RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 SKILP12757 684 aa8.02□□□□□ -1.12
BRCA1-230ENST00000634433 ZNF18P17022 549 aa8.02□□□□□ -1.12
BRCA1-230ENST00000634433 SFPQP23246 707 aaKnown RBP eCLIP8.02□□□□□ -1.12
BRCA1-230ENST00000634433 CLK2P49760 499 aaKnown RBP8.02□□□□□ -1.12
BRCA1-230ENST00000634433 FXR2P51116 673 aaKnown RBP eCLIP8.02□□□□□ -1.12
BRCA1-230ENST00000634433 RAD51AP2Q09MP3 1159 aa8.02□□□□□ -1.12
BRCA1-230ENST00000634433 TNIP1Q15025 636 aa8.02□□□□□ -1.12
BRCA1-230ENST00000634433 SPDYE2Q495Y8 402 aa8.02□□□□□ -1.12
BRCA1-230ENST00000634433 FILIP1LQ4L180 1135 aa8.02□□□□□ -1.12
BRCA1-230ENST00000634433 DALRD3Q5D0E6 543 aaKnown RBP8.02□□□□□ -1.12
BRCA1-230ENST00000634433 COL13A1Q5TAT6 717 aaPredicted RBP8.02□□□□□ -1.12
BRCA1-230ENST00000634433 ZNF658Q5TYW1 1059 aaPredicted RBP8.02□□□□□ -1.12
BRCA1-230ENST00000634433 WDR78Q5VTH9 848 aa8.02□□□□□ -1.12
BRCA1-230ENST00000634433 FAM83AQ86UY5 434 aa8.02□□□□□ -1.12
BRCA1-230ENST00000634433 CCDC112Q8NEF3 446 aa8.02□□□□□ -1.12
BRCA1-230ENST00000634433 ANKRD20A12PQ8NF67 263 aa8.02□□□□□ -1.12
BRCA1-230ENST00000634433 PRIMPOLQ96LW4 560 aa8.02□□□□□ -1.12
BRCA1-230ENST00000634433 MFRPQ9BY79 579 aa8.02□□□□□ -1.12
BRCA1-230ENST00000634433 ZSWIM4Q9H7M6 989 aa8.02□□□□□ -1.12
BRCA1-230ENST00000634433 R3HCC1Q9Y3T6 440 aaKnown RBP8.02□□□□□ -1.12
BRCA1-230ENST00000634433 PPP1R3GB7ZBB8 358 aa8.02□□□□□ -1.13
BRCA1-230ENST00000634433 TCP10L2B9ZVM9 353 aa8.02□□□□□ -1.13
BRCA1-230ENST00000634433 CLGNO14967 610 aa8.02□□□□□ -1.13
BRCA1-230ENST00000634433 FOSP01100 380 aaPredicted RBP8.02□□□□□ -1.13
BRCA1-230ENST00000634433 GH2P01242 217 aa8.02□□□□□ -1.13
BRCA1-230ENST00000634433 ATP1A3P13637 1013 aa8.02□□□□□ -1.13
BRCA1-230ENST00000634433 SLC16A2P36021 539 aa8.02□□□□□ -1.13
BRCA1-230ENST00000634433 USP11P51784 963 aa8.02□□□□□ -1.13
BRCA1-230ENST00000634433 FMR1Q06787 632 aaKnown RBP eCLIP8.02□□□□□ -1.13
BRCA1-230ENST00000634433 SPAG1Q07617 926 aa8.02□□□□□ -1.13
BRCA1-230ENST00000634433 LRMPQ12912 555 aa8.02□□□□□ -1.13
BRCA1-230ENST00000634433 IKQ13123 557 aaPredicted RBP8.02□□□□□ -1.13
BRCA1-230ENST00000634433 AP3B2Q13367 1082 aa8.02□□□□□ -1.13
BRCA1-230ENST00000634433 PDAP1Q13442 181 aaKnown RBP8.02□□□□□ -1.13
BRCA1-230ENST00000634433 CUL4BQ13620 913 aa8.02□□□□□ -1.13
BRCA1-230ENST00000634433 QRICH1Q2TAL8 776 aa8.02□□□□□ -1.13
BRCA1-230ENST00000634433 MAP9Q49MG5 647 aa8.02□□□□□ -1.13
BRCA1-230ENST00000634433 SYDE2Q5VT97 1194 aa8.02□□□□□ -1.13
BRCA1-230ENST00000634433 BTNL9Q6UXG8 535 aa8.02□□□□□ -1.13
BRCA1-230ENST00000634433 VSTM4Q8IW00 320 aa8.02□□□□□ -1.13
BRCA1-230ENST00000634433 IGSF22Q8N9C0 903 aa8.02□□□□□ -1.13
BRCA1-230ENST00000634433 JDP2Q8WYK2 163 aa8.02□□□□□ -1.13
BRCA1-230ENST00000634433 PIK3R5Q8WYR1 880 aa8.02□□□□□ -1.13
BRCA1-230ENST00000634433 MTMR9Q96QG7 549 aa8.02□□□□□ -1.13
BRCA1-230ENST00000634433 AMNQ9BXJ7 453 aa8.02□□□□□ -1.13
BRCA1-230ENST00000634433 SH2D4AQ9H788 454 aa8.02□□□□□ -1.13
BRCA1-230ENST00000634433 CHST12Q9NRB3 414 aa8.02□□□□□ -1.13
BRCA1-230ENST00000634433 RYDENQ9NUL5 291 aaKnown RBP8.02□□□□□ -1.13
BRCA1-230ENST00000634433 TMEM260Q9NX78 707 aa8.02□□□□□ -1.13
BRCA1-230ENST00000634433 RWDD2AQ9UIY3 292 aa8.02□□□□□ -1.13
BRCA1-230ENST00000634433 PCDHA1Q9Y5I3 950 aa8.02□□□□□ -1.13
BRCA1-230ENST00000634433 ADAMTSL1Q8N6G6 1762 aa8.02□□□□□ -1.13
BRCA1-230ENST00000634433 FAM196BA6NMK8 535 aa8.01□□□□□ -1.13
BRCA1-230ENST00000634433 CCP110O43303 1012 aa8.01□□□□□ -1.13
BRCA1-230ENST00000634433 GDF11O95390 407 aa8.01□□□□□ -1.13
BRCA1-230ENST00000634433 TECP42680 631 aa8.01□□□□□ -1.13
BRCA1-230ENST00000634433 KCNJ6P48051 423 aa8.01□□□□□ -1.13
BRCA1-230ENST00000634433 CBLBQ13191 982 aa8.01□□□□□ -1.13
BRCA1-230ENST00000634433 CDC37Q16543 378 aaPredicted RBP8.01□□□□□ -1.13
BRCA1-230ENST00000634433 CIAPIN1Q6FI81 312 aa8.01□□□□□ -1.13
BRCA1-230ENST00000634433 FBXO11Q86XK2 927 aa8.01□□□□□ -1.13
BRCA1-230ENST00000634433 SIAH1Q8IUQ4 282 aa8.01□□□□□ -1.13
BRCA1-230ENST00000634433 CDK5RAP3Q96JB5 506 aa8.01□□□□□ -1.13
BRCA1-230ENST00000634433 KCND1Q9NSA2 647 aa8.01□□□□□ -1.13
BRCA1-230ENST00000634433 KBTBD4Q9NVX7 518 aa8.01□□□□□ -1.13
BRCA1-230ENST00000634433 STK17AQ9UEE5 414 aa8.01□□□□□ -1.13
BRCA1-230ENST00000634433 LRWD1Q9UFC0 647 aa8.01□□□□□ -1.13
BRCA1-230ENST00000634433 COL4A3BPQ9Y5P4 624 aa8.01□□□□□ -1.13
BRCA1-230ENST00000634433 MYH4Q9Y623 1939 aa8.01□□□□□ -1.13
BRCA1-230ENST00000634433 SYNRGQ9UMZ2 1314 aa8.01□□□□□ -1.13
BRCA1-230ENST00000634433 ZNF646O15015 1829 aaPredicted RBP8.01□□□□□ -1.13
BRCA1-230ENST00000634433 SPDYE5A6NIY4 337 aa8.01□□□□□ -1.13
BRCA1-230ENST00000634433 PPP1R11O60927 126 aaPredicted RBP8.01□□□□□ -1.13
BRCA1-230ENST00000634433 NDUFB10O96000 172 aa8.01□□□□□ -1.13
BRCA1-230ENST00000634433 TXKP42681 527 aa8.01□□□□□ -1.13
BRCA1-230ENST00000634433 PAK1Q13153 545 aa8.01□□□□□ -1.13
BRCA1-230ENST00000634433 KRT79Q5XKE5 535 aa8.01□□□□□ -1.13
BRCA1-230ENST00000634433 KLHL10Q6JEL2 608 aa8.01□□□□□ -1.13
BRCA1-230ENST00000634433 MOXD1Q6UVY6 613 aa8.01□□□□□ -1.13
BRCA1-230ENST00000634433 CHURC1Q8WUH1 139 aa8.01□□□□□ -1.13
BRCA1-230ENST00000634433 C7orf25Q9BPX7 421 aa8.01□□□□□ -1.13
BRCA1-230ENST00000634433 BLZF1Q9H2G9 400 aa8.01□□□□□ -1.13
BRCA1-230ENST00000634433 PRKAG2Q9UGJ0 569 aa8.01□□□□□ -1.13
BRCA1-230ENST00000634433 DDX25Q9UHL0 483 aaKnown RBP8.01□□□□□ -1.13
BRCA1-230ENST00000634433 PSME4Q14997 1843 aa8.01□□□□□ -1.13
BRCA1-230ENST00000634433 CLRN2A0PK11 232 aa8□□□□□ -1.13
BRCA1-230ENST00000634433 TMEM232C9JQI7 657 aa8□□□□□ -1.13
BRCA1-230ENST00000634433 H7C1D1 291 aa8□□□□□ -1.13
BRCA1-230ENST00000634433 RHOBTB3O94955 611 aa8□□□□□ -1.13
BRCA1-230ENST00000634433 PLCG1P19174 1290 aa8□□□□□ -1.13
BRCA1-230ENST00000634433 SCP2P22307 547 aa8□□□□□ -1.13
BRCA1-230ENST00000634433 RPS12P25398 132 aaKnown RBP8□□□□□ -1.13
BRCA1-230ENST00000634433 CDC25AP30304 524 aa8□□□□□ -1.13
BRCA1-230ENST00000634433 ENOX2Q16206 610 aaKnown RBP8□□□□□ -1.13
BRCA1-230ENST00000634433 SV2BQ7L1I2 683 aa8□□□□□ -1.13
BRCA1-230ENST00000634433 CXorf38Q8TB03 319 aa8□□□□□ -1.13
BRCA1-230ENST00000634433 MTRQ99707 1265 aa8□□□□□ -1.13
BRCA1-230ENST00000634433 TAOK3Q9H2K8 898 aa8□□□□□ -1.13
BRCA1-230ENST00000634433 VEZTQ9HBM0 779 aa8□□□□□ -1.13
BRCA1-230ENST00000634433 GINM1Q9NU53 330 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms