RNA–Protein interactions for RNA: ENST00000637624.1

PXN-222, Transcript of paxillin, human

TSL 2

Gene PXN, Length 4,132 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PXN-222	ENST00000637624	TFCP2L1	Q9NZI6	479 aa		13.32	□□□□□ -0.28
PXN-222	ENST00000637624	RWDD2A	Q9UIY3	292 aa		13.32	□□□□□ -0.28
PXN-222	ENST00000637624	ATRN	O75882	1429 aa		13.32	□□□□□ -0.28
PXN-222	ENST00000637624	EEF1G	P26641	437 aa	Known RBP	13.32	□□□□□ -0.28
PXN-222	ENST00000637624	CALML3	P27482	149 aa		13.32	□□□□□ -0.28
PXN-222	ENST00000637624	PUS7L	Q9H0K6	701 aa	Known RBP	13.32	□□□□□ -0.28
PXN-222	ENST00000637624	SLC39A2	Q9NP94	309 aa		13.32	□□□□□ -0.28
PXN-222	ENST00000637624	SNX12	Q9UMY4	172 aa		13.32	□□□□□ -0.28
PXN-222	ENST00000637624	PACSIN2	Q9UNF0	486 aa	Predicted RBP	13.32	□□□□□ -0.28
PXN-222	ENST00000637624	CRYBG1	Q9Y4K1	1723 aa		13.32	□□□□□ -0.28
PXN-222	ENST00000637624	SH3TC1	Q8TE82	1336 aa		13.32	□□□□□ -0.28
PXN-222	ENST00000637624	CCDC169	A6NNP5	214 aa		13.32	□□□□□ -0.28
PXN-222	ENST00000637624	SLC30A9	Q6PML9	568 aa		13.32	□□□□□ -0.28
PXN-222	ENST00000637624	SLC4A9	Q96Q91	983 aa		13.32	□□□□□ -0.28
PXN-222	ENST00000637624	PUS3	Q9BZE2	481 aa	Known RBP	13.32	□□□□□ -0.28
PXN-222	ENST00000637624	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	13.32	□□□□□ -0.28
PXN-222	ENST00000637624	PFDN1	O60925	122 aa		13.31	□□□□□ -0.28
PXN-222	ENST00000637624	PLTP	P55058	493 aa		13.31	□□□□□ -0.28
PXN-222	ENST00000637624	POLR2F	P61218	127 aa	Known RBP	13.31	□□□□□ -0.28
PXN-222	ENST00000637624	EXOSC10	Q01780	885 aa	Known RBP	13.31	□□□□□ -0.28
PXN-222	ENST00000637624	CUL4B	Q13620	913 aa		13.31	□□□□□ -0.28
PXN-222	ENST00000637624	CNNM4	Q6P4Q7	775 aa		13.31	□□□□□ -0.28
PXN-222	ENST00000637624	FOXP1	Q9H334	677 aa	Predicted RBP	13.31	□□□□□ -0.28
PXN-222	ENST00000637624	PLCB1	Q9NQ66	1216 aa		13.31	□□□□□ -0.28
PXN-222	ENST00000637624	TBC1D7	Q9P0N9	293 aa		13.31	□□□□□ -0.28
PXN-222	ENST00000637624	DUSP10	Q9Y6W6	482 aa		13.31	□□□□□ -0.28
PXN-222	ENST00000637624	PLCH1	Q4KWH8	1693 aa		13.31	□□□□□ -0.28
PXN-222	ENST00000637624	PPP2R2A	P63151	447 aa		13.31	□□□□□ -0.28
PXN-222	ENST00000637624	PDIA6	Q15084	440 aa		13.31	□□□□□ -0.28
PXN-222	ENST00000637624	VCPKMT	Q9H867	229 aa		13.31	□□□□□ -0.28
PXN-222	ENST00000637624	NOD2	Q9HC29	1040 aa		13.31	□□□□□ -0.28
PXN-222	ENST00000637624	ZNF652	Q9Y2D9	606 aa		13.31	□□□□□ -0.28
PXN-222	ENST00000637624	ADORA1	P30542	326 aa		13.31	□□□□□ -0.28
PXN-222	ENST00000637624	AKNAD1	Q5T1N1	836 aa		13.31	□□□□□ -0.28
PXN-222	ENST00000637624	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.31	□□□□□ -0.28
PXN-222	ENST00000637624	NELFCD	Q8IXH7	590 aa		13.31	□□□□□ -0.28
PXN-222	ENST00000637624	VPS52	Q8N1B4	723 aa		13.31	□□□□□ -0.28
PXN-222	ENST00000637624	SEC16B	Q96JE7	1060 aa		13.31	□□□□□ -0.28
PXN-222	ENST00000637624	MLXIPL	Q9NP71	852 aa		13.31	□□□□□ -0.28
PXN-222	ENST00000637624	KIF3C	O14782	793 aa		13.3	□□□□□ -0.28
PXN-222	ENST00000637624	ZNF658	Q5TYW1	1059 aa	Predicted RBP	13.3	□□□□□ -0.28
PXN-222	ENST00000637624	NUGGC	Q68CJ6	796 aa		13.3	□□□□□ -0.28
PXN-222	ENST00000637624	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.3	□□□□□ -0.28
PXN-222	ENST00000637624	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.3	□□□□□ -0.28
PXN-222	ENST00000637624	CCHCR1	Q8TD31	782 aa		13.3	□□□□□ -0.28
PXN-222	ENST00000637624	G3BP2	Q9UN86	482 aa	Known RBP	13.3	□□□□□ -0.28
PXN-222	ENST00000637624	ONECUT3	O60422	494 aa	Predicted RBP	13.3	□□□□□ -0.28
PXN-222	ENST00000637624	UQCRFS1P1	P0C7P4	283 aa		13.3	□□□□□ -0.28
PXN-222	ENST00000637624	ABCB4	P21439	1286 aa		13.3	□□□□□ -0.28
PXN-222	ENST00000637624	USPL1	Q5W0Q7	1092 aa		13.3	□□□□□ -0.28
PXN-222	ENST00000637624	CEP128	Q6ZU80	1094 aa		13.3	□□□□□ -0.28
PXN-222	ENST00000637624	SV2B	Q7L1I2	683 aa		13.3	□□□□□ -0.28
PXN-222	ENST00000637624	WDR66	Q8TBY9	1149 aa		13.3	□□□□□ -0.28
PXN-222	ENST00000637624	KCNB2	Q92953	911 aa		13.3	□□□□□ -0.28
PXN-222	ENST00000637624	RAB3IP	Q96QF0	476 aa	Predicted RBP	13.3	□□□□□ -0.28
PXN-222	ENST00000637624	OSBPL1A	Q9BXW6	950 aa		13.3	□□□□□ -0.28
PXN-222	ENST00000637624	RAB17	Q9H0T7	212 aa		13.3	□□□□□ -0.28
PXN-222	ENST00000637624	BATF3	Q9NR55	127 aa		13.3	□□□□□ -0.28
PXN-222	ENST00000637624	AGPAT5	Q9NUQ2	364 aa		13.3	□□□□□ -0.28
PXN-222	ENST00000637624	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	13.3	□□□□□ -0.28
PXN-222	ENST00000637624	PARP4	Q9UKK3	1724 aa	Known RBP	13.3	□□□□□ -0.28
PXN-222	ENST00000637624	SEMA3E	O15041	775 aa		13.3	□□□□□ -0.28
PXN-222	ENST00000637624	SLMAP	Q14BN4	828 aa		13.3	□□□□□ -0.28
PXN-222	ENST00000637624	DIXDC1	Q155Q3	683 aa		13.3	□□□□□ -0.28
PXN-222	ENST00000637624	OTUD6A	Q7L8S5	288 aa		13.3	□□□□□ -0.28
PXN-222	ENST00000637624	TRAPPC11	Q7Z392	1133 aa		13.3	□□□□□ -0.28
PXN-222	ENST00000637624	HDAC7	Q8WUI4	952 aa		13.3	□□□□□ -0.28
PXN-222	ENST00000637624	LBHD1	Q9BQE6	289 aa	Predicted RBP	13.3	□□□□□ -0.28
PXN-222	ENST00000637624	DDX23	Q9BUQ8	820 aa	Known RBP	13.3	□□□□□ -0.28
PXN-222	ENST00000637624	RBM12	Q9NTZ6	932 aa	Known RBP	13.3	□□□□□ -0.28
PXN-222	ENST00000637624	RTL9	Q8NET4	1388 aa		13.3	□□□□□ -0.28
PXN-222	ENST00000637624	LGALS16	A8MUM7	142 aa		13.29	□□□□□ -0.28
PXN-222	ENST00000637624	IL6ST	P40189	918 aa	Predicted RBP	13.29	□□□□□ -0.28
PXN-222	ENST00000637624	NAPA	P54920	295 aa		13.29	□□□□□ -0.28
PXN-222	ENST00000637624	LLGL1	Q15334	1064 aa		13.29	□□□□□ -0.28
PXN-222	ENST00000637624	TRAPPC3L	Q5T215	181 aa		13.29	□□□□□ -0.28
PXN-222	ENST00000637624	OXER1	Q8TDS5	423 aa		13.29	□□□□□ -0.28
PXN-222	ENST00000637624	LSM14B	Q9BX40	385 aa	Known RBP	13.29	□□□□□ -0.28
PXN-222	ENST00000637624	PSMD14	O00487	310 aa		13.29	□□□□□ -0.28
PXN-222	ENST00000637624	PRCP	P42785	496 aa		13.29	□□□□□ -0.28
PXN-222	ENST00000637624	DRP2	Q13474	957 aa		13.29	□□□□□ -0.28
PXN-222	ENST00000637624	CCDC105	Q8IYK2	499 aa		13.29	□□□□□ -0.28
PXN-222	ENST00000637624	TBC1D5	Q92609	795 aa		13.29	□□□□□ -0.28
PXN-222	ENST00000637624	UIMC1	Q96RL1	719 aa		13.29	□□□□□ -0.28
PXN-222	ENST00000637624	TXNDC9	O14530	226 aa		13.29	□□□□□ -0.28
PXN-222	ENST00000637624	ABL1	P00519	1130 aa		13.29	□□□□□ -0.28
PXN-222	ENST00000637624	TXK	P42681	527 aa		13.29	□□□□□ -0.28
PXN-222	ENST00000637624	ZNF365	Q70YC5	407 aa		13.29	□□□□□ -0.28
PXN-222	ENST00000637624	RETREG2	Q8NC44	543 aa		13.29	□□□□□ -0.28
PXN-222	ENST00000637624	SPDYE1	Q8NFV5	336 aa	Predicted RBP	13.29	□□□□□ -0.28
PXN-222	ENST00000637624	CUL5	Q93034	780 aa		13.29	□□□□□ -0.28
PXN-222	ENST00000637624	CHMP6	Q96FZ7	201 aa		13.29	□□□□□ -0.28
PXN-222	ENST00000637624	LACRT	Q9GZZ8	138 aa		13.29	□□□□□ -0.28
PXN-222	ENST00000637624	INTS13	Q9NVM9	706 aa		13.29	□□□□□ -0.28
PXN-222	ENST00000637624	ADAMTS1	Q9UHI8	967 aa		13.29	□□□□□ -0.28
PXN-222	ENST00000637624	MED23	Q9ULK4	1368 aa		13.29	□□□□□ -0.28
PXN-222	ENST00000637624	ITGA6	P23229	1130 aa		13.28	□□□□□ -0.28
PXN-222	ENST00000637624	RWDD2B	P57060	319 aa		13.28	□□□□□ -0.28
PXN-222	ENST00000637624	KIF2B	Q8N4N8	673 aa		13.28	□□□□□ -0.28
PXN-222	ENST00000637624	ASIC3	Q9UHC3	531 aa		13.28	□□□□□ -0.28

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