16.27■□□□□ 0.2
UBE3A-227ENST00000638011 RUNX1T1Q06455 604 aa16.27■□□□□ 0.2
UBE3A-227ENST00000638011 PDP2Q9P2J9 529 aa16.27■□□□□ 0.2
UBE3A-227ENST00000638011 POLR1AO95602 1720 aaPredicted RBP16.27■□□□□ 0.2
UBE3A-227ENST00000638011 CAPN9O14815 690 aa16.27■□□□□ 0.2
UBE3A-227ENST00000638011 TNNI1P19237 187 aa16.27■□□□□ 0.2
UBE3A-227ENST00000638011 ABCB4P21439 1286 aa16.27■□□□□ 0.2
UBE3A-227ENST00000638011 TAF1BQ53T94 588 aaPredicted RBP16.27■□□□□ 0.2
UBE3A-227ENST00000638011 PROSER2Q86WR7 435 aaPredicted RBP16.27■□□□□ 0.2
UBE3A-227ENST00000638011 TARSL2A2RTX5 802 aaKnown RBP16.27■□□□□ 0.2
UBE3A-227ENST00000638011 IL10P22301 178 aa16.27■□□□□ 0.2
UBE3A-227ENST00000638011 PPCSQ9HAB8 311 aa16.27■□□□□ 0.2
UBE3A-227ENST00000638011 SPTLC3Q9NUV7 552 aa16.27■□□□□ 0.2
UBE3A-227ENST00000638011 DESI2Q9BSY9 194 aa16.27■□□□□ 0.19
UBE3A-227ENST00000638011 GTPBP6O43824 516 aaPredicted RBP16.27■□□□□ 0.19
UBE3A-227ENST00000638011 CCND1P24385 295 aa16.27■□□□□ 0.19
UBE3A-227ENST00000638011 AARSP49588 968 aaKnown RBP eCLIP16.27■□□□□ 0.19
UBE3A-227ENST00000638011 ADCY7P51828 1080 aa16.27■□□□□ 0.19
UBE3A-227ENST00000638011 PHF21AQ96BD5 680 aa16.27■□□□□ 0.19
UBE3A-227ENST00000638011 SYNJ1O43426 1573 aa16.27■□□□□ 0.19
UBE3A-227ENST00000638011 CD19P15391 556 aa16.27■□□□□ 0.19
UBE3A-227ENST00000638011 ZC3H12BQ5HYM0 836 aaKnown RBP16.27■□□□□ 0.19
UBE3A-227ENST00000638011 MIGA1Q8NAN2 632 aa16.27■□□□□ 0.19
UBE3A-227ENST00000638011 ZNF274Q96GC6 653 aaPredicted RBP16.27■□□□□ 0.19
UBE3A-227ENST00000638011 SNRKQ9NRH2 765 aa16.27■□□□□ 0.19
UBE3A-227ENST00000638011 SLC27A2O14975 620 aa16.26■□□□□ 0.19
UBE3A-227ENST00000638011 STRNO43815 780 aa16.26■□□□□ 0.19
UBE3A-227ENST00000638011 DR1Q01658 176 aa16.26■□□□□ 0.19
UBE3A-227ENST00000638011 PTK2Q05397 1052 aa16.26■□□□□ 0.19
UBE3A-227ENST00000638011 TMED2Q15363 201 aa16.26■□□□□ 0.19
UBE3A-227ENST00000638011 ADRM1Q16186 407 aa16.26■□□□□ 0.19
UBE3A-227ENST00000638011 TCEANC2Q96MN5 208 aa16.26■□□□□ 0.19
UBE3A-227ENST00000638011 RNF103-CHMP3A0A140T963 221 aa16.26■□□□□ 0.19
UBE3A-227ENST00000638011 CA4P22748 312 aa16.26■□□□□ 0.19
UBE3A-227ENST00000638011 PSMA3P25788 255 aa16.26■□□□□ 0.19
UBE3A-227ENST00000638011 PROCA1Q8NCQ7 364 aaPredicted RBP16.26■□□□□ 0.19
UBE3A-227ENST00000638011 MEIS3Q99687 375 aa16.26■□□□□ 0.19
UBE3A-227ENST00000638011 KPNA7A9QM74 516 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms