RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 EEF1DP3Q658K8 133 aa4.81□□□□□ -1.64
CDKL5-208ENST00000624953 LRP10Q7Z4F1 713 aa4.81□□□□□ -1.64
CDKL5-208ENST00000624953 ANKLE2Q86XL3 938 aa4.81□□□□□ -1.64
CDKL5-208ENST00000624953 KREMEN2Q8NCW0 462 aa4.81□□□□□ -1.64
CDKL5-208ENST00000624953 ST13P5Q8NFI4 369 aaPredicted RBP4.81□□□□□ -1.64
CDKL5-208ENST00000624953 LIN37Q96GY3 246 aaPredicted RBP4.81□□□□□ -1.64
CDKL5-208ENST00000624953 INTS4Q96HW7 963 aaKnown RBP4.81□□□□□ -1.64
CDKL5-208ENST00000624953 APBA2Q99767 749 aa4.81□□□□□ -1.64
CDKL5-208ENST00000624953 DSCC1Q9BVC3 393 aa4.81□□□□□ -1.64
CDKL5-208ENST00000624953 NKX2-4Q9H2Z4 354 aa4.81□□□□□ -1.64
CDKL5-208ENST00000624953 FAM53CQ9NYF3 392 aa4.81□□□□□ -1.64
CDKL5-208ENST00000624953 AHDC1Q5TGY3 1603 aaPredicted RBP4.81□□□□□ -1.64
CDKL5-208ENST00000624953 CCNB3Q8WWL7 1395 aa4.8□□□□□ -1.64
CDKL5-208ENST00000624953 KIF3BO15066 747 aa4.8□□□□□ -1.64
CDKL5-208ENST00000624953 TBX1O43435 398 aa4.8□□□□□ -1.64
CDKL5-208ENST00000624953 FKTNO75072 461 aa4.8□□□□□ -1.64
CDKL5-208ENST00000624953 ITGAVP06756 1048 aa4.8□□□□□ -1.64
CDKL5-208ENST00000624953 NOP2P46087 812 aaKnown RBP4.8□□□□□ -1.64
CDKL5-208ENST00000624953 MVKQ03426 396 aa4.8□□□□□ -1.64
CDKL5-208ENST00000624953 CBX2Q14781 532 aaPredicted RBP4.8□□□□□ -1.64
CDKL5-208ENST00000624953 KIR3DS1Q14943 382 aa4.8□□□□□ -1.64
CDKL5-208ENST00000624953 FBLN7Q53RD9 439 aa4.8□□□□□ -1.64
CDKL5-208ENST00000624953 GTF2IRD2BQ6EKJ0 949 aa4.8□□□□□ -1.64
CDKL5-208ENST00000624953 GTF2IRD2Q86UP8 949 aa4.8□□□□□ -1.64
CDKL5-208ENST00000624953 Q8N1Y9 231 aa4.8□□□□□ -1.64
CDKL5-208ENST00000624953 JMYQ8N9B5 988 aa4.8□□□□□ -1.64
CDKL5-208ENST00000624953 ADCY4Q8NFM4 1077 aa4.8□□□□□ -1.64
CDKL5-208ENST00000624953 SGSM3Q96HU1 749 aa4.8□□□□□ -1.64
CDKL5-208ENST00000624953 ZDHHC15Q96MV8 337 aa4.8□□□□□ -1.64
CDKL5-208ENST00000624953 MMP19Q99542 508 aa4.8□□□□□ -1.64
CDKL5-208ENST00000624953 CCDC113Q9H0I3 377 aa4.8□□□□□ -1.64
CDKL5-208ENST00000624953 ZNF552Q9H707 407 aaPredicted RBP4.8□□□□□ -1.64
CDKL5-208ENST00000624953 CYP26B1Q9NR63 512 aa4.8□□□□□ -1.64
CDKL5-208ENST00000624953 AKT3Q9Y243 479 aa4.8□□□□□ -1.64
CDKL5-208ENST00000624953 BACE2Q9Y5Z0 518 aa4.8□□□□□ -1.64
CDKL5-208ENST00000624953 NALCNQ8IZF0 1738 aa4.8□□□□□ -1.64
CDKL5-208ENST00000624953 CEP162Q5TB80 1403 aa4.8□□□□□ -1.64
CDKL5-208ENST00000624953 TMEM131LA2VDJ0 1609 aa4.79□□□□□ -1.64
CDKL5-208ENST00000624953 A0A1W2PQU0 124 aa4.79□□□□□ -1.64
CDKL5-208ENST00000624953 WTIPA6NIX2 430 aaPredicted RBP4.79□□□□□ -1.64
CDKL5-208ENST00000624953 DBX1A6NMT0 343 aa4.79□□□□□ -1.64
CDKL5-208ENST00000624953 SRGAP3O43295 1099 aa4.79□□□□□ -1.64
CDKL5-208ENST00000624953 PEX10O60683 326 aa4.79□□□□□ -1.64
CDKL5-208ENST00000624953 VAMP4O75379 141 aa4.79□□□□□ -1.64
CDKL5-208ENST00000624953 CD3EP07766 207 aa4.79□□□□□ -1.64
CDKL5-208ENST00000624953 GSTM1P09488 218 aa4.79□□□□□ -1.64
CDKL5-208ENST00000624953 MSL3P1P0C860 447 aa4.79□□□□□ -1.64
CDKL5-208ENST00000624953 MED14OSP0DP75 135 aa4.79□□□□□ -1.64
CDKL5-208ENST00000624953 FBLN1P23142 703 aa4.79□□□□□ -1.64
CDKL5-208ENST00000624953 RTP1P59025 263 aa4.79□□□□□ -1.64
CDKL5-208ENST00000624953 AMPD2Q01433 879 aa4.79□□□□□ -1.64
CDKL5-208ENST00000624953 RASA3Q14644 834 aa4.79□□□□□ -1.64
CDKL5-208ENST00000624953 SLC35F1Q5T1Q4 408 aa4.79□□□□□ -1.64
CDKL5-208ENST00000624953 ACBD5Q5T8D3 534 aaPredicted RBP4.79□□□□□ -1.64
CDKL5-208ENST00000624953 LARP1BQ659C4 914 aaKnown RBP4.79□□□□□ -1.64
CDKL5-208ENST00000624953 CWF19L1Q69YN2 538 aaKnown RBP4.79□□□□□ -1.64
CDKL5-208ENST00000624953 DENND5AQ6IQ26 1287 aa4.79□□□□□ -1.64
CDKL5-208ENST00000624953 GALNT18Q6P9A2 607 aa4.79□□□□□ -1.64
CDKL5-208ENST00000624953 PRR23BQ6ZRT6 265 aa4.79□□□□□ -1.64
CDKL5-208ENST00000624953 CEP128Q6ZU80 1094 aa4.79□□□□□ -1.64
CDKL5-208ENST00000624953 THEMISQ8N1K5 641 aaPredicted RBP4.79□□□□□ -1.64
CDKL5-208ENST00000624953 FRS2Q8WU20 508 aa4.79□□□□□ -1.64
CDKL5-208ENST00000624953 MTA3Q9BTC8 594 aa4.79□□□□□ -1.64
CDKL5-208ENST00000624953 LGR4Q9BXB1 951 aa4.79□□□□□ -1.64
CDKL5-208ENST00000624953 TANGO6Q9C0B7 1094 aa4.79□□□□□ -1.64
CDKL5-208ENST00000624953 SLC6A17Q9H1V8 727 aa4.79□□□□□ -1.64
CDKL5-208ENST00000624953 CFDP1Q9UEE9 299 aaPredicted RBP4.79□□□□□ -1.64
CDKL5-208ENST00000624953 NPFFR2Q9Y5X5 522 aa4.79□□□□□ -1.64
CDKL5-208ENST00000624953 LRRC9Q6ZRR7 1453 aa4.79□□□□□ -1.64
CDKL5-208ENST00000624953 NRXN3Q9Y4C0 1643 aa4.79□□□□□ -1.64
CDKL5-208ENST00000624953 TMEM94Q12767 1356 aa4.78□□□□□ -1.64
CDKL5-208ENST00000624953 SETBP1Q9Y6X0 1596 aa4.78□□□□□ -1.64
CDKL5-208ENST00000624953 ADGRB3O60242 1522 aa4.78□□□□□ -1.64
CDKL5-208ENST00000624953 EFCAB6Q5THR3 1501 aa4.78□□□□□ -1.64
CDKL5-208ENST00000624953 XRN1Q8IZH2 1706 aaKnown RBP4.78□□□□□ -1.64
CDKL5-208ENST00000624953 NKTRP30414 1462 aaKnown RBP4.78□□□□□ -1.64
CDKL5-208ENST00000624953 MYOCOSA0A1B0GUC4 107 aa4.78□□□□□ -1.64
CDKL5-208ENST00000624953 C2orf71A6NGG8 1288 aa4.78□□□□□ -1.64
CDKL5-208ENST00000624953 ADCY3O60266 1144 aa4.78□□□□□ -1.64
CDKL5-208ENST00000624953 PPP1R11O60927 126 aaPredicted RBP4.78□□□□□ -1.64
CDKL5-208ENST00000624953 GFRA1P56159 465 aa4.78□□□□□ -1.64
CDKL5-208ENST00000624953 LAPTM5Q13571 262 aa4.78□□□□□ -1.64
CDKL5-208ENST00000624953 RASGRF1Q13972 1273 aa4.78□□□□□ -1.64
CDKL5-208ENST00000624953 PPP2R5DQ14738 602 aa4.78□□□□□ -1.64
CDKL5-208ENST00000624953 HLA-DQA1Q5Y7H0 255 aa4.78□□□□□ -1.64
CDKL5-208ENST00000624953 MBLAC2Q68D91 279 aa4.78□□□□□ -1.64
CDKL5-208ENST00000624953 POMZP3Q6PJE2 187 aa4.78□□□□□ -1.64
CDKL5-208ENST00000624953 EEPD1Q7L9B9 569 aa4.78□□□□□ -1.64
CDKL5-208ENST00000624953 CRACR2BQ8N4Y2 399 aaPredicted RBP4.78□□□□□ -1.64
CDKL5-208ENST00000624953 MKL1Q969V6 931 aa4.78□□□□□ -1.64
CDKL5-208ENST00000624953 CDADC1Q9BWV3 514 aa4.78□□□□□ -1.64
CDKL5-208ENST00000624953 KRTAP4-11Q9BYQ6 195 aa4.78□□□□□ -1.64
CDKL5-208ENST00000624953 FBLN5Q9UBX5 448 aa4.78□□□□□ -1.64
CDKL5-208ENST00000624953 ZMYM5Q9UJ78 669 aa4.78□□□□□ -1.64
CDKL5-208ENST00000624953 WASHC2CQ9Y4E1 1318 aa4.77□□□□□ -1.65
CDKL5-208ENST00000624953 E9PCH4 1651 aa4.77□□□□□ -1.65
CDKL5-208ENST00000624953 LAMC1P11047 1609 aa4.77□□□□□ -1.65
CDKL5-208ENST00000624953 SSU72P8A0A1W2PR75 194 aa4.77□□□□□ -1.65
CDKL5-208ENST00000624953 STXBP3O00186 592 aa4.77□□□□□ -1.65
CDKL5-208ENST00000624953 DDAH1O94760 285 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms