RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 NFRKBQ6P4R8 1299 aa21.09■□□□□ 0.97
CLN6-210ENST00000635747 FCHSD1Q86WN1 690 aa21.09■□□□□ 0.97
CLN6-210ENST00000635747 RASEFQ8IZ41 740 aa21.09■□□□□ 0.97
CLN6-210ENST00000635747 EMID1Q96A84 441 aaPredicted RBP21.09■□□□□ 0.97
CLN6-210ENST00000635747 ALDH8A1Q9H2A2 487 aaPredicted RBP21.09■□□□□ 0.97
CLN6-210ENST00000635747 RBM28Q9NW13 759 aaKnown RBP21.09■□□□□ 0.97
CLN6-210ENST00000635747 DDX41Q9UJV9 622 aaKnown RBP21.09■□□□□ 0.97
CLN6-210ENST00000635747 BAZ2BQ9UIF8 2168 aaKnown RBP21.09■□□□□ 0.97
CLN6-210ENST00000635747 PLEKHA8P1O95397 391 aa21.08■□□□□ 0.97
CLN6-210ENST00000635747 CASTP20810 708 aaKnown RBP21.08■□□□□ 0.97
CLN6-210ENST00000635747 PTPN11Q06124 597 aaPredicted RBP21.08■□□□□ 0.97
CLN6-210ENST00000635747 ARHGAP1Q07960 439 aa21.08■□□□□ 0.97
CLN6-210ENST00000635747 COL9A3Q14050 684 aaPredicted RBP21.08■□□□□ 0.97
CLN6-210ENST00000635747 C9orf50Q5SZB4 431 aa21.08■□□□□ 0.97
CLN6-210ENST00000635747 MICU3Q86XE3 530 aa21.08■□□□□ 0.97
CLN6-210ENST00000635747 AFG1LQ8WV93 481 aa21.08■□□□□ 0.97
CLN6-210ENST00000635747 HIPK3Q9H422 1215 aa21.08■□□□□ 0.97
CLN6-210ENST00000635747 PIK3CDO00329 1044 aa21.07■□□□□ 0.96
CLN6-210ENST00000635747 B4GALT4O60513 344 aa21.07■□□□□ 0.96
CLN6-210ENST00000635747 RXRAP19793 462 aa21.07■□□□□ 0.96
CLN6-210ENST00000635747 FAM109BQ6ICB4 259 aaPredicted RBP21.07■□□□□ 0.96
CLN6-210ENST00000635747 APOA5Q6Q788 366 aa21.07■□□□□ 0.96
CLN6-210ENST00000635747 TMTC3Q6ZXV5 915 aa21.07■□□□□ 0.96
CLN6-210ENST00000635747 DHX37Q8IY37 1157 aaKnown RBP21.07■□□□□ 0.96
CLN6-210ENST00000635747 SMARCC2Q8TAQ2 1214 aa21.07■□□□□ 0.96
CLN6-210ENST00000635747 KCNB2Q92953 911 aa21.07■□□□□ 0.96
CLN6-210ENST00000635747 TRPV6Q9H1D0 765 aa21.07■□□□□ 0.96
CLN6-210ENST00000635747 ZBTB43O43298 467 aa21.06■□□□□ 0.96
CLN6-210ENST00000635747 EPB41L2O43491 1005 aaKnown RBP21.06■□□□□ 0.96
CLN6-210ENST00000635747 FGD1P98174 961 aa21.06■□□□□ 0.96
CLN6-210ENST00000635747 DGKDQ16760 1214 aa21.06■□□□□ 0.96
CLN6-210ENST00000635747 NBPF20Q3BBV1 942 aa21.06■□□□□ 0.96
CLN6-210ENST00000635747 ADCK5Q3MIX3 580 aa21.06■□□□□ 0.96
CLN6-210ENST00000635747 GNPTABQ3T906 1256 aa21.06■□□□□ 0.96
CLN6-210ENST00000635747 DEFB123Q8N688 67 aa21.06■□□□□ 0.96
CLN6-210ENST00000635747 RNPC3Q96LT9 517 aaKnown RBP21.06■□□□□ 0.96
CLN6-210ENST00000635747 PPP1R12CQ9BZL4 782 aa21.06■□□□□ 0.96
CLN6-210ENST00000635747 MMP3P08254 477 aa21.05■□□□□ 0.96
CLN6-210ENST00000635747 HSPA4P34932 840 aa21.05■□□□□ 0.96
CLN6-210ENST00000635747 RCAN1P53805 252 aa21.05■□□□□ 0.96
CLN6-210ENST00000635747 EPHB4P54760 987 aa21.05■□□□□ 0.96
CLN6-210ENST00000635747 SMAD3P84022 425 aaKnown RBP21.05■□□□□ 0.96
CLN6-210ENST00000635747 FAM47CQ5HY64 1035 aa21.05■□□□□ 0.96
CLN6-210ENST00000635747 XRRA1Q6P2D8 792 aa21.05■□□□□ 0.96
CLN6-210ENST00000635747 CCDC82Q8N4S0 544 aa21.05■□□□□ 0.96
CLN6-210ENST00000635747 PPTC7Q8NI37 304 aa21.05■□□□□ 0.96
CLN6-210ENST00000635747 PSTPIP2Q9H939 334 aa21.05■□□□□ 0.96
CLN6-210ENST00000635747 PPP4R2Q9NY27 417 aa21.05■□□□□ 0.96
CLN6-210ENST00000635747 FRMPD4Q14CM0 1322 aa21.04■□□□□ 0.96
CLN6-210ENST00000635747 RGS20O76081 388 aa21.04■□□□□ 0.96
CLN6-210ENST00000635747 CYP2C18P33260 490 aa21.04■□□□□ 0.96
CLN6-210ENST00000635747 RTN1Q16799 776 aa21.04■□□□□ 0.96
CLN6-210ENST00000635747 PSRC1Q6PGN9 363 aaPredicted RBP21.04■□□□□ 0.96
CLN6-210ENST00000635747 RAB11FIP4Q86YS3 637 aa21.04■□□□□ 0.96
CLN6-210ENST00000635747 TEX2Q8IWB9 1127 aa21.04■□□□□ 0.96
CLN6-210ENST00000635747 CMTR1Q8N1G2 835 aaKnown RBP21.04■□□□□ 0.96
CLN6-210ENST00000635747 IL31RAQ8NI17 732 aa21.04■□□□□ 0.96
CLN6-210ENST00000635747 NOC4LQ9BVI4 516 aaKnown RBP21.04■□□□□ 0.96
CLN6-210ENST00000635747 KATNAL1Q9BW62 490 aa21.04■□□□□ 0.96
CLN6-210ENST00000635747 MEIS2O14770 477 aa21.03■□□□□ 0.96
CLN6-210ENST00000635747 CSF2RAP15509 400 aa21.03■□□□□ 0.96
CLN6-210ENST00000635747 PSMA5P28066 241 aa21.03■□□□□ 0.96
CLN6-210ENST00000635747 CELF3Q5SZQ8 465 aaKnown RBP21.03■□□□□ 0.96
CLN6-210ENST00000635747 MYSM1Q5VVJ2 828 aa21.03■□□□□ 0.96
CLN6-210ENST00000635747 USP17L6PQ6QN14 398 aa21.03■□□□□ 0.96
CLN6-210ENST00000635747 TCEANC2Q96MN5 208 aa21.03■□□□□ 0.96
CLN6-210ENST00000635747 IL23AQ9NPF7 189 aa21.03■□□□□ 0.96
CLN6-210ENST00000635747 KLF18A0A0U1RQI7 1052 aa21.02■□□□□ 0.96
CLN6-210ENST00000635747 CCDC196A0A1B0GTZ2 297 aa21.02■□□□□ 0.96
CLN6-210ENST00000635747 PPFIA4O75335 1185 aa21.02■□□□□ 0.96
CLN6-210ENST00000635747 PCNX4Q63HM2 1172 aa21.02■□□□□ 0.96
CLN6-210ENST00000635747 BLOC1S2Q6QNY1 142 aa21.02■□□□□ 0.96
CLN6-210ENST00000635747 SESTD1Q86VW0 696 aa21.02■□□□□ 0.96
CLN6-210ENST00000635747 RPUSD2Q8IZ73 545 aaKnown RBP21.02■□□□□ 0.96
CLN6-210ENST00000635747 JAKMIP1Q96N16 626 aaKnown RBP21.02■□□□□ 0.96
CLN6-210ENST00000635747 INPP4AQ96PE3 977 aaPredicted RBP21.02■□□□□ 0.96
CLN6-210ENST00000635747 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.02■□□□□ 0.96
CLN6-210ENST00000635747 MTIF3Q9H2K0 278 aaKnown RBP21.02■□□□□ 0.96
CLN6-210ENST00000635747 MLXIPQ9HAP2 919 aa21.02■□□□□ 0.96
CLN6-210ENST00000635747 TRMT13Q9NUP7 481 aaKnown RBP21.02■□□□□ 0.96
CLN6-210ENST00000635747 BRPF3Q9ULD4 1205 aa21.02■□□□□ 0.96
CLN6-210ENST00000635747 SNX14Q9Y5W7 946 aa21.02■□□□□ 0.96
CLN6-210ENST00000635747 KIAA1217Q5T5P2 1943 aa21.02■□□□□ 0.95
CLN6-210ENST00000635747 GOLGA8AA7E2F4 631 aa21.01■□□□□ 0.95
CLN6-210ENST00000635747 GOLGA8BA8MQT2 603 aa21.01■□□□□ 0.95
CLN6-210ENST00000635747 GGPS1O95749 300 aa21.01■□□□□ 0.95
CLN6-210ENST00000635747 ICAM3P32942 547 aa21.01■□□□□ 0.95
CLN6-210ENST00000635747 MRPS9P82933 396 aaKnown RBP21.01■□□□□ 0.95
CLN6-210ENST00000635747 NEDD9Q14511 834 aa21.01■□□□□ 0.95
CLN6-210ENST00000635747 TMEM240Q5SV17 173 aa21.01■□□□□ 0.95
CLN6-210ENST00000635747 HEATR3Q7Z4Q2 680 aa21.01■□□□□ 0.95
CLN6-210ENST00000635747 FBXL16Q8N461 479 aa21.01■□□□□ 0.95
CLN6-210ENST00000635747 SPATA33Q96N06 139 aa21.01■□□□□ 0.95
CLN6-210ENST00000635747 NOD1Q9Y239 953 aa21.01■□□□□ 0.95
CLN6-210ENST00000635747 SCN10AQ9Y5Y9 1956 aa21.01■□□□□ 0.95
CLN6-210ENST00000635747 HSFX4A0A1B0GTS1 333 aaPredicted RBP21■□□□□ 0.95
CLN6-210ENST00000635747 HSFX3A0A1B0GWH4 333 aaPredicted RBP21■□□□□ 0.95
CLN6-210ENST00000635747 hCG_1984214I3L0E3 225 aa21■□□□□ 0.95
CLN6-210ENST00000635747 FIBPO43427 364 aa21■□□□□ 0.95
CLN6-210ENST00000635747 HOXD8P13378 290 aaPredicted RBP21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms