RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 RPS6KB1P23443 525 aa25.76■■□□□ 1.71
SF1-220ENST00000626028 PURAQ00577 322 aaKnown RBP25.76■■□□□ 1.71
SF1-220ENST00000626028 MDM2Q00987 491 aaPredicted RBP25.76■■□□□ 1.71
SF1-220ENST00000626028 ITGA7Q13683 1181 aa25.76■■□□□ 1.71
SF1-220ENST00000626028 SEPT14Q6ZU15 432 aa25.76■■□□□ 1.71
SF1-220ENST00000626028 FAM126BQ8IXS8 530 aa25.76■■□□□ 1.71
SF1-220ENST00000626028 ZNF713Q8N859 430 aaPredicted RBP25.76■■□□□ 1.71
SF1-220ENST00000626028 PIBF1Q8WXW3 757 aa25.76■■□□□ 1.71
SF1-220ENST00000626028 TRIM43Q96BQ3 446 aaPredicted RBP25.76■■□□□ 1.71
SF1-220ENST00000626028 NID2Q14112 1375 aa25.76■■□□□ 1.71
SF1-220ENST00000626028 ARIH2O95376 493 aa25.75■■□□□ 1.71
SF1-220ENST00000626028 LRIT3Q3SXY7 679 aa25.75■■□□□ 1.71
SF1-220ENST00000626028 FCHSD1Q86WN1 690 aa25.75■■□□□ 1.71
SF1-220ENST00000626028 CMTR1Q8N1G2 835 aaKnown RBP25.75■■□□□ 1.71
SF1-220ENST00000626028 SMARCC2Q8TAQ2 1214 aa25.75■■□□□ 1.71
SF1-220ENST00000626028 MTG1Q9BT17 334 aaPredicted RBP25.75■■□□□ 1.71
SF1-220ENST00000626028 PSTPIP2Q9H939 334 aa25.75■■□□□ 1.71
SF1-220ENST00000626028 DDX41Q9UJV9 622 aaKnown RBP25.75■■□□□ 1.71
SF1-220ENST00000626028 TBX21Q9UL17 535 aa25.75■■□□□ 1.71
SF1-220ENST00000626028 LAMA3Q16787 3333 aa25.75■■□□□ 1.71
SF1-220ENST00000626028 CNTNAP5Q8WYK1 1306 aa25.74■■□□□ 1.71
SF1-220ENST00000626028 GOLGA8AA7E2F4 631 aa25.74■■□□□ 1.71
SF1-220ENST00000626028 GOLGA8BA8MQT2 603 aa25.74■■□□□ 1.71
SF1-220ENST00000626028 MEIS2O14770 477 aa25.74■■□□□ 1.71
SF1-220ENST00000626028 CD4P01730 458 aa25.74■■□□□ 1.71
SF1-220ENST00000626028 RAG1P15918 1043 aa25.74■■□□□ 1.71
SF1-220ENST00000626028 FUT2Q10981 343 aa25.74■■□□□ 1.71
SF1-220ENST00000626028 Q6ZUG5 572 aa25.74■■□□□ 1.71
SF1-220ENST00000626028 SH3RF1Q7Z6J0 888 aa25.74■■□□□ 1.71
SF1-220ENST00000626028 TM6SF1Q9BZW5 370 aa25.74■■□□□ 1.71
SF1-220ENST00000626028 MRVI1Q9Y6F6 885 aa25.74■■□□□ 1.71
SF1-220ENST00000626028 MYCLP12524 364 aaPredicted RBP25.73■■□□□ 1.71
SF1-220ENST00000626028 CASTP20810 708 aaKnown RBP25.73■■□□□ 1.71
SF1-220ENST00000626028 PTGS1P23219 599 aa25.73■■□□□ 1.71
SF1-220ENST00000626028 EVCP57679 992 aa25.73■■□□□ 1.71
SF1-220ENST00000626028 LAMC2Q13753 1193 aa25.73■■□□□ 1.71
SF1-220ENST00000626028 PPP1R18Q6NYC8 613 aa25.73■■□□□ 1.71
SF1-220ENST00000626028 RAB11FIP4Q86YS3 637 aa25.73■■□□□ 1.71
SF1-220ENST00000626028 ZSWIM6Q9HCJ5 1215 aa25.73■■□□□ 1.71
SF1-220ENST00000626028 GRIN2DO15399 1336 aa25.72■■□□□ 1.71
SF1-220ENST00000626028 ARHGAP1Q07960 439 aa25.72■■□□□ 1.71
SF1-220ENST00000626028 LY6KQ17RY6 165 aa25.72■■□□□ 1.71
SF1-220ENST00000626028 GNPTABQ3T906 1256 aa25.72■■□□□ 1.71
SF1-220ENST00000626028 RUFY3Q7L099 469 aa25.72■■□□□ 1.71
SF1-220ENST00000626028 CCDC82Q8N4S0 544 aa25.72■■□□□ 1.71
SF1-220ENST00000626028 BADQ92934 168 aa25.72■■□□□ 1.71
SF1-220ENST00000626028 BRF1Q92994 677 aa25.72■■□□□ 1.71
SF1-220ENST00000626028 GLT8D2Q9H1C3 349 aa25.72■■□□□ 1.71
SF1-220ENST00000626028 RGS20O76081 388 aa25.71■■□□□ 1.71
SF1-220ENST00000626028 TIMP1P01033 207 aa25.71■■□□□ 1.71
SF1-220ENST00000626028 METAP2P50579 478 aaKnown RBP eCLIP25.71■■□□□ 1.712e-8■□□□□ 10.5
SF1-220ENST00000626028 PTPN11Q06124 597 aaPredicted RBP25.71■■□□□ 1.71
SF1-220ENST00000626028 PCNX4Q63HM2 1172 aa25.71■■□□□ 1.71
SF1-220ENST00000626028 GPR153Q6NV75 609 aa25.71■■□□□ 1.71
SF1-220ENST00000626028 NFRKBQ6P4R8 1299 aa25.71■■□□□ 1.71
SF1-220ENST00000626028 PPTC7Q8NI37 304 aa25.71■■□□□ 1.71
SF1-220ENST00000626028 COPS5Q92905 334 aa25.71■■□□□ 1.71
SF1-220ENST00000626028 INPP4AQ96PE3 977 aaPredicted RBP25.71■■□□□ 1.71
SF1-220ENST00000626028 FAM217BQ9NTX9 383 aaPredicted RBP25.71■■□□□ 1.71
SF1-220ENST00000626028 MYL3P08590 195 aa25.7■■□□□ 1.7
SF1-220ENST00000626028 SUPT20HL2P0C7V6 817 aa25.7■■□□□ 1.7
SF1-220ENST00000626028 CPA1P15085 419 aa25.7■■□□□ 1.7
SF1-220ENST00000626028 ICAM3P32942 547 aa25.7■■□□□ 1.7
SF1-220ENST00000626028 DGKDQ16760 1214 aa25.7■■□□□ 1.7
SF1-220ENST00000626028 USP17L6PQ6QN14 398 aa25.7■■□□□ 1.7
SF1-220ENST00000626028 HEATR3Q7Z4Q2 680 aa25.7■■□□□ 1.7
SF1-220ENST00000626028 IL31RAQ8NI17 732 aa25.7■■□□□ 1.7
SF1-220ENST00000626028 CYP46A1Q9Y6A2 500 aa25.7■■□□□ 1.7
SF1-220ENST00000626028 DOCK5Q9H7D0 1870 aa25.69■■□□□ 1.7
SF1-220ENST00000626028 MMP3P08254 477 aa25.69■■□□□ 1.7
SF1-220ENST00000626028 APOBRQ0VD83 1088 aa25.69■■□□□ 1.7
SF1-220ENST00000626028 DHX37Q8IY37 1157 aaKnown RBP25.69■■□□□ 1.7
SF1-220ENST00000626028 AFG1LQ8WV93 481 aa25.69■■□□□ 1.7
SF1-220ENST00000626028 V9GY48 417 aaPredicted RBP25.69■■□□□ 1.7
SF1-220ENST00000626028 CDC27P30260 824 aa25.68■■□□□ 1.7
SF1-220ENST00000626028 MRPS9P82933 396 aaKnown RBP25.68■■□□□ 1.7
SF1-220ENST00000626028 FPGSQ05932 587 aa25.68■■□□□ 1.7
SF1-220ENST00000626028 MFSD5Q6N075 450 aa25.68■■□□□ 1.7
SF1-220ENST00000626028 ALDH8A1Q9H2A2 487 aaPredicted RBP25.68■■□□□ 1.7
SF1-220ENST00000626028 EHMT1Q9H9B1 1298 aa25.68■■□□□ 1.7
SF1-220ENST00000626028 BARHL2Q9NY43 387 aa25.68■■□□□ 1.7
SF1-220ENST00000626028 LAMA2P24043 3122 aaKnown RBP25.68■■□□□ 1.7
SF1-220ENST00000626028 hCG_1642624A0A1W2PR95 340 aa25.67■■□□□ 1.7
SF1-220ENST00000626028 SPDYE3A6NKU9 549 aa25.67■■□□□ 1.7
SF1-220ENST00000626028 FIBPO43427 364 aa25.67■■□□□ 1.7
SF1-220ENST00000626028 PPFIA4O75335 1185 aa25.67■■□□□ 1.7
SF1-220ENST00000626028 HOXD8P13378 290 aaPredicted RBP25.67■■□□□ 1.7
SF1-220ENST00000626028 ITGB8P26012 769 aa25.67■■□□□ 1.7
SF1-220ENST00000626028 ANAPC15P60006 121 aa25.67■■□□□ 1.7
SF1-220ENST00000626028 PSMC6P62333 389 aa25.67■■□□□ 1.7
SF1-220ENST00000626028 CELF3Q5SZQ8 465 aaKnown RBP25.67■■□□□ 1.7
SF1-220ENST00000626028 MYSM1Q5VVJ2 828 aa25.67■■□□□ 1.7
SF1-220ENST00000626028 WWC2Q6AWC2 1192 aa25.67■■□□□ 1.7
SF1-220ENST00000626028 KATNAL1Q9BW62 490 aa25.67■■□□□ 1.7
SF1-220ENST00000626028 NAP1L2Q9ULW6 460 aaPredicted RBP25.67■■□□□ 1.7
SF1-220ENST00000626028 SZT2Q5T011 3432 aa25.66■■□□□ 1.7
SF1-220ENST00000626028 SPATA31C2B4DYI2 1134 aa25.66■■□□□ 1.7
SF1-220ENST00000626028 FOSP01100 380 aaPredicted RBP25.66■■□□□ 1.7
SF1-220ENST00000626028 NAPAP54920 295 aa25.66■■□□□ 1.7
SF1-220ENST00000626028 NEDD9Q14511 834 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms