RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 CYP3A7P24462 503 aa13.51□□□□□ -0.25
CLN8-212ENST00000637083 CHRNA5P30532 468 aa13.51□□□□□ -0.25
CLN8-212ENST00000637083 TCP10Q12799 353 aa13.51□□□□□ -0.25
CLN8-212ENST00000637083 CDC37Q16543 378 aaPredicted RBP13.51□□□□□ -0.25
CLN8-212ENST00000637083 ABCB5Q2M3G0 1257 aa13.51□□□□□ -0.25
CLN8-212ENST00000637083 KIF4BQ2VIQ3 1234 aa13.51□□□□□ -0.25
CLN8-212ENST00000637083 ZNF662Q6ZS27 426 aa13.51□□□□□ -0.25
CLN8-212ENST00000637083 CCDC84Q86UT8 332 aaPredicted RBP13.51□□□□□ -0.25
CLN8-212ENST00000637083 KRT222Q8N1A0 295 aa13.51□□□□□ -0.25
CLN8-212ENST00000637083 KIAA0895Q8NCT3 520 aa13.51□□□□□ -0.25
CLN8-212ENST00000637083 NAPGQ99747 312 aaPredicted RBP13.51□□□□□ -0.25
CLN8-212ENST00000637083 SLC39A2Q9NP94 309 aa13.51□□□□□ -0.25
CLN8-212ENST00000637083 FAM198AQ9UFP1 575 aa13.51□□□□□ -0.25
CLN8-212ENST00000637083 MYH4Q9Y623 1939 aa13.5□□□□□ -0.25
CLN8-212ENST00000637083 COL2A1P02458 1487 aaPredicted RBP13.5□□□□□ -0.25
CLN8-212ENST00000637083 DDTLA6NHG4 134 aaPredicted RBP13.5□□□□□ -0.25
CLN8-212ENST00000637083 SPDYE4A6NLX3 237 aa13.5□□□□□ -0.25
CLN8-212ENST00000637083 TBX3O15119 743 aa13.5□□□□□ -0.25
CLN8-212ENST00000637083 EDIL3O43854 480 aa13.5□□□□□ -0.25
CLN8-212ENST00000637083 RAD21O60216 631 aa13.5□□□□□ -0.25
CLN8-212ENST00000637083 IDEP14735 1019 aa13.5□□□□□ -0.25
CLN8-212ENST00000637083 CDK17Q00537 523 aa13.5□□□□□ -0.25
CLN8-212ENST00000637083 MEA1Q16626 185 aa13.5□□□□□ -0.25
CLN8-212ENST00000637083 RBM26Q5T8P6 1007 aaKnown RBP13.5□□□□□ -0.25
CLN8-212ENST00000637083 HAUS3Q68CZ6 603 aa13.5□□□□□ -0.25
CLN8-212ENST00000637083 ERMNQ8TAM6 284 aa13.5□□□□□ -0.25
CLN8-212ENST00000637083 DDX12PQ92771 950 aa13.5□□□□□ -0.25
CLN8-212ENST00000637083 ANO3Q9BYT9 981 aa13.5□□□□□ -0.25
CLN8-212ENST00000637083 DNAJC18Q9H819 358 aa13.5□□□□□ -0.25
CLN8-212ENST00000637083 CACNB3P54284 484 aa13.49□□□□□ -0.25
CLN8-212ENST00000637083 MAN2A1Q16706 1144 aa13.49□□□□□ -0.25
CLN8-212ENST00000637083 DYMQ7RTS9 669 aa13.49□□□□□ -0.25
CLN8-212ENST00000637083 SRGAP1Q7Z6B7 1085 aa13.49□□□□□ -0.25
CLN8-212ENST00000637083 CCDC65Q8IXS2 484 aa13.49□□□□□ -0.25
CLN8-212ENST00000637083 MYOCDQ8IZQ8 938 aa13.49□□□□□ -0.25
CLN8-212ENST00000637083 ACRBPQ8NEB7 543 aa13.49□□□□□ -0.25
CLN8-212ENST00000637083 C7orf43Q8WVR3 580 aa13.49□□□□□ -0.25
CLN8-212ENST00000637083 HAS1Q92839 578 aa13.49□□□□□ -0.25
CLN8-212ENST00000637083 MBOAT7Q96N66 472 aa13.49□□□□□ -0.25
CLN8-212ENST00000637083 SLF1Q9BQI6 1058 aa13.49□□□□□ -0.25
CLN8-212ENST00000637083 SEMA6BQ9H3T3 888 aa13.49□□□□□ -0.25
CLN8-212ENST00000637083 TMOD2Q9NZR1 351 aa13.49□□□□□ -0.25
CLN8-212ENST00000637083 ATRNL1Q5VV63 1379 aa13.49□□□□□ -0.25
CLN8-212ENST00000637083 F5H6K3 240 aa13.49□□□□□ -0.25
CLN8-212ENST00000637083 KLRC3Q07444 240 aa13.49□□□□□ -0.25
CLN8-212ENST00000637083 WHAMMP3Q1A5X7 153 aa13.49□□□□□ -0.25
CLN8-212ENST00000637083 VWA3BQ502W6 1294 aa13.49□□□□□ -0.25
CLN8-212ENST00000637083 ARHGAP27Q6ZUM4 889 aa13.49□□□□□ -0.25
CLN8-212ENST00000637083 RSRC2Q7L4I2 434 aaKnown RBP13.49□□□□□ -0.25
CLN8-212ENST00000637083 FBXO11Q86XK2 927 aa13.49□□□□□ -0.25
CLN8-212ENST00000637083 SPDYE3A6NKU9 549 aa13.48□□□□□ -0.25
CLN8-212ENST00000637083 RNF225M0QZC1 329 aaPredicted RBP13.48□□□□□ -0.25
CLN8-212ENST00000637083 KRT86O43790 486 aa13.48□□□□□ -0.25
CLN8-212ENST00000637083 GNA14O95837 355 aa13.48□□□□□ -0.25
CLN8-212ENST00000637083 EHHADHQ08426 723 aa13.48□□□□□ -0.25
CLN8-212ENST00000637083 SLC15A2Q16348 729 aa13.48□□□□□ -0.25
CLN8-212ENST00000637083 SLC35F6Q8N357 371 aa13.48□□□□□ -0.25
CLN8-212ENST00000637083 KCTD17Q8N5Z5 321 aa13.48□□□□□ -0.25
CLN8-212ENST00000637083 LRRN4CLQ8ND94 238 aa13.48□□□□□ -0.25
CLN8-212ENST00000637083 EDEM3Q9BZQ6 932 aa13.48□□□□□ -0.25
CLN8-212ENST00000637083 TTYH3Q9C0H2 523 aa13.48□□□□□ -0.25
CLN8-212ENST00000637083 KCNMB3Q9NPA1 279 aa13.48□□□□□ -0.25
CLN8-212ENST00000637083 HERC5Q9UII4 1024 aaKnown RBP13.48□□□□□ -0.25
CLN8-212ENST00000637083 ADAMTSL1Q8N6G6 1762 aa13.48□□□□□ -0.25
CLN8-212ENST00000637083 EIF3CLB5ME19 914 aaKnown RBP13.47□□□□□ -0.25
CLN8-212ENST00000637083 TUBBP07437 444 aa13.47□□□□□ -0.25
CLN8-212ENST00000637083 BMP3P12645 472 aa13.47□□□□□ -0.25
CLN8-212ENST00000637083 CLCN6P51797 869 aa13.47□□□□□ -0.25
CLN8-212ENST00000637083 CHMP4BP1P59074 171 aa13.47□□□□□ -0.25
CLN8-212ENST00000637083 IKQ13123 557 aaPredicted RBP13.47□□□□□ -0.25
CLN8-212ENST00000637083 MIIPQ5JXC2 388 aa13.47□□□□□ -0.25
CLN8-212ENST00000637083 TEX35Q5T0J7 233 aa13.47□□□□□ -0.25
CLN8-212ENST00000637083 SYDE2Q5VT97 1194 aa13.47□□□□□ -0.25
CLN8-212ENST00000637083 TXLNBQ8N3L3 684 aa13.47□□□□□ -0.25
CLN8-212ENST00000637083 EIF3CQ99613 913 aaKnown RBP13.47□□□□□ -0.25
CLN8-212ENST00000637083 CHP1Q99653 195 aa13.47□□□□□ -0.25
CLN8-212ENST00000637083 NDST4Q9H3R1 872 aa13.47□□□□□ -0.25
CLN8-212ENST00000637083 PANK4Q9NVE7 773 aa13.47□□□□□ -0.25
CLN8-212ENST00000637083 PITPNM2Q9BZ72 1349 aa13.47□□□□□ -0.25
CLN8-212ENST00000637083 USP17L15C9J2P7 530 aa13.47□□□□□ -0.25
CLN8-212ENST00000637083 USP17L13C9JLJ4 530 aa13.47□□□□□ -0.25
CLN8-212ENST00000637083 USP17L11C9JVI0 530 aa13.47□□□□□ -0.25
CLN8-212ENST00000637083 USP17L18D6R9N7 530 aa13.47□□□□□ -0.25
CLN8-212ENST00000637083 USP17L22D6RA61 530 aa13.47□□□□□ -0.25
CLN8-212ENST00000637083 USP17L17D6RBQ6 530 aa13.47□□□□□ -0.25
CLN8-212ENST00000637083 USP17L19D6RCP7 530 aa13.47□□□□□ -0.25
CLN8-212ENST00000637083 USP17L20D6RJB6 530 aa13.47□□□□□ -0.25
CLN8-212ENST00000637083 ARHGAP25P42331 645 aa13.47□□□□□ -0.25
CLN8-212ENST00000637083 FKBP3Q00688 224 aaKnown RBP13.47□□□□□ -0.25
CLN8-212ENST00000637083 GABPB1Q06547 395 aaPredicted RBP13.47□□□□□ -0.25
CLN8-212ENST00000637083 USP17L24Q0WX57 530 aa13.47□□□□□ -0.25
CLN8-212ENST00000637083 AOC3Q16853 763 aa13.47□□□□□ -0.25
CLN8-212ENST00000637083 Q4G0T1 1027 aa13.47□□□□□ -0.25
CLN8-212ENST00000637083 FAM26FQ5R3K3 315 aa13.47□□□□□ -0.25
CLN8-212ENST00000637083 USP17L6PQ6QN14 398 aa13.47□□□□□ -0.25
CLN8-212ENST00000637083 BTNL9Q6UXG8 535 aa13.47□□□□□ -0.25
CLN8-212ENST00000637083 SH3BP5LQ7L8J4 393 aa13.47□□□□□ -0.25
CLN8-212ENST00000637083 KIAA1328Q86T90 577 aa13.47□□□□□ -0.25
CLN8-212ENST00000637083 FAM20AQ96MK3 541 aa13.47□□□□□ -0.25
CLN8-212ENST00000637083 IRX2Q9BZI1 471 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms