RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 MDM2Q00987 491 aaPredicted RBP18.05■□□□□ 0.48
LINC00339-207ENST00000634712 CCDC62Q6P9F0 684 aa18.05■□□□□ 0.48
LINC00339-207ENST00000634712 GPKOWQ92917 476 aaPredicted RBP eCLIP18.05■□□□□ 0.48
LINC00339-207ENST00000634712 TOX2Q96NM4 488 aa18.05■□□□□ 0.48
LINC00339-207ENST00000634712 AGXT2Q9BYV1 514 aa18.05■□□□□ 0.48
LINC00339-207ENST00000634712 MEIS2O14770 477 aa18.04■□□□□ 0.48
LINC00339-207ENST00000634712 TLR3O15455 904 aaKnown RBP18.04■□□□□ 0.48
LINC00339-207ENST00000634712 KPNA6O60684 536 aa18.04■□□□□ 0.48
LINC00339-207ENST00000634712 NAPAP54920 295 aa18.04■□□□□ 0.48
LINC00339-207ENST00000634712 AKAP17AQ02040 695 aaKnown RBP18.04■□□□□ 0.48
LINC00339-207ENST00000634712 ITGA7Q13683 1181 aa18.04■□□□□ 0.48
LINC00339-207ENST00000634712 ANKRD33Q7Z3H0 272 aa18.04■□□□□ 0.48
LINC00339-207ENST00000634712 GDF15Q99988 308 aa18.04■□□□□ 0.48
LINC00339-207ENST00000634712 SEZ6LQ9BYH1 1024 aa18.04■□□□□ 0.48
LINC00339-207ENST00000634712 UPF3BQ9BZI7 483 aaKnown RBP18.04■□□□□ 0.48
LINC00339-207ENST00000634712 UBE2OQ9C0C9 1292 aaKnown RBP18.04■□□□□ 0.48
LINC00339-207ENST00000634712 PDLIM7Q9NR12 457 aa18.04■□□□□ 0.48
LINC00339-207ENST00000634712 FAM217BQ9NTX9 383 aaPredicted RBP18.04■□□□□ 0.48
LINC00339-207ENST00000634712 PDRG1Q9NUG6 133 aa18.04■□□□□ 0.48
LINC00339-207ENST00000634712 TMEM39AQ9NV64 488 aa18.04■□□□□ 0.48
LINC00339-207ENST00000634712 DDX41Q9UJV9 622 aaKnown RBP18.04■□□□□ 0.48
LINC00339-207ENST00000634712 SPDYE3A6NKU9 549 aa18.04■□□□□ 0.48
LINC00339-207ENST00000634712 hCG_1984214I3L0E3 225 aa18.04■□□□□ 0.48
LINC00339-207ENST00000634712 STAM2O75886 525 aa18.04■□□□□ 0.48
LINC00339-207ENST00000634712 BMP8BP34820 402 aa18.04■□□□□ 0.48
LINC00339-207ENST00000634712 FUT2Q10981 343 aa18.04■□□□□ 0.48
LINC00339-207ENST00000634712 GNPTABQ3T906 1256 aa18.04■□□□□ 0.48
LINC00339-207ENST00000634712 WWC2Q6AWC2 1192 aa18.04■□□□□ 0.48
LINC00339-207ENST00000634712 DHX37Q8IY37 1157 aaKnown RBP18.04■□□□□ 0.48
LINC00339-207ENST00000634712 ZNF713Q8N859 430 aaPredicted RBP18.04■□□□□ 0.48
LINC00339-207ENST00000634712 IL31RAQ8NI17 732 aa18.04■□□□□ 0.48
LINC00339-207ENST00000634712 MTG1Q9BT17 334 aaPredicted RBP18.04■□□□□ 0.48
LINC00339-207ENST00000634712 A6NJR5 290 aa18.03■□□□□ 0.48
LINC00339-207ENST00000634712 TGFB3P10600 412 aa18.03■□□□□ 0.48
LINC00339-207ENST00000634712 PDIA3P30101 505 aaKnown RBP18.03■□□□□ 0.48
LINC00339-207ENST00000634712 CDK7P50613 346 aa18.03■□□□□ 0.48
LINC00339-207ENST00000634712 ANAPC15P60006 121 aa18.03■□□□□ 0.48
LINC00339-207ENST00000634712 CCT2P78371 535 aaKnown RBP18.03■□□□□ 0.48
LINC00339-207ENST00000634712 LAMC2Q13753 1193 aa18.03■□□□□ 0.48
LINC00339-207ENST00000634712 PPP1R18Q6NYC8 613 aa18.03■□□□□ 0.48
LINC00339-207ENST00000634712 SH3RF1Q7Z6J0 888 aa18.03■□□□□ 0.48
LINC00339-207ENST00000634712 ZFP91Q96JP5 570 aaPredicted RBP18.03■□□□□ 0.48
LINC00339-207ENST00000634712 EHMT1Q9H9B1 1298 aa18.03■□□□□ 0.48
LINC00339-207ENST00000634712 A0A1W2PPC1 479 aa18.02■□□□□ 0.47
LINC00339-207ENST00000634712 TRIM43BA6NCK2 446 aa18.02■□□□□ 0.47
LINC00339-207ENST00000634712 RAG1P15918 1043 aa18.02■□□□□ 0.47
LINC00339-207ENST00000634712 PSMC6P62333 389 aa18.02■□□□□ 0.47
LINC00339-207ENST00000634712 PURAQ00577 322 aaKnown RBP18.02■□□□□ 0.47
LINC00339-207ENST00000634712 FAAP100Q0VG06 881 aa18.02■□□□□ 0.47
LINC00339-207ENST00000634712 TOB2Q14106 344 aaPredicted RBP18.02■□□□□ 0.47
LINC00339-207ENST00000634712 UBE2SQ16763 222 aa18.02■□□□□ 0.47
LINC00339-207ENST00000634712 XRRA1Q6P2D8 792 aa18.02■□□□□ 0.47
LINC00339-207ENST00000634712 AFG1LQ8WV93 481 aa18.02■□□□□ 0.47
LINC00339-207ENST00000634712 TRIM43Q96BQ3 446 aaPredicted RBP18.02■□□□□ 0.47
LINC00339-207ENST00000634712 GLT8D2Q9H1C3 349 aa18.02■□□□□ 0.47
LINC00339-207ENST00000634712 PRO3102Q9H379 93 aa18.02■□□□□ 0.47
LINC00339-207ENST00000634712 BARHL2Q9NY43 387 aa18.02■□□□□ 0.47
LINC00339-207ENST00000634712 RTEL1Q9NZ71 1219 aa18.02■□□□□ 0.47
LINC00339-207ENST00000634712 KIAA1217Q5T5P2 1943 aa18.01■□□□□ 0.47
LINC00339-207ENST00000634712 SMCO2A6NFE2 343 aa18.01■□□□□ 0.47
LINC00339-207ENST00000634712 RGS20O76081 388 aa18.01■□□□□ 0.47
LINC00339-207ENST00000634712 ADCY7P51828 1080 aa18.01■□□□□ 0.47
LINC00339-207ENST00000634712 EVCP57679 992 aa18.01■□□□□ 0.47
LINC00339-207ENST00000634712 CHMP4BP1P59074 171 aa18.01■□□□□ 0.47
LINC00339-207ENST00000634712 ARHGAP1Q07960 439 aa18.01■□□□□ 0.47
LINC00339-207ENST00000634712 PFKFB3Q16875 520 aaPredicted RBP18.01■□□□□ 0.47
LINC00339-207ENST00000634712 PCNX4Q63HM2 1172 aa18.01■□□□□ 0.47
LINC00339-207ENST00000634712 BADQ92934 168 aa18.01■□□□□ 0.47
LINC00339-207ENST00000634712 ZNF274Q96GC6 653 aaPredicted RBP18.01■□□□□ 0.47
LINC00339-207ENST00000634712 MLXIPQ9HAP2 919 aa18.01■□□□□ 0.47
LINC00339-207ENST00000634712 RIC8AQ9NPQ8 531 aa18.01■□□□□ 0.47
LINC00339-207ENST00000634712 PCDH10Q9P2E7 1040 aa18.01■□□□□ 0.47
LINC00339-207ENST00000634712 PCDHA6Q9UN73 950 aa18.01■□□□□ 0.47
LINC00339-207ENST00000634712 PCDHA8Q9Y5H6 950 aa18.01■□□□□ 0.47
LINC00339-207ENST00000634712 FRMPD4Q14CM0 1322 aa18.01■□□□□ 0.47
LINC00339-207ENST00000634712 STXBP3O00186 592 aa18■□□□□ 0.47
LINC00339-207ENST00000634712 CPLX1O14810 134 aa18■□□□□ 0.47
LINC00339-207ENST00000634712 KIAA0355O15063 1070 aa18■□□□□ 0.47
LINC00339-207ENST00000634712 PRPF3O43395 683 aaKnown RBP18■□□□□ 0.47
LINC00339-207ENST00000634712 MMP3P08254 477 aa18■□□□□ 0.47
LINC00339-207ENST00000634712 SCG2P13521 617 aa18■□□□□ 0.47
LINC00339-207ENST00000634712 MRPS9P82933 396 aaKnown RBP18■□□□□ 0.47
LINC00339-207ENST00000634712 DGKDQ16760 1214 aa18■□□□□ 0.47
LINC00339-207ENST00000634712 CPLX2Q6PUV4 134 aaKnown RBP18■□□□□ 0.47
LINC00339-207ENST00000634712 NLRX1Q86UT6 975 aa18■□□□□ 0.47
LINC00339-207ENST00000634712 TEX2Q8IWB9 1127 aa18■□□□□ 0.47
LINC00339-207ENST00000634712 SLC43A3Q8NBI5 491 aa18■□□□□ 0.47
LINC00339-207ENST00000634712 CCDC12Q8WUD4 166 aaPredicted RBP18■□□□□ 0.47
LINC00339-207ENST00000634712 PHKBQ93100 1093 aa18■□□□□ 0.47
LINC00339-207ENST00000634712 LARP6Q9BRS8 491 aaKnown RBP18■□□□□ 0.47
LINC00339-207ENST00000634712 NID2Q14112 1375 aa18■□□□□ 0.47
LINC00339-207ENST00000634712 SORBS3O60504 671 aa17.99■□□□□ 0.47
LINC00339-207ENST00000634712 GGPS1O95749 300 aa17.99■□□□□ 0.47
LINC00339-207ENST00000634712 FOSP01100 380 aaPredicted RBP17.99■□□□□ 0.47
LINC00339-207ENST00000634712 FAM47CQ5HY64 1035 aa17.99■□□□□ 0.47
LINC00339-207ENST00000634712 CELF3Q5SZQ8 465 aaKnown RBP17.99■□□□□ 0.47
LINC00339-207ENST00000634712 FAM126BQ8IXS8 530 aa17.99■□□□□ 0.47
LINC00339-207ENST00000634712 TRIM22Q8IYM9 498 aa17.99■□□□□ 0.47
LINC00339-207ENST00000634712 EMID1Q96A84 441 aaPredicted RBP17.99■□□□□ 0.47
LINC00339-207ENST00000634712 SPATA33Q96N06 139 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms