RNA–Protein interactions for RNA: ENST00000626466.1

TCF4-253, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-253ENST00000626466 USH1GQ495M9 461 aa12.47□□□□□ -0.41
TCF4-253ENST00000626466 PPP4R3BQ5MIZ7 849 aa12.47□□□□□ -0.41
TCF4-253ENST00000626466 CHST3Q7LGC8 479 aa12.47□□□□□ -0.41
TCF4-253ENST00000626466 AFAP1L1Q8TED9 768 aa12.47□□□□□ -0.41
TCF4-253ENST00000626466 CHMP4BQ9H444 224 aaKnown RBP12.47□□□□□ -0.41
TCF4-253ENST00000626466 TOMM22Q9NS69 142 aa12.47□□□□□ -0.41
TCF4-253ENST00000626466 HDAC6Q9UBN7 1215 aa12.47□□□□□ -0.41
TCF4-253ENST00000626466 PCDHB15Q9Y5E8 787 aa12.47□□□□□ -0.41
TCF4-253ENST00000626466 WDR19Q8NEZ3 1342 aa12.46□□□□□ -0.41
TCF4-253ENST00000626466 A0A0D9SFI3 127 aa12.46□□□□□ -0.41
TCF4-253ENST00000626466 KPNA6O60684 536 aa12.46□□□□□ -0.41
TCF4-253ENST00000626466 GJB5O95377 273 aa12.46□□□□□ -0.41
TCF4-253ENST00000626466 CXCL10P02778 98 aa12.46□□□□□ -0.41
TCF4-253ENST00000626466 ZNF286BP0CG31 522 aa12.46□□□□□ -0.41
TCF4-253ENST00000626466 GOLGA8HP0CJ92 632 aa12.46□□□□□ -0.41
TCF4-253ENST00000626466 CKBP12277 381 aa12.46□□□□□ -0.41
TCF4-253ENST00000626466 IL9P15248 144 aa12.46□□□□□ -0.41
TCF4-253ENST00000626466 HAND2P61296 217 aa12.46□□□□□ -0.41
TCF4-253ENST00000626466 ERVK-21P61565 698 aa12.46□□□□□ -0.41
TCF4-253ENST00000626466 RBL2Q08999 1139 aa12.46□□□□□ -0.41
TCF4-253ENST00000626466 BRDTQ58F21 947 aaPredicted RBP12.46□□□□□ -0.41
TCF4-253ENST00000626466 SEPT14Q6ZU15 432 aa12.46□□□□□ -0.41
TCF4-253ENST00000626466 TBC1D10CQ8IV04 446 aa12.46□□□□□ -0.41
TCF4-253ENST00000626466 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.46□□□□□ -0.41
TCF4-253ENST00000626466 FAM227BQ96M60 508 aa12.46□□□□□ -0.41
TCF4-253ENST00000626466 TAAR1Q96RJ0 339 aa12.46□□□□□ -0.41
TCF4-253ENST00000626466 ZBED2Q9BTP6 218 aa12.46□□□□□ -0.41
TCF4-253ENST00000626466 UBA5Q9GZZ9 404 aa12.46□□□□□ -0.41
TCF4-253ENST00000626466 ARIH1Q9Y4X5 557 aaPredicted RBP12.46□□□□□ -0.41
TCF4-253ENST00000626466 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.45□□□□□ -0.42
TCF4-253ENST00000626466 SNHG28P0DPA3 235 aa12.45□□□□□ -0.42
TCF4-253ENST00000626466 MX1P20591 662 aa12.45□□□□□ -0.42
TCF4-253ENST00000626466 KCNA5P22460 613 aa12.45□□□□□ -0.42
TCF4-253ENST00000626466 LRRFIP1Q32MZ4 808 aaKnown RBP12.45□□□□□ -0.42
TCF4-253ENST00000626466 CNKSR3Q6P9H4 555 aa12.45□□□□□ -0.42
TCF4-253ENST00000626466 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.45□□□□□ -0.42
TCF4-253ENST00000626466 ZNF589Q86UQ0 364 aaPredicted RBP12.45□□□□□ -0.42
TCF4-253ENST00000626466 SESTD1Q86VW0 696 aa12.45□□□□□ -0.42
TCF4-253ENST00000626466 FAM178BQ8IXR5 827 aa12.45□□□□□ -0.42
TCF4-253ENST00000626466 DNERQ8NFT8 737 aa12.45□□□□□ -0.42
TCF4-253ENST00000626466 CAGE1Q8TC20 777 aa12.45□□□□□ -0.42
TCF4-253ENST00000626466 SYTL5Q8TDW5 730 aaPredicted RBP12.45□□□□□ -0.42
TCF4-253ENST00000626466 TGS1Q96RS0 853 aaKnown RBP12.45□□□□□ -0.42
TCF4-253ENST00000626466 C17orf80Q9BSJ5 609 aa12.45□□□□□ -0.42
TCF4-253ENST00000626466 ALG1Q9BT22 464 aa12.45□□□□□ -0.42
TCF4-253ENST00000626466 OSBPL7Q9BZF2 842 aa12.45□□□□□ -0.42
TCF4-253ENST00000626466 GTF2IRD1Q9UHL9 959 aa12.45□□□□□ -0.42
TCF4-253ENST00000626466 BDP1A6H8Y1 2624 aa12.45□□□□□ -0.42
TCF4-253ENST00000626466 NCOR1O75376 2440 aa12.45□□□□□ -0.42
TCF4-253ENST00000626466 TRANK1O15050 2925 aa12.44□□□□□ -0.42
TCF4-253ENST00000626466 SORBS3O60504 671 aa12.44□□□□□ -0.42
TCF4-253ENST00000626466 GH1P01241 217 aa12.44□□□□□ -0.42
TCF4-253ENST00000626466 FGAP02671 866 aa12.44□□□□□ -0.42
TCF4-253ENST00000626466 PSEN2P49810 448 aa12.44□□□□□ -0.42
TCF4-253ENST00000626466 ALX1Q15699 326 aa12.44□□□□□ -0.42
TCF4-253ENST00000626466 ZNF618Q5T7W0 954 aa12.44□□□□□ -0.42
TCF4-253ENST00000626466 ALYREFQ86V81 257 aaKnown RBP12.44□□□□□ -0.42
TCF4-253ENST00000626466 ANKS1AQ92625 1134 aa12.44□□□□□ -0.42
TCF4-253ENST00000626466 RAD9AQ99638 391 aa12.44□□□□□ -0.42
TCF4-253ENST00000626466 ZKSCAN3Q9BRR0 538 aa12.44□□□□□ -0.42
TCF4-253ENST00000626466 TCP11L1Q9NUJ3 509 aa12.44□□□□□ -0.42
TCF4-253ENST00000626466 NEDD4P46934 1319 aa12.43□□□□□ -0.42
TCF4-253ENST00000626466 ABHD14A-ACY1A0A1B0GW23 586 aa12.43□□□□□ -0.42
TCF4-253ENST00000626466 HAS3O00219 553 aa12.43□□□□□ -0.42
TCF4-253ENST00000626466 NUBP1P53384 320 aa12.43□□□□□ -0.42
TCF4-253ENST00000626466 CDC37Q16543 378 aaPredicted RBP12.43□□□□□ -0.42
TCF4-253ENST00000626466 LEXMQ3ZCV2 418 aa12.43□□□□□ -0.42
TCF4-253ENST00000626466 GJD3Q8N144 294 aa12.43□□□□□ -0.42
TCF4-253ENST00000626466 CCDC155Q8N6L0 562 aa12.43□□□□□ -0.42
TCF4-253ENST00000626466 LMCD1Q9NZU5 365 aa12.43□□□□□ -0.42
TCF4-253ENST00000626466 SIP14410 1827 aa12.42□□□□□ -0.42
TCF4-253ENST00000626466 TRIP12Q14669 1992 aaPredicted RBP12.42□□□□□ -0.42
TCF4-253ENST00000626466 H3BQ06 376 aaPredicted RBP12.42□□□□□ -0.42
TCF4-253ENST00000626466 F2P00734 622 aa12.42□□□□□ -0.42
TCF4-253ENST00000626466 HSPD1P10809 573 aaKnown RBP12.42□□□□□ -0.42
TCF4-253ENST00000626466 EIF2AK2P19525 551 aaKnown RBP12.42□□□□□ -0.42
TCF4-253ENST00000626466 MFSD10Q14728 455 aa12.42□□□□□ -0.42
TCF4-253ENST00000626466 PTCRAQ6ISU1 281 aaPredicted RBP12.42□□□□□ -0.42
TCF4-253ENST00000626466 BBXQ8WY36 941 aaPredicted RBP12.42□□□□□ -0.42
TCF4-253ENST00000626466 DDX41Q9UJV9 622 aaKnown RBP12.42□□□□□ -0.42
TCF4-253ENST00000626466 OPLAHO14841 1288 aa12.41□□□□□ -0.42
TCF4-253ENST00000626466 LGR5O75473 907 aa12.41□□□□□ -0.42
TCF4-253ENST00000626466 RGS20O76081 388 aa12.41□□□□□ -0.42
TCF4-253ENST00000626466 SSTR3P32745 418 aaPredicted RBP12.41□□□□□ -0.42
TCF4-253ENST00000626466 NMIQ13287 307 aaPredicted RBP12.41□□□□□ -0.42
TCF4-253ENST00000626466 KIAA0753Q2KHM9 967 aa12.41□□□□□ -0.42
TCF4-253ENST00000626466 C7orf31Q8N865 590 aa12.41□□□□□ -0.42
TCF4-253ENST00000626466 FBXO22Q8NEZ5 403 aa12.41□□□□□ -0.42
TCF4-253ENST00000626466 DBF4BQ8NFT6 615 aa12.41□□□□□ -0.42
TCF4-253ENST00000626466 IL31RAQ8NI17 732 aa12.41□□□□□ -0.42
TCF4-253ENST00000626466 ZFP91Q96JP5 570 aaPredicted RBP12.41□□□□□ -0.42
TCF4-253ENST00000626466 UIMC1Q96RL1 719 aa12.41□□□□□ -0.42
TCF4-253ENST00000626466 MPHOSPH6Q99547 160 aaKnown RBP12.41□□□□□ -0.42
TCF4-253ENST00000626466 GRXCR2A6NFK2 248 aa12.4□□□□□ -0.42
TCF4-253ENST00000626466 PRR33A8MZF0 331 aa12.4□□□□□ -0.42
TCF4-253ENST00000626466 CASTP20810 708 aaKnown RBP12.4□□□□□ -0.42
TCF4-253ENST00000626466 HTRA4P83105 476 aaPredicted RBP12.4□□□□□ -0.42
TCF4-253ENST00000626466 PTK7Q13308 1070 aa12.4□□□□□ -0.42
TCF4-253ENST00000626466 IKBKEQ14164 716 aa12.4□□□□□ -0.42
TCF4-253ENST00000626466 DGKDQ16760 1214 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms