RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 CNOT7Q9UIV1 285 aaKnown RBP6.23□□□□□ -1.41
NEK3-211ENST00000629912 PNMA2Q9UL42 364 aa6.23□□□□□ -1.41
NEK3-211ENST00000629912 CTNND2Q9UQB3 1225 aa6.23□□□□□ -1.41
NEK3-211ENST00000629912 GDAQ9Y2T3 454 aa6.23□□□□□ -1.41
NEK3-211ENST00000629912 RABGAP1Q9Y3P9 1069 aa6.23□□□□□ -1.41
NEK3-211ENST00000629912 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.23□□□□□ -1.41
NEK3-211ENST00000629912 ABCB11O95342 1321 aa6.23□□□□□ -1.41
NEK3-211ENST00000629912 KDM3AQ9Y4C1 1321 aa6.23□□□□□ -1.41
NEK3-211ENST00000629912 ATAD5Q96QE3 1844 aa6.22□□□□□ -1.41
NEK3-211ENST00000629912 A0A1W2PQC6 194 aa6.22□□□□□ -1.41
NEK3-211ENST00000629912 KCNJ18B7U540 433 aa6.22□□□□□ -1.41
NEK3-211ENST00000629912 AKR1B15C9JRZ8 316 aaPredicted RBP6.22□□□□□ -1.41
NEK3-211ENST00000629912 GCOM1H8Y6P7 765 aaPredicted RBP6.22□□□□□ -1.41
NEK3-211ENST00000629912 ARHGAP6O43182 974 aa6.22□□□□□ -1.41
NEK3-211ENST00000629912 POLR2MP0CAP2 368 aa6.22□□□□□ -1.41
NEK3-211ENST00000629912 FDX1P10109 184 aa6.22□□□□□ -1.41
NEK3-211ENST00000629912 TNNT1P13805 278 aa6.22□□□□□ -1.41
NEK3-211ENST00000629912 MUTP22033 750 aa6.22□□□□□ -1.41
NEK3-211ENST00000629912 FECHP22830 423 aa6.22□□□□□ -1.41
NEK3-211ENST00000629912 RPA1P27694 616 aa6.22□□□□□ -1.41
NEK3-211ENST00000629912 CCT6AP40227 531 aaKnown RBP6.22□□□□□ -1.41
NEK3-211ENST00000629912 GMPSP49915 693 aaPredicted RBP6.22□□□□□ -1.41
NEK3-211ENST00000629912 SNAP25P60880 206 aa6.22□□□□□ -1.41
NEK3-211ENST00000629912 ASIC1P78348 528 aa6.22□□□□□ -1.41
NEK3-211ENST00000629912 SPIRE1Q08AE8 756 aa6.22□□□□□ -1.41
NEK3-211ENST00000629912 STK4Q13043 487 aa6.22□□□□□ -1.41
NEK3-211ENST00000629912 KCNJ12Q14500 433 aa6.22□□□□□ -1.41
NEK3-211ENST00000629912 PTPN14Q15678 1187 aa6.22□□□□□ -1.41
NEK3-211ENST00000629912 ECM1Q16610 540 aa6.22□□□□□ -1.41
NEK3-211ENST00000629912 E4F1Q66K89 784 aaPredicted RBP6.22□□□□□ -1.41
NEK3-211ENST00000629912 ANKRD40Q6AI12 368 aa6.22□□□□□ -1.41
NEK3-211ENST00000629912 PPFIBP1Q86W92 1011 aa6.22□□□□□ -1.41
NEK3-211ENST00000629912 FAM114A1Q8IWE2 563 aa6.22□□□□□ -1.41
NEK3-211ENST00000629912 SPICE1Q8N0Z3 855 aa6.22□□□□□ -1.41
NEK3-211ENST00000629912 GUF1Q8N442 669 aaKnown RBP6.22□□□□□ -1.41
NEK3-211ENST00000629912 PRPF38AQ8NAV1 312 aaKnown RBP6.22□□□□□ -1.41
NEK3-211ENST00000629912 ERMNQ8TAM6 284 aa6.22□□□□□ -1.41
NEK3-211ENST00000629912 ZNF507Q8TCN5 953 aa6.22□□□□□ -1.41
NEK3-211ENST00000629912 LPAR1Q92633 364 aa6.22□□□□□ -1.41
NEK3-211ENST00000629912 LENG9Q96B70 501 aa6.22□□□□□ -1.41
NEK3-211ENST00000629912 DNAJC19Q96DA6 116 aa6.22□□□□□ -1.41
NEK3-211ENST00000629912 HOOK2Q96ED9 719 aa6.22□□□□□ -1.41
NEK3-211ENST00000629912 POLR3CQ9BUI4 534 aaPredicted RBP6.22□□□□□ -1.41
NEK3-211ENST00000629912 WDR18Q9BV38 432 aa6.22□□□□□ -1.41
NEK3-211ENST00000629912 NAA15Q9BXJ9 866 aaKnown RBP6.22□□□□□ -1.41
NEK3-211ENST00000629912 SRRTQ9BXP5 876 aaKnown RBP6.22□□□□□ -1.41
NEK3-211ENST00000629912 KIAA1683Q9H0B3 1180 aa6.22□□□□□ -1.41
NEK3-211ENST00000629912 EHMT1Q9H9B1 1298 aa6.22□□□□□ -1.41
NEK3-211ENST00000629912 EXOC1Q9NV70 894 aa6.22□□□□□ -1.41
NEK3-211ENST00000629912 ZNF112Q9UJU3 913 aa6.22□□□□□ -1.41
NEK3-211ENST00000629912 PITPNM2Q9BZ72 1349 aa6.22□□□□□ -1.41
NEK3-211ENST00000629912 DICER1Q9UPY3 1922 aaKnown RBP6.21□□□□□ -1.41
NEK3-211ENST00000629912 IGLV3-22A0A075B6J6 115 aa6.21□□□□□ -1.42
NEK3-211ENST00000629912 SHTN1A0MZ66 631 aa6.21□□□□□ -1.42
NEK3-211ENST00000629912 GOLGA6L9A6NEM1 432 aa6.21□□□□□ -1.42
NEK3-211ENST00000629912 POTEMA6NI47 508 aa6.21□□□□□ -1.42
NEK3-211ENST00000629912 USP27XA6NNY8 438 aa6.21□□□□□ -1.42
NEK3-211ENST00000629912 FAM86B1E9PN63 330 aa6.21□□□□□ -1.42
NEK3-211ENST00000629912 DYNC1I1O14576 645 aa6.21□□□□□ -1.42
NEK3-211ENST00000629912 N4BP3O15049 544 aa6.21□□□□□ -1.42
NEK3-211ENST00000629912 WDR46O15213 610 aaKnown RBP6.21□□□□□ -1.42
NEK3-211ENST00000629912 MSH4O15457 936 aa6.21□□□□□ -1.42
NEK3-211ENST00000629912 ZSCAN12O43309 604 aa6.21□□□□□ -1.42
NEK3-211ENST00000629912 FGFR1OPO95684 399 aaKnown RBP6.21□□□□□ -1.42
NEK3-211ENST00000629912 ICAM1P05362 532 aa6.21□□□□□ -1.42
NEK3-211ENST00000629912 FAM86B2P0C5J1 330 aa6.21□□□□□ -1.42
NEK3-211ENST00000629912 PLA2G4BP0C869 781 aa6.21□□□□□ -1.42
NEK3-211ENST00000629912 SPATA31C1P0DKV0 1188 aa6.21□□□□□ -1.42
NEK3-211ENST00000629912 INPP5BP32019 993 aa6.21□□□□□ -1.42
NEK3-211ENST00000629912 DNM2P50570 870 aa6.21□□□□□ -1.42
NEK3-211ENST00000629912 HSD17B4P51659 736 aa6.21□□□□□ -1.42
NEK3-211ENST00000629912 PRELPP51888 382 aa6.21□□□□□ -1.42
NEK3-211ENST00000629912 PMS1P54277 932 aaKnown RBP6.21□□□□□ -1.42
NEK3-211ENST00000629912 SLC12A3P55017 1021 aa6.21□□□□□ -1.42
NEK3-211ENST00000629912 LRRC63Q05C16 580 aa6.21□□□□□ -1.42
NEK3-211ENST00000629912 RBL2Q08999 1139 aa6.21□□□□□ -1.42
NEK3-211ENST00000629912 TRIM14Q14142 442 aa6.21□□□□□ -1.42
NEK3-211ENST00000629912 USH1GQ495M9 461 aa6.21□□□□□ -1.42
NEK3-211ENST00000629912 PRR16Q569H4 304 aa6.21□□□□□ -1.42
NEK3-211ENST00000629912 HSP90AA4PQ58FG1 418 aa6.21□□□□□ -1.42
NEK3-211ENST00000629912 CEP135Q66GS9 1140 aa6.21□□□□□ -1.42
NEK3-211ENST00000629912 DCAF15Q66K64 600 aa6.21□□□□□ -1.42
NEK3-211ENST00000629912 NIPA1Q7RTP0 329 aa6.21□□□□□ -1.42
NEK3-211ENST00000629912 KCNK18Q7Z418 384 aa6.21□□□□□ -1.42
NEK3-211ENST00000629912 LDHDQ86WU2 507 aa6.21□□□□□ -1.42
NEK3-211ENST00000629912 CATSPER3Q86XQ3 398 aa6.21□□□□□ -1.42
NEK3-211ENST00000629912 CDAN1Q8IWY9 1227 aa6.21□□□□□ -1.42
NEK3-211ENST00000629912 REXO1L1PQ8IX06 675 aa6.21□□□□□ -1.42
NEK3-211ENST00000629912 MICALL2Q8IY33 904 aa6.21□□□□□ -1.42
NEK3-211ENST00000629912 MB21D1Q8N884 522 aa6.21□□□□□ -1.42
NEK3-211ENST00000629912 SYT2Q8N9I0 419 aaPredicted RBP6.21□□□□□ -1.42
NEK3-211ENST00000629912 KIAA0895Q8NCT3 520 aa6.21□□□□□ -1.42
NEK3-211ENST00000629912 TBC1D5Q92609 795 aa6.21□□□□□ -1.42
NEK3-211ENST00000629912 DDX12PQ92771 950 aa6.21□□□□□ -1.42
NEK3-211ENST00000629912 SLC5A5Q92911 643 aa6.21□□□□□ -1.42
NEK3-211ENST00000629912 BAG1Q99933 345 aaPredicted RBP6.21□□□□□ -1.42
NEK3-211ENST00000629912 NUP58Q9BVL2 599 aa6.21□□□□□ -1.42
NEK3-211ENST00000629912 ZNF341Q9BYN7 854 aa6.21□□□□□ -1.42
NEK3-211ENST00000629912 MAF1Q9H063 256 aa6.21□□□□□ -1.42
NEK3-211ENST00000629912 VPS16Q9H269 839 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms