RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 EFCAB14O75071 495 aa23.63■■□□□ 1.37
TARDBP-228ENST00000629725 MX1P20591 662 aa23.63■■□□□ 1.37
TARDBP-228ENST00000629725 ARHGAP1Q07960 439 aa23.63■■□□□ 1.37
TARDBP-228ENST00000629725 CHST3Q7LGC8 479 aa23.63■■□□□ 1.37
TARDBP-228ENST00000629725 CRBNQ96SW2 442 aa23.63■■□□□ 1.37
TARDBP-228ENST00000629725 FGAP02671 866 aa23.62■■□□□ 1.37
TARDBP-228ENST00000629725 SNHG28P0DPA3 235 aa23.62■■□□□ 1.37
TARDBP-228ENST00000629725 IKBKEQ14164 716 aa23.62■■□□□ 1.37
TARDBP-228ENST00000629725 DGKDQ16760 1214 aa23.62■■□□□ 1.37
TARDBP-228ENST00000629725 C7orf31Q8N865 590 aa23.62■■□□□ 1.37
TARDBP-228ENST00000629725 TTC14Q96N46 770 aa23.62■■□□□ 1.37
TARDBP-228ENST00000629725 PIEZO1Q92508 2521 aa23.62■■□□□ 1.37
TARDBP-228ENST00000629725 KCNA5P22460 613 aa23.61■■□□□ 1.37
TARDBP-228ENST00000629725 TCTN1Q2MV58 587 aa23.61■■□□□ 1.37
TARDBP-228ENST00000629725 LEXMQ3ZCV2 418 aa23.61■■□□□ 1.37
TARDBP-228ENST00000629725 FAM178BQ8IXR5 827 aa23.61■■□□□ 1.37
TARDBP-228ENST00000629725 GJD3Q8N144 294 aa23.61■■□□□ 1.37
TARDBP-228ENST00000629725 KATNAL1Q9BW62 490 aa23.61■■□□□ 1.37
TARDBP-228ENST00000629725 HELLSQ9NRZ9 838 aa23.61■■□□□ 1.37
TARDBP-228ENST00000629725 HDAC6Q9UBN7 1215 aa23.61■■□□□ 1.37
TARDBP-228ENST00000629725 MYH7BA7E2Y1 1941 aa23.61■■□□□ 1.37
TARDBP-228ENST00000629725 PRR33A8MZF0 331 aa23.6■■□□□ 1.37
TARDBP-228ENST00000629725 STXBP2Q15833 593 aa23.6■■□□□ 1.37
TARDBP-228ENST00000629725 GPATCH4Q5T3I0 446 aaKnown RBP23.6■■□□□ 1.37
TARDBP-228ENST00000629725 FAM117BQ6P1L5 589 aa23.6■■□□□ 1.37
TARDBP-228ENST00000629725 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.6■■□□□ 1.37
TARDBP-228ENST00000629725 NSUN6Q8TEA1 469 aaKnown RBP23.6■■□□□ 1.37
TARDBP-228ENST00000629725 MAF1Q9H063 256 aa23.6■■□□□ 1.37
TARDBP-228ENST00000629725 PTK7Q13308 1070 aa23.59■■□□□ 1.37
TARDBP-228ENST00000629725 TBC1D5Q92609 795 aa23.59■■□□□ 1.37
TARDBP-228ENST00000629725 EVI5LQ96CN4 794 aa23.59■■□□□ 1.37
TARDBP-228ENST00000629725 TAAR1Q96RJ0 339 aa23.59■■□□□ 1.37
TARDBP-228ENST00000629725 IWS1Q96ST2 819 aa23.59■■□□□ 1.37
TARDBP-228ENST00000629725 ALG1Q9BT22 464 aa23.59■■□□□ 1.37
TARDBP-228ENST00000629725 INSL6Q9Y581 213 aa23.59■■□□□ 1.37
TARDBP-228ENST00000629725 MYH6P13533 1939 aa23.59■■□□□ 1.37
TARDBP-228ENST00000629725 C5orf42Q9H799 3197 aa23.58■■□□□ 1.37
TARDBP-228ENST00000629725 GOLGA8HP0CJ92 632 aa23.58■■□□□ 1.37
TARDBP-228ENST00000629725 SSTR3P32745 418 aaPredicted RBP23.58■■□□□ 1.37
TARDBP-228ENST00000629725 PSEN2P49810 448 aa23.58■■□□□ 1.37
TARDBP-228ENST00000629725 ZNF618Q5T7W0 954 aa23.58■■□□□ 1.37
TARDBP-228ENST00000629725 DIEXFQ68CQ4 756 aaKnown RBP23.58■■□□□ 1.37
TARDBP-228ENST00000629725 SYTL5Q8TDW5 730 aaPredicted RBP23.58■■□□□ 1.37
TARDBP-228ENST00000629725 DDX41Q9UJV9 622 aaKnown RBP23.58■■□□□ 1.37
TARDBP-228ENST00000629725 ABCB11O95342 1321 aa23.58■■□□□ 1.36
TARDBP-228ENST00000629725 IL9P15248 144 aa23.57■■□□□ 1.36
TARDBP-228ENST00000629725 HAND2P61296 217 aa23.57■■□□□ 1.36
TARDBP-228ENST00000629725 MFSD10Q14728 455 aa23.57■■□□□ 1.36
TARDBP-228ENST00000629725 KIAA0753Q2KHM9 967 aa23.57■■□□□ 1.36
TARDBP-228ENST00000629725 PTCRAQ6ISU1 281 aaPredicted RBP23.57■■□□□ 1.36
TARDBP-228ENST00000629725 MFSD6Q6ZSS7 791 aa23.57■■□□□ 1.36
TARDBP-228ENST00000629725 FBXO22Q8NEZ5 403 aa23.57■■□□□ 1.36
TARDBP-228ENST00000629725 EMID1Q96A84 441 aaPredicted RBP23.57■■□□□ 1.36
TARDBP-228ENST00000629725 RMDN3Q96TC7 470 aa23.57■■□□□ 1.36
TARDBP-228ENST00000629725 UBA5Q9GZZ9 404 aa23.57■■□□□ 1.36
TARDBP-228ENST00000629725 CPVLQ9H3G5 476 aa23.57■■□□□ 1.36
TARDBP-228ENST00000629725 COL20A1Q9P218 1284 aa23.57■■□□□ 1.36
TARDBP-228ENST00000629725 MICAL3Q7RTP6 2002 aa23.57■■□□□ 1.36
TARDBP-228ENST00000629725 F2P00734 622 aa23.56■■□□□ 1.36
TARDBP-228ENST00000629725 HSPD1P10809 573 aaKnown RBP23.56■■□□□ 1.36
TARDBP-228ENST00000629725 PCP11498 1178 aaKnown RBP23.56■■□□□ 1.36
TARDBP-228ENST00000629725 ALADP13716 330 aa23.56■■□□□ 1.36
TARDBP-228ENST00000629725 CDC37Q16543 378 aaPredicted RBP23.56■■□□□ 1.36
TARDBP-228ENST00000629725 MCMDC2Q4G0Z9 681 aa23.56■■□□□ 1.36
TARDBP-228ENST00000629725 TRAF7Q6Q0C0 670 aa23.56■■□□□ 1.36
TARDBP-228ENST00000629725 ALYREFQ86V81 257 aaKnown RBP23.56■■□□□ 1.36
TARDBP-228ENST00000629725 MCF2L2Q86YR7 1114 aa23.56■■□□□ 1.36
TARDBP-228ENST00000629725 PPTC7Q8NI37 304 aa23.56■■□□□ 1.36
TARDBP-228ENST00000629725 FAM227BQ96M60 508 aa23.56■■□□□ 1.36
TARDBP-228ENST00000629725 C17orf80Q9BSJ5 609 aa23.56■■□□□ 1.36
TARDBP-228ENST00000629725 CTNNA3Q9UI47 895 aa23.56■■□□□ 1.36
TARDBP-228ENST00000629725 ZMYM6O95789 1325 aa23.56■■□□□ 1.36
TARDBP-228ENST00000629725 SALL3Q9BXA9 1300 aa23.56■■□□□ 1.36
TARDBP-228ENST00000629725 LGR5O75473 907 aa23.55■■□□□ 1.36
TARDBP-228ENST00000629725 ZNF286BP0CG31 522 aa23.55■■□□□ 1.36
TARDBP-228ENST00000629725 LAMC2Q13753 1193 aa23.55■■□□□ 1.36
TARDBP-228ENST00000629725 MBTPS1Q14703 1052 aa23.55■■□□□ 1.36
TARDBP-228ENST00000629725 TRIM71Q2Q1W2 868 aaKnown RBP23.55■■□□□ 1.36
TARDBP-228ENST00000629725 ARHGEF16Q5VV41 709 aa23.55■■□□□ 1.36
TARDBP-228ENST00000629725 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.55■■□□□ 1.361e-28■■■■■ 32.6
TARDBP-228ENST00000629725 WNT8BQ93098 351 aa23.55■■□□□ 1.36
TARDBP-228ENST00000629725 MRVI1Q9Y6F6 885 aa23.55■■□□□ 1.36
TARDBP-228ENST00000629725 EMSYQ7Z589 1322 aa23.55■■□□□ 1.36
TARDBP-228ENST00000629725 A0A0D9SFI3 127 aa23.54■■□□□ 1.36
TARDBP-228ENST00000629725 GRXCR2A6NFK2 248 aa23.54■■□□□ 1.36
TARDBP-228ENST00000629725 HAS3O00219 553 aa23.54■■□□□ 1.36
TARDBP-228ENST00000629725 EIF3JO75822 258 aaKnown RBP23.54■■□□□ 1.36
TARDBP-228ENST00000629725 AMHP03971 560 aa23.54■■□□□ 1.36
TARDBP-228ENST00000629725 ZNF200P98182 395 aaPredicted RBP23.54■■□□□ 1.36
TARDBP-228ENST00000629725 PUS10Q3MIT2 529 aaKnown RBP23.54■■□□□ 1.36
TARDBP-228ENST00000629725 DHX37Q8IY37 1157 aaKnown RBP23.54■■□□□ 1.36
TARDBP-228ENST00000629725 MYOCDQ8IZQ8 938 aa23.54■■□□□ 1.36
TARDBP-228ENST00000629725 MRPL38Q96DV4 380 aaKnown RBP23.54■■□□□ 1.36
TARDBP-228ENST00000629725 UIMC1Q96RL1 719 aa23.54■■□□□ 1.36
TARDBP-228ENST00000629725 PCDHB15Q9Y5E8 787 aa23.54■■□□□ 1.36
TARDBP-228ENST00000629725 TRIOO75962 3097 aa23.54■■□□□ 1.36
TARDBP-228ENST00000629725 RBAK-RBAKDNI3L0D1 243 aa23.53■■□□□ 1.36
TARDBP-228ENST00000629725 EIF2AK2P19525 551 aaKnown RBP23.53■■□□□ 1.36
TARDBP-228ENST00000629725 PTPROQ16827 1216 aa23.53■■□□□ 1.36
TARDBP-228ENST00000629725 CSPP1Q1MSJ5 1256 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms