RNA–Protein interactions for RNA: ENST00000629346.2

CHD2-218, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 1,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-218ENST00000629346 ZKSCAN2Q63HK3 967 aa14.15□□□□□ -0.14
CHD2-218ENST00000629346 ASCL5Q7RTU5 278 aa14.15□□□□□ -0.14
CHD2-218ENST00000629346 FBXO11Q86XK2 927 aa14.15□□□□□ -0.14
CHD2-218ENST00000629346 CLASRPQ8N2M8 674 aaKnown RBP14.15□□□□□ -0.14
CHD2-218ENST00000629346 DBF4BQ8NFT6 615 aa14.15□□□□□ -0.14
CHD2-218ENST00000629346 AFG1LQ8WV93 481 aa14.15□□□□□ -0.14
CHD2-218ENST00000629346 ALG1Q9BT22 464 aa14.15□□□□□ -0.14
CHD2-218ENST00000629346 ALG13Q9NP73 1137 aaKnown RBP14.15□□□□□ -0.14
CHD2-218ENST00000629346 HDAC6Q9UBN7 1215 aa14.15□□□□□ -0.14
CHD2-218ENST00000629346 GSG1L2A8MUP6 293 aa14.14□□□□□ -0.15
CHD2-218ENST00000629346 LINC01565O15544 149 aa14.14□□□□□ -0.15
CHD2-218ENST00000629346 TBX10O75333 385 aa14.14□□□□□ -0.15
CHD2-218ENST00000629346 ARIH2O95376 493 aa14.14□□□□□ -0.15
CHD2-218ENST00000629346 TSPY3P0CV98 308 aa14.14□□□□□ -0.15
CHD2-218ENST00000629346 TSPY8P0CW00 308 aa14.14□□□□□ -0.15
CHD2-218ENST00000629346 HYAL1Q12794 435 aa14.14□□□□□ -0.15
CHD2-218ENST00000629346 SMAD4Q13485 552 aaKnown RBP14.14□□□□□ -0.15
CHD2-218ENST00000629346 SLC30A10Q6XR72 485 aa14.14□□□□□ -0.15
CHD2-218ENST00000629346 RASGRP2Q7LDG7 609 aa14.14□□□□□ -0.15
CHD2-218ENST00000629346 CHST3Q7LGC8 479 aa14.14□□□□□ -0.15
CHD2-218ENST00000629346 ERMP1Q7Z2K6 904 aa14.14□□□□□ -0.15
CHD2-218ENST00000629346 SESTD1Q86VW0 696 aa14.14□□□□□ -0.15
CHD2-218ENST00000629346 C7orf31Q8N865 590 aa14.14□□□□□ -0.15
CHD2-218ENST00000629346 WNT8BQ93098 351 aa14.14□□□□□ -0.15
CHD2-218ENST00000629346 GMCL1Q96IK5 515 aa14.14□□□□□ -0.15
CHD2-218ENST00000629346 CD207Q9UJ71 328 aa14.14□□□□□ -0.15
CHD2-218ENST00000629346 SYNPO2Q9UMS6 1093 aa14.14□□□□□ -0.15
CHD2-218ENST00000629346 MYO7AQ13402 2215 aa14.13□□□□□ -0.15
CHD2-218ENST00000629346 ICAM1P05362 532 aa14.13□□□□□ -0.15
CHD2-218ENST00000629346 AVPR2P30518 371 aa14.13□□□□□ -0.15
CHD2-218ENST00000629346 RBL2Q08999 1139 aa14.13□□□□□ -0.15
CHD2-218ENST00000629346 RCSD1Q6JBY9 416 aa14.13□□□□□ -0.15
CHD2-218ENST00000629346 CEP85Q6P2H3 762 aa14.13□□□□□ -0.15
CHD2-218ENST00000629346 TRAF7Q6Q0C0 670 aa14.13□□□□□ -0.15
CHD2-218ENST00000629346 ITPRIPQ8IWB1 547 aa14.13□□□□□ -0.15
CHD2-218ENST00000629346 KAT2BQ92831 832 aa14.13□□□□□ -0.15
CHD2-218ENST00000629346 STRBPQ96SI9 672 aaKnown RBP14.13□□□□□ -0.15
CHD2-218ENST00000629346 IRF2BPLQ9H1B7 796 aa14.13□□□□□ -0.15
CHD2-218ENST00000629346 ZNF287Q9HBT7 754 aa14.13□□□□□ -0.15
CHD2-218ENST00000629346 GTF2IRD1Q9UHL9 959 aa14.13□□□□□ -0.15
CHD2-218ENST00000629346 KMT2EQ8IZD2 1858 aa14.12□□□□□ -0.15
CHD2-218ENST00000629346 MMP3P08254 477 aa14.12□□□□□ -0.15
CHD2-218ENST00000629346 CASTP20810 708 aaKnown RBP14.12□□□□□ -0.15
CHD2-218ENST00000629346 CTNNB1P35222 781 aa14.12□□□□□ -0.15
CHD2-218ENST00000629346 ID4P47928 161 aa14.12□□□□□ -0.15
CHD2-218ENST00000629346 ZNF200P98182 395 aaPredicted RBP14.12□□□□□ -0.15
CHD2-218ENST00000629346 TFAP4Q01664 338 aa14.12□□□□□ -0.15
CHD2-218ENST00000629346 PTK7Q13308 1070 aa14.12□□□□□ -0.15
CHD2-218ENST00000629346 NEDD1Q8NHV4 660 aa14.12□□□□□ -0.15
CHD2-218ENST00000629346 FSD1Q9BTV5 496 aa14.12□□□□□ -0.15
CHD2-218ENST00000629346 TRPC6Q9Y210 931 aa14.12□□□□□ -0.15
CHD2-218ENST00000629346 MYO15AQ9UKN7 3530 aa14.12□□□□□ -0.15
CHD2-218ENST00000629346 CACNA1HO95180 2353 aa14.11□□□□□ -0.15
CHD2-218ENST00000629346 LOC102724159A0A0B4J2E5 919 aa14.11□□□□□ -0.15
CHD2-218ENST00000629346 GRM6O15303 877 aa14.11□□□□□ -0.15
CHD2-218ENST00000629346 PLA2G6O60733 806 aa14.11□□□□□ -0.15
CHD2-218ENST00000629346 KDM4AO75164 1064 aa14.11□□□□□ -0.15
CHD2-218ENST00000629346 APPP05067 770 aa14.11□□□□□ -0.15
CHD2-218ENST00000629346 SLC16A2P36021 539 aa14.11□□□□□ -0.15
CHD2-218ENST00000629346 TDO2P48775 406 aa14.11□□□□□ -0.15
CHD2-218ENST00000629346 SIGLEC14Q08ET2 396 aa14.11□□□□□ -0.15
CHD2-218ENST00000629346 PWP2Q15269 919 aaKnown RBP14.11□□□□□ -0.15
CHD2-218ENST00000629346 LY6KQ17RY6 165 aa14.11□□□□□ -0.15
CHD2-218ENST00000629346 TRIM71Q2Q1W2 868 aaKnown RBP14.11□□□□□ -0.15
CHD2-218ENST00000629346 HSP90AB4PQ58FF6 505 aa14.11□□□□□ -0.15
CHD2-218ENST00000629346 ZSCAN25Q6NSZ9 544 aa14.11□□□□□ -0.15
CHD2-218ENST00000629346 RNF207Q6ZRF8 634 aa14.11□□□□□ -0.15
CHD2-218ENST00000629346 TOP1MTQ969P6 601 aa14.11□□□□□ -0.15
CHD2-218ENST00000629346 MPHOSPH6Q99547 160 aaKnown RBP14.11□□□□□ -0.15
CHD2-218ENST00000629346 HAUS7Q99871 368 aa14.11□□□□□ -0.15
CHD2-218ENST00000629346 STX8Q9UNK0 236 aa14.11□□□□□ -0.15
CHD2-218ENST00000629346 COL4A6Q14031 1691 aa14.1□□□□□ -0.15
CHD2-218ENST00000629346 PRR23AA6NEV1 266 aa14.1□□□□□ -0.15
CHD2-218ENST00000629346 RSPH10B2B2RC85 870 aa14.1□□□□□ -0.15
CHD2-218ENST00000629346 GH1P01241 217 aa14.1□□□□□ -0.15
CHD2-218ENST00000629346 RSPH10BP0C881 870 aa14.1□□□□□ -0.15
CHD2-218ENST00000629346 ATP5JP18859 108 aa14.1□□□□□ -0.15
CHD2-218ENST00000629346 THPOP40225 353 aa14.1□□□□□ -0.15
CHD2-218ENST00000629346 PSEN2P49810 448 aa14.1□□□□□ -0.15
CHD2-218ENST00000629346 NDUFV1P49821 464 aa14.1□□□□□ -0.15
CHD2-218ENST00000629346 CCDC96Q2M329 555 aa14.1□□□□□ -0.15
CHD2-218ENST00000629346 GIMAP6Q6P9H5 292 aa14.1□□□□□ -0.15
CHD2-218ENST00000629346 SEPT14Q6ZU15 432 aa14.1□□□□□ -0.15
CHD2-218ENST00000629346 FTSJ3Q8IY81 847 aaKnown RBP14.1□□□□□ -0.15
CHD2-218ENST00000629346 KIF1BPQ96EK5 621 aa14.1□□□□□ -0.15
CHD2-218ENST00000629346 EMSYQ7Z589 1322 aa14.1□□□□□ -0.15
CHD2-218ENST00000629346 PLXNA3P51805 1871 aa14.1□□□□□ -0.15
CHD2-218ENST00000629346 MICAL3Q7RTP6 2002 aa14.09□□□□□ -0.15
CHD2-218ENST00000629346 LOC730098B7Z3J9 87 aa14.09□□□□□ -0.15
CHD2-218ENST00000629346 PROB1E7EW31 1015 aa14.09□□□□□ -0.15
CHD2-218ENST00000629346 RGS20O76081 388 aa14.09□□□□□ -0.15
CHD2-218ENST00000629346 ZNF286BP0CG31 522 aa14.09□□□□□ -0.15
CHD2-218ENST00000629346 RPS6P62753 249 aaKnown RBP14.09□□□□□ -0.15
CHD2-218ENST00000629346 ARHGAP1Q07960 439 aa14.09□□□□□ -0.15
CHD2-218ENST00000629346 MFSD10Q14728 455 aa14.09□□□□□ -0.15
CHD2-218ENST00000629346 KIAA0753Q2KHM9 967 aa14.09□□□□□ -0.15
CHD2-218ENST00000629346 PLEKHG4Q58EX7 1191 aa14.09□□□□□ -0.15
CHD2-218ENST00000629346 TTBK2Q6IQ55 1244 aa14.09□□□□□ -0.15
CHD2-218ENST00000629346 DHX37Q8IY37 1157 aaKnown RBP14.09□□□□□ -0.15
CHD2-218ENST00000629346 FIBCD1Q8N539 461 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms