RNA–Protein interactions for RNA: ENST00000637844.1

CACNA1D-227, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 3

Gene CACNA1D, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-227ENST00000637844 ASIC1P78348 528 aa7.06□□□□□ -1.28
CACNA1D-227ENST00000637844 PABPC4Q13310 644 aaKnown RBP eCLIP7.06□□□□□ -1.28
CACNA1D-227ENST00000637844 CUL4BQ13620 913 aa7.06□□□□□ -1.28
CACNA1D-227ENST00000637844 SH3D19Q5HYK7 790 aa7.06□□□□□ -1.28
CACNA1D-227ENST00000637844 NCAPH2Q6IBW4 605 aa7.06□□□□□ -1.28
CACNA1D-227ENST00000637844 CNNM4Q6P4Q7 775 aa7.06□□□□□ -1.28
CACNA1D-227ENST00000637844 RNF207Q6ZRF8 634 aa7.06□□□□□ -1.28
CACNA1D-227ENST00000637844 ZSCAN30Q86W11 494 aa7.06□□□□□ -1.28
CACNA1D-227ENST00000637844 ANKRD13AQ8IZ07 590 aa7.06□□□□□ -1.28
CACNA1D-227ENST00000637844 SPC24Q8NBT2 197 aa7.06□□□□□ -1.28
CACNA1D-227ENST00000637844 ENOX1Q8TC92 643 aaKnown RBP7.06□□□□□ -1.28
CACNA1D-227ENST00000637844 CRYGNQ8WXF5 182 aa7.06□□□□□ -1.28
CACNA1D-227ENST00000637844 STAMQ92783 540 aa7.06□□□□□ -1.28
CACNA1D-227ENST00000637844 AGBL1Q96MI9 1066 aa7.06□□□□□ -1.28
CACNA1D-227ENST00000637844 TRERF1Q96PN7 1200 aa7.06□□□□□ -1.28
CACNA1D-227ENST00000637844 C7orf25Q9BPX7 421 aa7.06□□□□□ -1.28
CACNA1D-227ENST00000637844 WDR11Q9BZH6 1224 aa7.06□□□□□ -1.28
CACNA1D-227ENST00000637844 BLZF1Q9H2G9 400 aa7.06□□□□□ -1.28
CACNA1D-227ENST00000637844 RAVER2Q9HCJ3 691 aaKnown RBP7.06□□□□□ -1.28
CACNA1D-227ENST00000637844 KBTBD4Q9NVX7 518 aa7.06□□□□□ -1.28
CACNA1D-227ENST00000637844 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.06□□□□□ -1.28
CACNA1D-227ENST00000637844 AFG3L2Q9Y4W6 797 aa7.06□□□□□ -1.28
CACNA1D-227ENST00000637844 LOC285556D6RIA3 1793 aa7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 PAPPA2Q9BXP8 1791 aa7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 BICDL2A1A5D9 508 aa7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 VWA5AO00534 786 aa7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 PSMA7O14818 248 aa7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 OPLAHO14841 1288 aa7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 GAS7O60861 476 aa7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 KIF20AO95235 890 aa7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 KRT18P05783 430 aaKnown RBP7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 TPM2P07951 284 aa7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 GHRHRQ02643 423 aa7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 PPATQ06203 517 aa7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 SPAG1Q07617 926 aa7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 PDE4DQ08499 809 aa7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 GRB10Q13322 594 aa7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 VGLL4Q14135 290 aa7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 FILIP1LQ4L180 1135 aa7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 TMEM119Q4V9L6 283 aa7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 CEP55Q53EZ4 464 aa7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 EAPPQ56P03 285 aaPredicted RBP7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 NAALADL2Q58DX5 795 aa7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 HYIQ5T013 277 aa7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 LRCH2Q5VUJ6 765 aa7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 SPATA1Q5VX52 437 aa7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 KLHL10Q6JEL2 608 aa7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 XRRA1Q6P2D8 792 aa7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 GADL1Q6ZQY3 521 aa7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 CATSPERGQ6ZRH7 1159 aa7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 NIPA1Q7RTP0 329 aa7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 ERO1BQ86YB8 467 aa7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 ETNPPLQ8TBG4 499 aa7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 RAD54LQ92698 747 aa7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 HAS1Q92839 578 aa7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 ATG4CQ96DT6 458 aa7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 CDCA5Q96FF9 252 aa7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 CTAGE1Q96RT6 745 aa7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 ZNF577Q9BSK1 485 aa7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 TEKT3Q9BXF9 490 aa7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 TEX13BQ9BXU2 312 aa7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 HOMER2Q9NSB8 354 aa7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 RNF146Q9NTX7 359 aa7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 IMPACTQ9P2X3 320 aa7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 RWDD2AQ9UIY3 292 aa7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 CLEC11AQ9Y240 323 aa7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 ZKSCAN5Q9Y2L8 839 aa7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 SNCAIPQ9Y6H5 919 aa7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 COL11A1P12107 1806 aaPredicted RBP7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 LOXHD1Q8IVV2 1947 aa7.05□□□□□ -1.28
CACNA1D-227ENST00000637844 ZNF536O15090 1300 aa7.04□□□□□ -1.28
CACNA1D-227ENST00000637844 PVALEFA0A1B0GWK0 134 aa7.04□□□□□ -1.28
CACNA1D-227ENST00000637844 DCAF8L1A6NGE4 600 aa7.04□□□□□ -1.28
CACNA1D-227ENST00000637844 FAM86B1E9PN63 330 aa7.04□□□□□ -1.28
CACNA1D-227ENST00000637844 CXCL11O14625 94 aa7.04□□□□□ -1.28
CACNA1D-227ENST00000637844 ATP2A1O14983 1001 aa7.04□□□□□ -1.28
CACNA1D-227ENST00000637844 MSH4O15457 936 aa7.04□□□□□ -1.28
CACNA1D-227ENST00000637844 RHOBTB3O94955 611 aa7.04□□□□□ -1.28
CACNA1D-227ENST00000637844 FGFR1OPO95684 399 aaKnown RBP7.04□□□□□ -1.28
CACNA1D-227ENST00000637844 SSBP05455 408 aaKnown RBP eCLIP7.04□□□□□ -1.28
CACNA1D-227ENST00000637844 FAM86B2P0C5J1 330 aa7.04□□□□□ -1.28
CACNA1D-227ENST00000637844 TAL1P17542 331 aaPredicted RBP7.04□□□□□ -1.28
CACNA1D-227ENST00000637844 MUTP22033 750 aa7.04□□□□□ -1.28
CACNA1D-227ENST00000637844 CASP1P29466 404 aa7.04□□□□□ -1.28
CACNA1D-227ENST00000637844 COPB2P35606 906 aa7.04□□□□□ -1.28
CACNA1D-227ENST00000637844 UBASH3AP57075 661 aa7.04□□□□□ -1.28
CACNA1D-227ENST00000637844 GSDMDP57764 484 aa7.04□□□□□ -1.28
CACNA1D-227ENST00000637844 IRX3P78415 501 aaPredicted RBP7.04□□□□□ -1.28
CACNA1D-227ENST00000637844 FANCCQ00597 558 aa7.04□□□□□ -1.28
CACNA1D-227ENST00000637844 PAK1Q13153 545 aa7.04□□□□□ -1.28
CACNA1D-227ENST00000637844 PSMD2Q13200 908 aa7.04□□□□□ -1.28
CACNA1D-227ENST00000637844 DGKZQ13574 1117 aa7.04□□□□□ -1.28
CACNA1D-227ENST00000637844 PLS1Q14651 629 aa7.04□□□□□ -1.28
CACNA1D-227ENST00000637844 NCAPHQ15003 741 aa7.04□□□□□ -1.28
CACNA1D-227ENST00000637844 KMT5BQ4FZB7 885 aa7.04□□□□□ -1.28
CACNA1D-227ENST00000637844 ARHGEF16Q5VV41 709 aa7.04□□□□□ -1.28
CACNA1D-227ENST00000637844 PCNX4Q63HM2 1172 aa7.04□□□□□ -1.28
CACNA1D-227ENST00000637844 SNRNP48Q6IEG0 339 aaKnown RBP7.04□□□□□ -1.28
CACNA1D-227ENST00000637844 NSMFQ6X4W1 530 aa7.04□□□□□ -1.28
CACNA1D-227ENST00000637844 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms