RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, human

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCB1-208	ENST00000634926	CCNF	P41002	786 aa		3.91	□□□□□ -1.78
SMARCB1-208	ENST00000634926	ITGA1	P56199	1179 aa		3.91	□□□□□ -1.78
SMARCB1-208	ENST00000634926	TGFB2	P61812	414 aa		3.91	□□□□□ -1.78
SMARCB1-208	ENST00000634926	TAGLN	Q01995	201 aa	Known RBP	3.91	□□□□□ -1.78
SMARCB1-208	ENST00000634926	MLEC	Q14165	292 aa		3.91	□□□□□ -1.78
SMARCB1-208	ENST00000634926	CWF19L2	Q2TBE0	894 aa	Known RBP	3.91	□□□□□ -1.78
SMARCB1-208	ENST00000634926	AXDND1	Q5T1B0	1012 aa	Predicted RBP	3.91	□□□□□ -1.78
SMARCB1-208	ENST00000634926		Q8TCH9	128 aa		3.91	□□□□□ -1.78
SMARCB1-208	ENST00000634926	CDK5RAP1	Q96SZ6	601 aa	Known RBP	3.91	□□□□□ -1.78
SMARCB1-208	ENST00000634926	DEF6	Q9H4E7	631 aa		3.91	□□□□□ -1.78
SMARCB1-208	ENST00000634926	KCNQ5	Q9NR82	932 aa		3.91	□□□□□ -1.78
SMARCB1-208	ENST00000634926	KBTBD4	Q9NVX7	518 aa		3.91	□□□□□ -1.78
SMARCB1-208	ENST00000634926	GULP1	Q9UBP9	304 aa		3.91	□□□□□ -1.78
SMARCB1-208	ENST00000634926	SUCO	Q9UBS9	1254 aa	Known RBP	3.91	□□□□□ -1.78
SMARCB1-208	ENST00000634926	ZCCHC11	Q5TAX3	1644 aa	Known RBP	3.91	□□□□□ -1.78
SMARCB1-208	ENST00000634926	CTTNBP2	Q8WZ74	1663 aa		3.9	□□□□□ -1.78
SMARCB1-208	ENST00000634926	KDM5B	Q9UGL1	1544 aa		3.9	□□□□□ -1.78
SMARCB1-208	ENST00000634926	KIF27	Q86VH2	1401 aa		3.9	□□□□□ -1.78
SMARCB1-208	ENST00000634926	PLSCR1	O15162	318 aa		3.9	□□□□□ -1.79
SMARCB1-208	ENST00000634926	IGSF3	O75054	1194 aa		3.9	□□□□□ -1.79
SMARCB1-208	ENST00000634926	CD3E	P07766	207 aa		3.9	□□□□□ -1.79
SMARCB1-208	ENST00000634926	TCF3	P15923	654 aa		3.9	□□□□□ -1.79
SMARCB1-208	ENST00000634926	SELENOP	P49908	381 aa		3.9	□□□□□ -1.79
SMARCB1-208	ENST00000634926	EPHB4	P54760	987 aa		3.9	□□□□□ -1.79
SMARCB1-208	ENST00000634926	INHBE	P58166	350 aa		3.9	□□□□□ -1.79
SMARCB1-208	ENST00000634926	SLC9A5	Q14940	896 aa		3.9	□□□□□ -1.79
SMARCB1-208	ENST00000634926	CWF19L1	Q69YN2	538 aa	Known RBP	3.9	□□□□□ -1.79
SMARCB1-208	ENST00000634926	GK5	Q6ZS86	529 aa		3.9	□□□□□ -1.79
SMARCB1-208	ENST00000634926	CIR1	Q86X95	450 aa	Predicted RBP	3.9	□□□□□ -1.79
SMARCB1-208	ENST00000634926	LZTR1	Q8N653	840 aa		3.9	□□□□□ -1.79
SMARCB1-208	ENST00000634926	PEX11G	Q96HA9	241 aa		3.9	□□□□□ -1.79
SMARCB1-208	ENST00000634926	LCOR	Q96JN0	433 aa	Predicted RBP	3.9	□□□□□ -1.79
SMARCB1-208	ENST00000634926	ZNF341	Q9BYN7	854 aa		3.9	□□□□□ -1.79
SMARCB1-208	ENST00000634926	GP6	Q9HCN6	339 aa		3.9	□□□□□ -1.79
SMARCB1-208	ENST00000634926	TSPOAP1	O95153	1857 aa		3.9	□□□□□ -1.79
SMARCB1-208	ENST00000634926	MEIS3P2	A8K0S8	358 aa		3.89	□□□□□ -1.79
SMARCB1-208	ENST00000634926	RECK	O95980	971 aa		3.89	□□□□□ -1.79
SMARCB1-208	ENST00000634926	ZNF28	P17035	718 aa		3.89	□□□□□ -1.79
SMARCB1-208	ENST00000634926	NANOS3	P60323	173 aa	Known RBP	3.89	□□□□□ -1.79
SMARCB1-208	ENST00000634926	ADAM9	Q13443	819 aa		3.89	□□□□□ -1.79
SMARCB1-208	ENST00000634926	MRPL58	Q14197	206 aa	Known RBP	3.89	□□□□□ -1.79
SMARCB1-208	ENST00000634926	KRTAP15-1	Q3LI76	137 aa		3.89	□□□□□ -1.79
SMARCB1-208	ENST00000634926	DIEXF	Q68CQ4	756 aa	Known RBP	3.89	□□□□□ -1.79
SMARCB1-208	ENST00000634926	FAM124A	Q86V42	546 aa		3.89	□□□□□ -1.79
SMARCB1-208	ENST00000634926	CPNE8	Q86YQ8	564 aa		3.89	□□□□□ -1.79
SMARCB1-208	ENST00000634926	CCDC144CP	Q8IYA2	1237 aa		3.89	□□□□□ -1.79
SMARCB1-208	ENST00000634926	FIBCD1	Q8N539	461 aa		3.89	□□□□□ -1.79
SMARCB1-208	ENST00000634926	NETO2	Q8NC67	525 aa		3.89	□□□□□ -1.79
SMARCB1-208	ENST00000634926	MEGF9	Q9H1U4	602 aa		3.89	□□□□□ -1.79
SMARCB1-208	ENST00000634926	FAM86C1	Q9NVL1	165 aa		3.89	□□□□□ -1.79
SMARCB1-208	ENST00000634926	ZNF451	Q9Y4E5	1061 aa		3.89	□□□□□ -1.79
SMARCB1-208	ENST00000634926	TESMIN	Q9Y4I5	508 aa		3.89	□□□□□ -1.79
SMARCB1-208	ENST00000634926	EPRS	P07814	1512 aa	Known RBP	3.89	□□□□□ -1.79
SMARCB1-208	ENST00000634926	ABCA8	O94911	1581 aa		3.89	□□□□□ -1.79
SMARCB1-208	ENST00000634926	PLB1	Q6P1J6	1458 aa		3.88	□□□□□ -1.79
SMARCB1-208	ENST00000634926	MUSK	O15146	869 aa		3.88	□□□□□ -1.79
SMARCB1-208	ENST00000634926	NARS	O43776	548 aa	Known RBP	3.88	□□□□□ -1.79
SMARCB1-208	ENST00000634926	ZNF623	O75123	536 aa		3.88	□□□□□ -1.79
SMARCB1-208	ENST00000634926	TBC1D8	O95759	1140 aa		3.88	□□□□□ -1.79
SMARCB1-208	ENST00000634926	NTRK1	P04629	796 aa		3.88	□□□□□ -1.79
SMARCB1-208	ENST00000634926	ITGAE	P38570	1179 aa		3.88	□□□□□ -1.79
SMARCB1-208	ENST00000634926	DGCR2	P98153	550 aa		3.88	□□□□□ -1.79
SMARCB1-208	ENST00000634926	POU4F1	Q01851	419 aa		3.88	□□□□□ -1.79
SMARCB1-208	ENST00000634926	PSMD2	Q13200	908 aa		3.88	□□□□□ -1.79
SMARCB1-208	ENST00000634926	FOXE3	Q13461	319 aa		3.88	□□□□□ -1.79
SMARCB1-208	ENST00000634926	SEZ6	Q53EL9	994 aa		3.88	□□□□□ -1.79
SMARCB1-208	ENST00000634926	WWC2	Q6AWC2	1192 aa		3.88	□□□□□ -1.79
SMARCB1-208	ENST00000634926	PKN3	Q6P5Z2	889 aa		3.88	□□□□□ -1.79
SMARCB1-208	ENST00000634926	CD300LD	Q6UXZ3	194 aa		3.88	□□□□□ -1.79
SMARCB1-208	ENST00000634926	ZNF503	Q96F45	646 aa		3.88	□□□□□ -1.79
SMARCB1-208	ENST00000634926	CEP89	Q96ST8	783 aa		3.88	□□□□□ -1.79
SMARCB1-208	ENST00000634926	DLL4	Q9NR61	685 aa		3.88	□□□□□ -1.79
SMARCB1-208	ENST00000634926	UBP1	Q9NZI7	540 aa		3.88	□□□□□ -1.79
SMARCB1-208	ENST00000634926	TNIK	Q9UKE5	1360 aa		3.88	□□□□□ -1.79
SMARCB1-208	ENST00000634926	CFAP43	Q8NDM7	1665 aa		3.87	□□□□□ -1.79
SMARCB1-208	ENST00000634926	ASXL2	Q76L83	1435 aa		3.87	□□□□□ -1.79
SMARCB1-208	ENST00000634926	SGSM2	O43147	1006 aa		3.87	□□□□□ -1.79
SMARCB1-208	ENST00000634926	STAT5A	P42229	794 aa		3.87	□□□□□ -1.79
SMARCB1-208	ENST00000634926	MLLT6	P55198	1093 aa	Predicted RBP	3.87	□□□□□ -1.79
SMARCB1-208	ENST00000634926	PPP2CB	P62714	309 aa		3.87	□□□□□ -1.79
SMARCB1-208	ENST00000634926	PPP2CA	P67775	309 aa		3.87	□□□□□ -1.79
SMARCB1-208	ENST00000634926	MIIP	Q5JXC2	388 aa		3.87	□□□□□ -1.79
SMARCB1-208	ENST00000634926	ERMP1	Q7Z2K6	904 aa		3.87	□□□□□ -1.79
SMARCB1-208	ENST00000634926	MIB1	Q86YT6	1006 aa		3.87	□□□□□ -1.79
SMARCB1-208	ENST00000634926	YTHDC1	Q96MU7	727 aa	Known RBP	3.87	□□□□□ -1.79
SMARCB1-208	ENST00000634926	ZDHHC15	Q96MV8	337 aa		3.87	□□□□□ -1.79
SMARCB1-208	ENST00000634926	BACH2	Q9BYV9	841 aa		3.87	□□□□□ -1.79
SMARCB1-208	ENST00000634926	NOL6	Q9H6R4	1146 aa	Known RBP	3.87	□□□□□ -1.79
SMARCB1-208	ENST00000634926	FHOD1	Q9Y613	1164 aa		3.87	□□□□□ -1.79
SMARCB1-208	ENST00000634926	ADGRL1	O94910	1474 aa		3.86	□□□□□ -1.79
SMARCB1-208	ENST00000634926	SAMD9	Q5K651	1589 aa		3.86	□□□□□ -1.79
SMARCB1-208	ENST00000634926	FRMPD1	Q5SYB0	1578 aa		3.86	□□□□□ -1.79
SMARCB1-208	ENST00000634926	C9orf118	A6NHY6	69 aa		3.86	□□□□□ -1.79
SMARCB1-208	ENST00000634926	ZBTB7A	O95365	584 aa		3.86	□□□□□ -1.79
SMARCB1-208	ENST00000634926	TP53	P04637	393 aa	Predicted RBP	3.86	□□□□□ -1.79
SMARCB1-208	ENST00000634926	CD247	P20963	164 aa		3.86	□□□□□ -1.79
SMARCB1-208	ENST00000634926	EIF4A3	P38919	411 aa	Known RBP	3.86	□□□□□ -1.79
SMARCB1-208	ENST00000634926	NOP2	P46087	812 aa	Known RBP	3.86	□□□□□ -1.79
SMARCB1-208	ENST00000634926	PMS1	P54277	932 aa	Known RBP	3.86	□□□□□ -1.79
SMARCB1-208	ENST00000634926	SURF1	Q15526	300 aa		3.86	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms