RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 WDR11Q9BZH6 1224 aa16.92■□□□□ 0.3
CDC42BPB-209ENST00000634889 UPF3AQ9H1J1 476 aaKnown RBP16.92■□□□□ 0.3
CDC42BPB-209ENST00000634889 EHMT1Q9H9B1 1298 aa16.92■□□□□ 0.3
CDC42BPB-209ENST00000634889 SPC25Q9HBM1 224 aa16.92■□□□□ 0.3
CDC42BPB-209ENST00000634889 SH2B1Q9NRF2 756 aaPredicted RBP16.92■□□□□ 0.3
CDC42BPB-209ENST00000634889 CTDNEP1O95476 244 aa16.91■□□□□ 0.3
CDC42BPB-209ENST00000634889 PGK1P00558 417 aa16.91■□□□□ 0.3
CDC42BPB-209ENST00000634889 COL6A1P12109 1028 aa16.91■□□□□ 0.3
CDC42BPB-209ENST00000634889 MYCLP12524 364 aaPredicted RBP16.91■□□□□ 0.3
CDC42BPB-209ENST00000634889 CLK2P49760 499 aaKnown RBP16.91■□□□□ 0.3
CDC42BPB-209ENST00000634889 TTLL4Q14679 1199 aa16.91■□□□□ 0.3
CDC42BPB-209ENST00000634889 KCNV1Q6PIU1 500 aa16.91■□□□□ 0.3
CDC42BPB-209ENST00000634889 TLK2Q86UE8 772 aa16.91■□□□□ 0.3
CDC42BPB-209ENST00000634889 NECAB1Q8N987 351 aa16.91■□□□□ 0.3
CDC42BPB-209ENST00000634889 IL31RAQ8NI17 732 aa16.91■□□□□ 0.3
CDC42BPB-209ENST00000634889 BICD2Q8TD16 824 aa16.91■□□□□ 0.3
CDC42BPB-209ENST00000634889 DIS3LQ8TF46 1054 aaKnown RBP16.91■□□□□ 0.3
CDC42BPB-209ENST00000634889 PAWRQ96IZ0 340 aaKnown RBP16.91■□□□□ 0.3
CDC42BPB-209ENST00000634889 C11orf49Q9H6J7 331 aa16.91■□□□□ 0.3
CDC42BPB-209ENST00000634889 PCDHA6Q9UN73 950 aa16.91■□□□□ 0.3
CDC42BPB-209ENST00000634889 PCDHA8Q9Y5H6 950 aa16.91■□□□□ 0.3
CDC42BPB-209ENST00000634889 TXNP10599 105 aaKnown RBP16.9■□□□□ 0.3
CDC42BPB-209ENST00000634889 GJC2Q5T442 439 aaPredicted RBP16.9■□□□□ 0.3
CDC42BPB-209ENST00000634889 KLHDC9Q8NEP7 349 aa16.9■□□□□ 0.3
CDC42BPB-209ENST00000634889 WASF1Q92558 559 aa16.9■□□□□ 0.3
CDC42BPB-209ENST00000634889 TSEN34Q9BSV6 310 aaKnown RBP16.9■□□□□ 0.3
CDC42BPB-209ENST00000634889 VPS54Q9P1Q0 977 aa16.9■□□□□ 0.3
CDC42BPB-209ENST00000634889 RGS20O76081 388 aa16.89■□□□□ 0.29
CDC42BPB-209ENST00000634889 C6orf222P0C671 652 aaPredicted RBP16.89■□□□□ 0.29
CDC42BPB-209ENST00000634889 TGFB3P10600 412 aa16.89■□□□□ 0.29
CDC42BPB-209ENST00000634889 XBP1P17861 261 aa16.89■□□□□ 0.29
CDC42BPB-209ENST00000634889 MCM2P49736 904 aa16.89■□□□□ 0.29
CDC42BPB-209ENST00000634889 MRPS9P82933 396 aaKnown RBP16.89■□□□□ 0.29
CDC42BPB-209ENST00000634889 GNPTABQ3T906 1256 aa16.89■□□□□ 0.29
CDC42BPB-209ENST00000634889 GALNT17Q6IS24 598 aa16.89■□□□□ 0.29
CDC42BPB-209ENST00000634889 CCDC62Q6P9F0 684 aa16.89■□□□□ 0.29
CDC42BPB-209ENST00000634889 SEPT14Q6ZU15 432 aa16.89■□□□□ 0.29
CDC42BPB-209ENST00000634889 REXO1Q8N1G1 1221 aaKnown RBP16.89■□□□□ 0.29
CDC42BPB-209ENST00000634889 PCSK9Q8NBP7 692 aaKnown RBP16.89■□□□□ 0.29
CDC42BPB-209ENST00000634889 NSUN7Q8NE18 718 aaKnown RBP16.89■□□□□ 0.29
CDC42BPB-209ENST00000634889 INPP4AQ96PE3 977 aaPredicted RBP16.89■□□□□ 0.29
CDC42BPB-209ENST00000634889 LLPHQ9BRT6 129 aaKnown RBP16.89■□□□□ 0.29
CDC42BPB-209ENST00000634889 HTATIP2Q9BUP3 242 aa16.89■□□□□ 0.29
CDC42BPB-209ENST00000634889 AP5M1Q9H0R1 490 aa16.89■□□□□ 0.29
CDC42BPB-209ENST00000634889 ORC3Q9UBD5 711 aaPredicted RBP16.89■□□□□ 0.29
CDC42BPB-209ENST00000634889 MOXD2PA6NHM9 499 aa16.88■□□□□ 0.29
CDC42BPB-209ENST00000634889 MYCNP04198 464 aaPredicted RBP16.88■□□□□ 0.29
CDC42BPB-209ENST00000634889 NLRP5P59047 1200 aa16.88■□□□□ 0.29
CDC42BPB-209ENST00000634889 ST3GAL1Q11201 340 aa16.88■□□□□ 0.29
CDC42BPB-209ENST00000634889 CCSAPQ6IQ19 270 aaPredicted RBP16.88■□□□□ 0.29
CDC42BPB-209ENST00000634889 ANO3Q9BYT9 981 aa16.88■□□□□ 0.29
CDC42BPB-209ENST00000634889 PHF24Q9UPV7 400 aa16.88■□□□□ 0.29
CDC42BPB-209ENST00000634889 MRVI1Q9Y6F6 885 aa16.88■□□□□ 0.29
CDC42BPB-209ENST00000634889 DNAH12Q6ZR08 3092 aa16.88■□□□□ 0.29
CDC42BPB-209ENST00000634889 CTAGE5O15320 804 aa16.87■□□□□ 0.29
CDC42BPB-209ENST00000634889 DYNC1LI2O43237 492 aaPredicted RBP16.87■□□□□ 0.29
CDC42BPB-209ENST00000634889 ARIH2O95376 493 aa16.87■□□□□ 0.29
CDC42BPB-209ENST00000634889 SREBF1P36956 1147 aa16.87■□□□□ 0.29
CDC42BPB-209ENST00000634889 FSCN1Q16658 493 aaKnown RBP16.87■□□□□ 0.29
CDC42BPB-209ENST00000634889 GNASQ5JWF2 1037 aa16.87■□□□□ 0.29
CDC42BPB-209ENST00000634889 TMEM63BQ5T3F8 832 aa16.87■□□□□ 0.29
CDC42BPB-209ENST00000634889 DAGLBQ8NCG7 672 aa16.87■□□□□ 0.29
CDC42BPB-209ENST00000634889 AIFM3Q96NN9 605 aa16.87■□□□□ 0.29
CDC42BPB-209ENST00000634889 TMEM260Q9NX78 707 aa16.87■□□□□ 0.29
CDC42BPB-209ENST00000634889 DDX41Q9UJV9 622 aaKnown RBP16.87■□□□□ 0.29
CDC42BPB-209ENST00000634889 PCDHA4Q9UN74 947 aa16.87■□□□□ 0.29
CDC42BPB-209ENST00000634889 MYADML2A6NDP7 307 aa16.86■□□□□ 0.29
CDC42BPB-209ENST00000634889 FIBPO43427 364 aa16.86■□□□□ 0.29
CDC42BPB-209ENST00000634889 ZEB2O60315 1214 aa16.86■□□□□ 0.29
CDC42BPB-209ENST00000634889 GH1P01241 217 aa16.86■□□□□ 0.29
CDC42BPB-209ENST00000634889 FDPSP14324 419 aaKnown RBP16.86■□□□□ 0.29
CDC42BPB-209ENST00000634889 ICAM3P32942 547 aa16.86■□□□□ 0.29
CDC42BPB-209ENST00000634889 CPT1AP50416 773 aa16.86■□□□□ 0.29
CDC42BPB-209ENST00000634889 ACLYP53396 1101 aa16.86■□□□□ 0.29
CDC42BPB-209ENST00000634889 KCNA10Q16322 511 aa16.86■□□□□ 0.29
CDC42BPB-209ENST00000634889 LY6KQ17RY6 165 aa16.86■□□□□ 0.29
CDC42BPB-209ENST00000634889 BRDTQ58F21 947 aaPredicted RBP16.86■□□□□ 0.29
CDC42BPB-209ENST00000634889 NLRX1Q86UT6 975 aa16.86■□□□□ 0.29
CDC42BPB-209ENST00000634889 CCDC83Q8IWF9 413 aa16.86■□□□□ 0.29
CDC42BPB-209ENST00000634889 OR6J1Q8NGC5 347 aa16.86■□□□□ 0.29
CDC42BPB-209ENST00000634889 EMID1Q96A84 441 aaPredicted RBP16.86■□□□□ 0.29
CDC42BPB-209ENST00000634889 GPRASP2Q96D09 838 aa16.86■□□□□ 0.29
CDC42BPB-209ENST00000634889 CDHR1Q96JP9 859 aa16.86■□□□□ 0.29
CDC42BPB-209ENST00000634889 PHF20Q9BVI0 1012 aa16.86■□□□□ 0.29
CDC42BPB-209ENST00000634889 SENP6Q9GZR1 1112 aaPredicted RBP16.86■□□□□ 0.29
CDC42BPB-209ENST00000634889 A0A1W2PQ45 241 aaPredicted RBP16.85■□□□□ 0.29
CDC42BPB-209ENST00000634889 A0A1W2PQY0 241 aa16.85■□□□□ 0.29
CDC42BPB-209ENST00000634889 SPATA31C2B4DYI2 1134 aa16.85■□□□□ 0.29
CDC42BPB-209ENST00000634889 ARHGAP4P98171 946 aa16.85■□□□□ 0.29
CDC42BPB-209ENST00000634889 JAKMIP3Q5VZ66 844 aa16.85■□□□□ 0.29
CDC42BPB-209ENST00000634889 ALG1Q9BT22 464 aa16.85■□□□□ 0.29
CDC42BPB-209ENST00000634889 RTEL1Q9NZ71 1219 aa16.85■□□□□ 0.29
CDC42BPB-209ENST00000634889 UBIAD1Q9Y5Z9 338 aa16.85■□□□□ 0.29
CDC42BPB-209ENST00000634889 A6NJR5 290 aa16.84■□□□□ 0.29
CDC42BPB-209ENST00000634889 M0R2N6 131 aa16.84■□□□□ 0.29
CDC42BPB-209ENST00000634889 MAFGO15525 162 aa16.84■□□□□ 0.29
CDC42BPB-209ENST00000634889 JAK2O60674 1132 aa16.84■□□□□ 0.29
CDC42BPB-209ENST00000634889 CABYRO75952 493 aa16.84■□□□□ 0.29
CDC42BPB-209ENST00000634889 CD2BP2O95400 341 aaKnown RBP16.84■□□□□ 0.29
CDC42BPB-209ENST00000634889 ASGR1P07306 291 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms