RNA–Protein interactions for RNA: ENST00000635742.1

CACNA1A-216, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,910 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-216ENST00000635742 MCF2L2Q86YR7 1114 aa11.26□□□□□ -0.61
CACNA1A-216ENST00000635742 DHX40Q8IX18 779 aaKnown RBP11.26□□□□□ -0.61
CACNA1A-216ENST00000635742 SPATA20Q8TB22 786 aa11.26□□□□□ -0.61
CACNA1A-216ENST00000635742 ZFP91Q96JP5 570 aaPredicted RBP11.26□□□□□ -0.61
CACNA1A-216ENST00000635742 TRERF1Q96PN7 1200 aa11.26□□□□□ -0.61
CACNA1A-216ENST00000635742 PNMA5Q96PV4 448 aa11.26□□□□□ -0.61
CACNA1A-216ENST00000635742 NUDT12Q9BQG2 462 aa11.26□□□□□ -0.61
CACNA1A-216ENST00000635742 BLZF1Q9H2G9 400 aa11.26□□□□□ -0.61
CACNA1A-216ENST00000635742 ZNF408Q9H9D4 720 aa11.26□□□□□ -0.61
CACNA1A-216ENST00000635742 RRAGCQ9HB90 399 aa11.26□□□□□ -0.61
CACNA1A-216ENST00000635742 RNF146Q9NTX7 359 aa11.26□□□□□ -0.61
CACNA1A-216ENST00000635742 KCNH4Q9UQ05 1017 aa11.26□□□□□ -0.61
CACNA1A-216ENST00000635742 MYPNQ86TC9 1320 aa11.26□□□□□ -0.61
CACNA1A-216ENST00000635742 MSH4O15457 936 aa11.25□□□□□ -0.61
CACNA1A-216ENST00000635742 MARCH6O60337 910 aa11.25□□□□□ -0.61
CACNA1A-216ENST00000635742 GJA5P36382 358 aa11.25□□□□□ -0.61
CACNA1A-216ENST00000635742 ZNF76P36508 570 aa11.25□□□□□ -0.61
CACNA1A-216ENST00000635742 CCDC173Q0VFZ6 552 aa11.25□□□□□ -0.61
CACNA1A-216ENST00000635742 PPIL2Q13356 520 aa11.25□□□□□ -0.61
CACNA1A-216ENST00000635742 LDLRAD1Q5T700 205 aa11.25□□□□□ -0.61
CACNA1A-216ENST00000635742 POTEEQ6S8J3 1075 aa11.25□□□□□ -0.61
CACNA1A-216ENST00000635742 AOPEPQ8N6M6 819 aa11.25□□□□□ -0.61
CACNA1A-216ENST00000635742 IL31RAQ8NI17 732 aa11.25□□□□□ -0.61
CACNA1A-216ENST00000635742 SYTL5Q8TDW5 730 aaPredicted RBP11.25□□□□□ -0.61
CACNA1A-216ENST00000635742 SNX29Q8TEQ0 813 aa11.25□□□□□ -0.61
CACNA1A-216ENST00000635742 OPTNQ96CV9 577 aa11.25□□□□□ -0.61
CACNA1A-216ENST00000635742 CCDC34Q96HJ3 373 aa11.25□□□□□ -0.61
CACNA1A-216ENST00000635742 RAB34Q9BZG1 259 aa11.25□□□□□ -0.61
CACNA1A-216ENST00000635742 EHMT1Q9H9B1 1298 aa11.25□□□□□ -0.61
CACNA1A-216ENST00000635742 CXCL11O14625 94 aa11.25□□□□□ -0.61
CACNA1A-216ENST00000635742 GTPBP6O43824 516 aaPredicted RBP11.25□□□□□ -0.61
CACNA1A-216ENST00000635742 PEX10O60683 326 aa11.25□□□□□ -0.61
CACNA1A-216ENST00000635742 STAT3P40763 770 aa11.25□□□□□ -0.61
CACNA1A-216ENST00000635742 OAZ1P54368 228 aa11.25□□□□□ -0.61
CACNA1A-216ENST00000635742 SPIRE1Q08AE8 756 aa11.25□□□□□ -0.61
CACNA1A-216ENST00000635742 CUL4BQ13620 913 aa11.25□□□□□ -0.61
CACNA1A-216ENST00000635742 MORC3Q14149 939 aa11.25□□□□□ -0.61
CACNA1A-216ENST00000635742 PDIA5Q14554 519 aa11.25□□□□□ -0.61
CACNA1A-216ENST00000635742 NSMFQ6X4W1 530 aa11.25□□□□□ -0.61
CACNA1A-216ENST00000635742 SLFN12Q8IYM2 578 aa11.25□□□□□ -0.61
CACNA1A-216ENST00000635742 PROCA1Q8NCQ7 364 aaPredicted RBP11.25□□□□□ -0.61
CACNA1A-216ENST00000635742 ANP32BQ92688 251 aaKnown RBP11.25□□□□□ -0.61
CACNA1A-216ENST00000635742 PDLIM2Q96JY6 352 aa11.25□□□□□ -0.61
CACNA1A-216ENST00000635742 PPP1R9BQ96SB3 815 aa11.25□□□□□ -0.61
CACNA1A-216ENST00000635742 PNMA2Q9UL42 364 aa11.25□□□□□ -0.61
CACNA1A-216ENST00000635742 PCDHA12Q9UN75 941 aa11.25□□□□□ -0.61
CACNA1A-216ENST00000635742 FRMPD4Q14CM0 1322 aa11.24□□□□□ -0.61
CACNA1A-216ENST00000635742 ATP2A1O14983 1001 aa11.24□□□□□ -0.61
CACNA1A-216ENST00000635742 TBX3O15119 743 aa11.24□□□□□ -0.61
CACNA1A-216ENST00000635742 SMC2O95347 1197 aa11.24□□□□□ -0.61
CACNA1A-216ENST00000635742 RPS6P62753 249 aaKnown RBP11.24□□□□□ -0.61
CACNA1A-216ENST00000635742 MOGSQ13724 837 aa11.24□□□□□ -0.61
CACNA1A-216ENST00000635742 ECM1Q16610 540 aa11.24□□□□□ -0.61
CACNA1A-216ENST00000635742 TAAR1Q96RJ0 339 aa11.24□□□□□ -0.61
CACNA1A-216ENST00000635742 TEX13BQ9BXU2 312 aa11.24□□□□□ -0.61
CACNA1A-216ENST00000635742 KBTBD4Q9NVX7 518 aa11.24□□□□□ -0.61
CACNA1A-216ENST00000635742 TMEM119Q4V9L6 283 aa11.23□□□□□ -0.61
CACNA1A-216ENST00000635742 KRT79Q5XKE5 535 aa11.23□□□□□ -0.61
CACNA1A-216ENST00000635742 RNF207Q6ZRF8 634 aa11.23□□□□□ -0.61
CACNA1A-216ENST00000635742 PLA2G4DQ86XP0 818 aa11.23□□□□□ -0.61
CACNA1A-216ENST00000635742 TRIML1Q8N9V2 468 aa11.23□□□□□ -0.61
CACNA1A-216ENST00000635742 CALML4Q96GE6 196 aa11.23□□□□□ -0.61
CACNA1A-216ENST00000635742 PURBQ96QR8 312 aaKnown RBP11.23□□□□□ -0.61
CACNA1A-216ENST00000635742 BPIFA3Q9BQP9 254 aa11.23□□□□□ -0.61
CACNA1A-216ENST00000635742 NAT10Q9H0A0 1025 aaKnown RBP11.23□□□□□ -0.61
CACNA1A-216ENST00000635742 CUEDC2Q9H467 287 aa11.23□□□□□ -0.61
CACNA1A-216ENST00000635742 NMRK2Q9NPI5 230 aa11.23□□□□□ -0.61
CACNA1A-216ENST00000635742 BLOC1S4Q9NUP1 217 aa11.23□□□□□ -0.61
CACNA1A-216ENST00000635742 HOXC10Q9NYD6 342 aa11.23□□□□□ -0.61
CACNA1A-216ENST00000635742 VAV3Q9UKW4 847 aa11.23□□□□□ -0.61
CACNA1A-216ENST00000635742 SOCS7O14512 581 aa11.23□□□□□ -0.61
CACNA1A-216ENST00000635742 EIF2AK2P19525 551 aaKnown RBP11.23□□□□□ -0.61
CACNA1A-216ENST00000635742 HOXA7P31268 230 aaPredicted RBP11.23□□□□□ -0.61
CACNA1A-216ENST00000635742 PLS1Q14651 629 aa11.23□□□□□ -0.61
CACNA1A-216ENST00000635742 CEP55Q53EZ4 464 aa11.23□□□□□ -0.61
CACNA1A-216ENST00000635742 NCAPH2Q6IBW4 605 aa11.23□□□□□ -0.61
CACNA1A-216ENST00000635742 LBX2Q6XYB7 198 aa11.23□□□□□ -0.61
CACNA1A-216ENST00000635742 KCNK18Q7Z418 384 aa11.23□□□□□ -0.61
CACNA1A-216ENST00000635742 SAMD3Q8N6K7 520 aa11.23□□□□□ -0.61
CACNA1A-216ENST00000635742 FAM20AQ96MK3 541 aa11.23□□□□□ -0.61
CACNA1A-216ENST00000635742 MAGEF1Q9HAY2 307 aa11.23□□□□□ -0.61
CACNA1A-216ENST00000635742 BTBD7Q9P203 1132 aa11.23□□□□□ -0.61
CACNA1A-216ENST00000635742 AGTPBP1Q9UPW5 1226 aa11.23□□□□□ -0.61
CACNA1A-216ENST00000635742 BECN2A8MW95 431 aa11.22□□□□□ -0.61
CACNA1A-216ENST00000635742 ADCY5O95622 1261 aa11.22□□□□□ -0.61
CACNA1A-216ENST00000635742 RPN1P04843 607 aaKnown RBP11.22□□□□□ -0.61
CACNA1A-216ENST00000635742 ARP10275 920 aa11.22□□□□□ -0.61
CACNA1A-216ENST00000635742 BAATQ14032 418 aaPredicted RBP11.22□□□□□ -0.61
CACNA1A-216ENST00000635742 NCAPHQ15003 741 aa11.22□□□□□ -0.61
CACNA1A-216ENST00000635742 CDK5RAP3Q96JB5 506 aa11.22□□□□□ -0.61
CACNA1A-216ENST00000635742 GSDMAQ96QA5 445 aa11.22□□□□□ -0.61
CACNA1A-216ENST00000635742 ASCC2Q9H1I8 757 aaPredicted RBP11.22□□□□□ -0.61
CACNA1A-216ENST00000635742 ACAD9Q9H845 621 aa11.22□□□□□ -0.61
CACNA1A-216ENST00000635742 MAP3K20Q9NYL2 800 aaKnown RBP11.22□□□□□ -0.61
CACNA1A-216ENST00000635742 STK17AQ9UEE5 414 aa11.22□□□□□ -0.61
CACNA1A-216ENST00000635742 POTEB3A0JP26 581 aa11.21□□□□□ -0.61
CACNA1A-216ENST00000635742 GOLGA6L19H0YKK7 550 aa11.21□□□□□ -0.61
CACNA1A-216ENST00000635742 MEIS1O00470 390 aa11.21□□□□□ -0.61
CACNA1A-216ENST00000635742 KLRC4O43908 158 aa11.21□□□□□ -0.61
CACNA1A-216ENST00000635742 MED24O75448 989 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms