RNA–Protein interactions for RNA: ENST00000636540.1

SRP54-AS1-205, Transcript of SRP54 antisense RNA 1 (head to head), humanhuman

BASIC

Gene SRP54-AS1, Length 565 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-AS1-205ENST00000636540 CCDC196A0A1B0GTZ2 297 aa12.79□□□□□ -0.36
SRP54-AS1-205ENST00000636540 STXBP3O00186 592 aa12.79□□□□□ -0.36
SRP54-AS1-205ENST00000636540 DYNC1LI2O43237 492 aaPredicted RBP12.79□□□□□ -0.36
SRP54-AS1-205ENST00000636540 RGS20O76081 388 aa12.79□□□□□ -0.36
SRP54-AS1-205ENST00000636540 SYN1P17600 705 aa12.79□□□□□ -0.36
SRP54-AS1-205ENST00000636540 CCND2P30279 289 aa12.79□□□□□ -0.36
SRP54-AS1-205ENST00000636540 ADD1P35611 737 aaKnown RBP12.79□□□□□ -0.36
SRP54-AS1-205ENST00000636540 TTLL4Q14679 1199 aa12.79□□□□□ -0.36
SRP54-AS1-205ENST00000636540 C8orf34Q49A92 452 aa12.79□□□□□ -0.36
SRP54-AS1-205ENST00000636540 USP17L6PQ6QN14 398 aa12.79□□□□□ -0.36
SRP54-AS1-205ENST00000636540 CHRDL2Q6WN34 429 aa12.79□□□□□ -0.36
SRP54-AS1-205ENST00000636540 COPS5Q92905 334 aa12.79□□□□□ -0.36
SRP54-AS1-205ENST00000636540 GLT1D1Q96MS3 346 aa12.79□□□□□ -0.36
SRP54-AS1-205ENST00000636540 PDLIM7Q9NR12 457 aa12.79□□□□□ -0.36
SRP54-AS1-205ENST00000636540 ELP1O95163 1332 aa12.79□□□□□ -0.36
SRP54-AS1-205ENST00000636540 LAMA3Q16787 3333 aa12.78□□□□□ -0.36
SRP54-AS1-205ENST00000636540 A0A0U1RQG5 324 aaPredicted RBP12.78□□□□□ -0.36
SRP54-AS1-205ENST00000636540 EIF5BO60841 1220 aaKnown RBP12.78□□□□□ -0.36
SRP54-AS1-205ENST00000636540 EIF3JO75822 258 aaKnown RBP12.78□□□□□ -0.36
SRP54-AS1-205ENST00000636540 SEC24BO95487 1268 aa12.78□□□□□ -0.36
SRP54-AS1-205ENST00000636540 TXNP10599 105 aaKnown RBP12.78□□□□□ -0.36
SRP54-AS1-205ENST00000636540 PDIA3P30101 505 aaKnown RBP12.78□□□□□ -0.36
SRP54-AS1-205ENST00000636540 CPT1AP50416 773 aa12.78□□□□□ -0.36
SRP54-AS1-205ENST00000636540 NAPAP54920 295 aa12.78□□□□□ -0.36
SRP54-AS1-205ENST00000636540 ARHGAP1Q07960 439 aa12.78□□□□□ -0.36
SRP54-AS1-205ENST00000636540 NTRK3Q16288 839 aa12.78□□□□□ -0.36
SRP54-AS1-205ENST00000636540 UBE2SQ16763 222 aa12.78□□□□□ -0.36
SRP54-AS1-205ENST00000636540 CXCL17Q6UXB2 119 aa12.78□□□□□ -0.36
SRP54-AS1-205ENST00000636540 SEPT14Q6ZU15 432 aa12.78□□□□□ -0.36
SRP54-AS1-205ENST00000636540 ANKRD33Q7Z3H0 272 aa12.78□□□□□ -0.36
SRP54-AS1-205ENST00000636540 VSIG10LQ86VR7 867 aa12.78□□□□□ -0.36
SRP54-AS1-205ENST00000636540 SMARCC2Q8TAQ2 1214 aa12.78□□□□□ -0.36
SRP54-AS1-205ENST00000636540 CUL5Q93034 780 aa12.78□□□□□ -0.36
SRP54-AS1-205ENST00000636540 PSTPIP2Q9H939 334 aa12.78□□□□□ -0.36
SRP54-AS1-205ENST00000636540 BARHL2Q9NY43 387 aa12.78□□□□□ -0.36
SRP54-AS1-205ENST00000636540 ZEB2O60315 1214 aa12.77□□□□□ -0.37
SRP54-AS1-205ENST00000636540 PQBP1O60828 265 aaKnown RBP12.77□□□□□ -0.37
SRP54-AS1-205ENST00000636540 CABYRO75952 493 aa12.77□□□□□ -0.37
SRP54-AS1-205ENST00000636540 MYCLP12524 364 aaPredicted RBP12.77□□□□□ -0.37
SRP54-AS1-205ENST00000636540 MAGEA10P43363 369 aaPredicted RBP12.77□□□□□ -0.37
SRP54-AS1-205ENST00000636540 MRPS9P82933 396 aaKnown RBP12.77□□□□□ -0.37
SRP54-AS1-205ENST00000636540 PURAQ00577 322 aaKnown RBP12.77□□□□□ -0.37
SRP54-AS1-205ENST00000636540 PFKFB3Q16875 520 aaPredicted RBP12.77□□□□□ -0.37
SRP54-AS1-205ENST00000636540 LY6KQ17RY6 165 aa12.77□□□□□ -0.37
SRP54-AS1-205ENST00000636540 PCNX4Q63HM2 1172 aa12.77□□□□□ -0.37
SRP54-AS1-205ENST00000636540 EMID1Q96A84 441 aaPredicted RBP12.77□□□□□ -0.37
SRP54-AS1-205ENST00000636540 INPP4AQ96PE3 977 aaPredicted RBP12.77□□□□□ -0.37
SRP54-AS1-205ENST00000636540 GDF15Q99988 308 aa12.77□□□□□ -0.37
SRP54-AS1-205ENST00000636540 NCOA5Q9HCD5 579 aaKnown RBP12.77□□□□□ -0.37
SRP54-AS1-205ENST00000636540 PDRG1Q9NUG6 133 aa12.77□□□□□ -0.37
SRP54-AS1-205ENST00000636540 RBM27Q9P2N5 1060 aaKnown RBP12.77□□□□□ -0.37
SRP54-AS1-205ENST00000636540 COLQQ9Y215 455 aaPredicted RBP12.77□□□□□ -0.37
SRP54-AS1-205ENST00000636540 MRVI1Q9Y6F6 885 aa12.77□□□□□ -0.37
SRP54-AS1-205ENST00000636540 V9GY48 417 aaPredicted RBP12.77□□□□□ -0.37
SRP54-AS1-205ENST00000636540 MROH7Q68CQ1 1323 aa12.77□□□□□ -0.37
SRP54-AS1-205ENST00000636540 A6NJR5 290 aa12.76□□□□□ -0.37
SRP54-AS1-205ENST00000636540 STAM2O75886 525 aa12.76□□□□□ -0.37
SRP54-AS1-205ENST00000636540 GH1P01241 217 aa12.76□□□□□ -0.37
SRP54-AS1-205ENST00000636540 MMP3P08254 477 aa12.76□□□□□ -0.37
SRP54-AS1-205ENST00000636540 CLTBP09497 229 aa12.76□□□□□ -0.37
SRP54-AS1-205ENST00000636540 SCG2P13521 617 aa12.76□□□□□ -0.37
SRP54-AS1-205ENST00000636540 IFNAR1P17181 557 aa12.76□□□□□ -0.37
SRP54-AS1-205ENST00000636540 UBA1P22314 1058 aaKnown RBP12.76□□□□□ -0.37
SRP54-AS1-205ENST00000636540 CDK7P50613 346 aa12.76□□□□□ -0.37
SRP54-AS1-205ENST00000636540 TLE2Q04725 743 aa12.76□□□□□ -0.37
SRP54-AS1-205ENST00000636540 PKN1Q16512 942 aa12.76□□□□□ -0.37
SRP54-AS1-205ENST00000636540 TEX2Q8IWB9 1127 aa12.76□□□□□ -0.37
SRP54-AS1-205ENST00000636540 FAM126BQ8IXS8 530 aa12.76□□□□□ -0.37
SRP54-AS1-205ENST00000636540 SLC43A3Q8NBI5 491 aa12.76□□□□□ -0.37
SRP54-AS1-205ENST00000636540 PHKBQ93100 1093 aa12.76□□□□□ -0.37
SRP54-AS1-205ENST00000636540 ZNF274Q96GC6 653 aaPredicted RBP12.76□□□□□ -0.37
SRP54-AS1-205ENST00000636540 TOX2Q96NM4 488 aa12.76□□□□□ -0.37
SRP54-AS1-205ENST00000636540 RNF26Q9BY78 433 aaPredicted RBP12.76□□□□□ -0.37
SRP54-AS1-205ENST00000636540 RIC8AQ9NPQ8 531 aa12.76□□□□□ -0.37
SRP54-AS1-205ENST00000636540 POLR3EQ9NVU0 708 aa12.76□□□□□ -0.37
SRP54-AS1-205ENST00000636540 DDX41Q9UJV9 622 aaKnown RBP12.76□□□□□ -0.37
SRP54-AS1-205ENST00000636540 ESYT2A0FGR8 921 aa12.75□□□□□ -0.37
SRP54-AS1-205ENST00000636540 ARVCFO00192 962 aa12.75□□□□□ -0.37
SRP54-AS1-205ENST00000636540 GRIN2DO15399 1336 aa12.75□□□□□ -0.37
SRP54-AS1-205ENST00000636540 ADCY7P51828 1080 aa12.75□□□□□ -0.37
SRP54-AS1-205ENST00000636540 CCT2P78371 535 aaKnown RBP12.75□□□□□ -0.37
SRP54-AS1-205ENST00000636540 SEMA3FQ13275 785 aa12.75□□□□□ -0.37
SRP54-AS1-205ENST00000636540 HABP4Q5JVS0 413 aaKnown RBP12.75□□□□□ -0.37
SRP54-AS1-205ENST00000636540 XRRA1Q6P2D8 792 aa12.75□□□□□ -0.37
SRP54-AS1-205ENST00000636540 KCNV1Q6PIU1 500 aa12.75□□□□□ -0.37
SRP54-AS1-205ENST00000636540 SH3RF1Q7Z6J0 888 aa12.75□□□□□ -0.37
SRP54-AS1-205ENST00000636540 AFG1LQ8WV93 481 aa12.75□□□□□ -0.37
SRP54-AS1-205ENST00000636540 ZFP91Q96JP5 570 aaPredicted RBP12.75□□□□□ -0.37
SRP54-AS1-205ENST00000636540 LARP6Q9BRS8 491 aaKnown RBP12.75□□□□□ -0.37
SRP54-AS1-205ENST00000636540 PRDM5Q9NQX1 630 aaPredicted RBP12.75□□□□□ -0.37
SRP54-AS1-205ENST00000636540 TRIM43BA6NCK2 446 aa12.74□□□□□ -0.37
SRP54-AS1-205ENST00000636540 SPDYE3A6NKU9 549 aa12.74□□□□□ -0.37
SRP54-AS1-205ENST00000636540 PRPF3O43395 683 aaKnown RBP12.74□□□□□ -0.37
SRP54-AS1-205ENST00000636540 FIBPO43427 364 aa12.74□□□□□ -0.37
SRP54-AS1-205ENST00000636540 MYL3P08590 195 aa12.74□□□□□ -0.37
SRP54-AS1-205ENST00000636540 HOXD8P13378 290 aaPredicted RBP12.74□□□□□ -0.37
SRP54-AS1-205ENST00000636540 ICAM3P32942 547 aa12.74□□□□□ -0.37
SRP54-AS1-205ENST00000636540 BMP8BP34820 402 aa12.74□□□□□ -0.37
SRP54-AS1-205ENST00000636540 CLK2P49760 499 aaKnown RBP12.74□□□□□ -0.37
SRP54-AS1-205ENST00000636540 PSMC6P62333 389 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms