RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 RASSF10A6NK89 507 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 KLF4O43474 513 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 AKAP10O43572 662 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 KIF1CO43896 1103 aaKnown RBP3.54□□□□□ -1.84
VIM-210ENST00000637053 KIF5CO60282 957 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 SNX2O60749 519 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 TPPPO94811 219 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 BAIAP3O94812 1187 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 RASGRP1O95267 797 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 ESR1P03372 595 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 SSBP05455 408 aaKnown RBP eCLIP3.54□□□□□ -1.84
VIM-210ENST00000637053 INSRRP14616 1297 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 TNFAIP3P21580 790 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 ADD2P35612 726 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 DDIT3P35638 169 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 HTR3AP46098 478 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 TRPC1P48995 793 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 RGS3P49796 1198 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 NEK3P51956 506 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 SNX16P57768 344 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 PURAQ00577 322 aaKnown RBP3.54□□□□□ -1.84
VIM-210ENST00000637053 RING1Q06587 406 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 PAK2Q13177 524 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 DDX10Q13206 875 aaKnown RBP3.54□□□□□ -1.84
VIM-210ENST00000637053 SQSTM1Q13501 440 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 RAB33AQ14088 237 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 TRIM29Q14134 588 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 DSC3Q14574 896 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 ANKRD45Q5TZF3 282 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 PRPF40BQ6NWY9 871 aaKnown RBP3.54□□□□□ -1.84
VIM-210ENST00000637053 MZT2AQ6P582 158 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 CPLX2Q6PUV4 134 aaKnown RBP3.54□□□□□ -1.84
VIM-210ENST00000637053 LVRNQ6Q4G3 990 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 C22orf34Q6ZV56 151 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 ANKS3Q6ZW76 656 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 MAATS1Q7Z4T9 603 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 ZNF605Q86T29 641 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 DAAM2Q86T65 1068 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 MORC1Q86VD1 984 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 MFSD4AQ8N468 514 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 NGEFQ8N5V2 710 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 GPBAR1Q8TDU6 330 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 UBE2FQ969M7 185 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 GPRASP2Q96D09 838 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 TBC1D31Q96DN5 1066 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 CCDC120Q96HB5 630 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 SCLT1Q96NL6 688 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 FAM167BQ9BTA0 163 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 CENPOQ9BU64 300 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 POLR3CQ9BUI4 534 aaPredicted RBP3.54□□□□□ -1.84
VIM-210ENST00000637053 C19orf44Q9H6X5 657 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 CACNA2D2Q9NY47 1150 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 SUN2Q9UH99 717 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 XPO7Q9UIA9 1087 aaKnown RBP3.54□□□□□ -1.84
VIM-210ENST00000637053 TMEM59LQ9UK28 342 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 IPPQ9Y573 584 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 IKBKGQ9Y6K9 419 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 CAPN6Q9Y6Q1 641 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 CCDC85CA6NKD9 419 aa3.53□□□□□ -1.84
VIM-210ENST00000637053 SMTNL1A8MU46 457 aa3.53□□□□□ -1.84
VIM-210ENST00000637053 WASH4PA8MWX3 477 aa3.53□□□□□ -1.84
VIM-210ENST00000637053 SUV39H1O43463 412 aa3.53□□□□□ -1.84
VIM-210ENST00000637053 HTATSF1O43719 755 aaKnown RBP3.53□□□□□ -1.84
VIM-210ENST00000637053 PEX10O60683 326 aa3.53□□□□□ -1.84
VIM-210ENST00000637053 NBNO60934 754 aa3.53□□□□□ -1.84
VIM-210ENST00000637053 SEMA7AO75326 666 aa3.53□□□□□ -1.84
VIM-210ENST00000637053 CCDC175P0C221 793 aa3.53□□□□□ -1.84
VIM-210ENST00000637053 CCDC159P0C7I6 412 aa3.53□□□□□ -1.84
VIM-210ENST00000637053 GYS1P13807 737 aa3.53□□□□□ -1.84
VIM-210ENST00000637053 SLC5A1P13866 664 aa3.53□□□□□ -1.84
VIM-210ENST00000637053 TRIM27P14373 513 aa3.53□□□□□ -1.84
VIM-210ENST00000637053 IDEP14735 1019 aa3.53□□□□□ -1.84
VIM-210ENST00000637053 GLULP15104 373 aa3.53□□□□□ -1.84
VIM-210ENST00000637053 SERPINB3P29508 390 aa3.53□□□□□ -1.84
VIM-210ENST00000637053 KIF5BP33176 963 aa3.53□□□□□ -1.84
VIM-210ENST00000637053 UBA7P41226 1012 aa3.53□□□□□ -1.84
VIM-210ENST00000637053 EFEMP1Q12805 493 aa3.53□□□□□ -1.84
VIM-210ENST00000637053 MLC1Q15049 377 aa3.53□□□□□ -1.84
VIM-210ENST00000637053 TIGD5Q53EQ6 642 aa3.53□□□□□ -1.84
VIM-210ENST00000637053 PARP10Q53GL7 1025 aa3.53□□□□□ -1.84
VIM-210ENST00000637053 ZNF385BQ569K4 471 aa3.53□□□□□ -1.84
VIM-210ENST00000637053 SLC10A5Q5PT55 438 aa3.53□□□□□ -1.84
VIM-210ENST00000637053 DACT2Q5SW24 774 aa3.53□□□□□ -1.84
VIM-210ENST00000637053 MFSD4BQ5TF39 518 aa3.53□□□□□ -1.84
VIM-210ENST00000637053 MAP1SQ66K74 1059 aaPredicted RBP3.53□□□□□ -1.84
VIM-210ENST00000637053 ZNF449Q6P9G9 518 aa3.53□□□□□ -1.84
VIM-210ENST00000637053 DGKHQ86XP1 1220 aa3.53□□□□□ -1.84
VIM-210ENST00000637053 IQCF2Q8IXL9 164 aa3.53□□□□□ -1.84
VIM-210ENST00000637053 TCEAL8Q8IYN2 117 aa3.53□□□□□ -1.84
VIM-210ENST00000637053 ZDHHC14Q8IZN3 488 aa3.53□□□□□ -1.84
VIM-210ENST00000637053 ZNF713Q8N859 430 aaPredicted RBP3.53□□□□□ -1.84
VIM-210ENST00000637053 RIN3Q8TB24 985 aa3.53□□□□□ -1.84
VIM-210ENST00000637053 CRELD1Q96HD1 420 aa3.53□□□□□ -1.84
VIM-210ENST00000637053 STRBPQ96SI9 672 aaKnown RBP3.53□□□□□ -1.84
VIM-210ENST00000637053 SETDB2Q96T68 719 aa3.53□□□□□ -1.84
VIM-210ENST00000637053 DNAJC7Q99615 494 aa3.53□□□□□ -1.84
VIM-210ENST00000637053 ABCG4Q9H172 646 aa3.53□□□□□ -1.84
VIM-210ENST00000637053 COMMD8Q9NX08 183 aa3.53□□□□□ -1.84
VIM-210ENST00000637053 ZSWIM5Q9P217 1185 aa3.53□□□□□ -1.84
VIM-210ENST00000637053 STK26Q9P289 416 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms