RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 FGRP09769 529 aa15.59■□□□□ 0.09
LDB3-209ENST00000623056 ELF1P32519 619 aa15.59■□□□□ 0.09
LDB3-209ENST00000623056 HSPA9P38646 679 aaKnown RBP15.59■□□□□ 0.09
LDB3-209ENST00000623056 WLSQ5T9L3 541 aa15.59■□□□□ 0.09
LDB3-209ENST00000623056 CCDC121Q6ZUS5 278 aa15.59■□□□□ 0.09
LDB3-209ENST00000623056 BAP1Q92560 729 aa15.59■□□□□ 0.09
LDB3-209ENST00000623056 CUEDC2Q9H467 287 aa15.59■□□□□ 0.09
LDB3-209ENST00000623056 COL16A1Q07092 1604 aaPredicted RBP15.58■□□□□ 0.09
LDB3-209ENST00000623056 FLT1P17948 1338 aa15.58■□□□□ 0.09
LDB3-209ENST00000623056 CCDC194A0A1B0GVG4 234 aa15.58■□□□□ 0.08
LDB3-209ENST00000623056 STARD3NLO95772 234 aa15.58■□□□□ 0.08
LDB3-209ENST00000623056 CDR1P51861 262 aa15.58■□□□□ 0.08
LDB3-209ENST00000623056 DYNLL1P63167 89 aaKnown RBP15.58■□□□□ 0.08
LDB3-209ENST00000623056 HPS3Q969F9 1004 aa15.58■□□□□ 0.08
LDB3-209ENST00000623056 CCDC114Q96M63 670 aa15.58■□□□□ 0.08
LDB3-209ENST00000623056 ACTR5Q9H9F9 607 aaPredicted RBP15.58■□□□□ 0.08
LDB3-209ENST00000623056 MAGEF1Q9HAY2 307 aa15.58■□□□□ 0.08
LDB3-209ENST00000623056 ABCF2Q9UG63 623 aa15.58■□□□□ 0.08
LDB3-209ENST00000623056 PPP1R2P41236 205 aa15.57■□□□□ 0.08
LDB3-209ENST00000623056 EVX2Q03828 476 aa15.57■□□□□ 0.08
LDB3-209ENST00000623056 CDC37Q16543 378 aaPredicted RBP15.57■□□□□ 0.08
LDB3-209ENST00000623056 PDXDC1Q6P996 788 aa15.57■□□□□ 0.08
LDB3-209ENST00000623056 CCDC84Q86UT8 332 aaPredicted RBP15.57■□□□□ 0.08
LDB3-209ENST00000623056 CABP7Q86V35 215 aa15.57■□□□□ 0.08
LDB3-209ENST00000623056 KIAA0895Q8NCT3 520 aa15.57■□□□□ 0.08
LDB3-209ENST00000623056 BANK1Q8NDB2 785 aa15.57■□□□□ 0.08
LDB3-209ENST00000623056 C7orf25Q9BPX7 421 aa15.57■□□□□ 0.08
LDB3-209ENST00000623056 BRIP1Q9BX63 1249 aa15.57■□□□□ 0.08
LDB3-209ENST00000623056 TMOD3Q9NYL9 352 aa15.57■□□□□ 0.08
LDB3-209ENST00000623056 TOGARAM1Q9Y4F4 1720 aa15.57■□□□□ 0.08
LDB3-209ENST00000623056 GRID2IPA4D2P6 1211 aa15.57■□□□□ 0.08
LDB3-209ENST00000623056 GOLGA6L10A6NI86 522 aa15.57■□□□□ 0.08
LDB3-209ENST00000623056 PALMO75781 387 aa15.57■□□□□ 0.08
LDB3-209ENST00000623056 FTCDO95954 541 aa15.57■□□□□ 0.08
LDB3-209ENST00000623056 PCP11498 1178 aaKnown RBP15.57■□□□□ 0.08
LDB3-209ENST00000623056 NF2P35240 595 aa15.57■□□□□ 0.08
LDB3-209ENST00000623056 ATP2B2Q01814 1243 aa15.57■□□□□ 0.08
LDB3-209ENST00000623056 MAN2A1Q16706 1144 aa15.57■□□□□ 0.08
LDB3-209ENST00000623056 INF2Q27J81 1249 aa15.57■□□□□ 0.08
LDB3-209ENST00000623056 ILDR2Q71H61 639 aa15.57■□□□□ 0.08
LDB3-209ENST00000623056 ARFGAP2Q8N6H7 521 aa15.57■□□□□ 0.08
LDB3-209ENST00000623056 N4BP2L2Q92802 583 aaPredicted RBP15.57■□□□□ 0.08
LDB3-209ENST00000623056 PLCB1Q9NQ66 1216 aa15.57■□□□□ 0.08
LDB3-209ENST00000623056 DDX20Q9UHI6 824 aaKnown RBP15.57■□□□□ 0.08
LDB3-209ENST00000623056 ASAP1Q9ULH1 1129 aa15.57■□□□□ 0.08
LDB3-209ENST00000623056 ANKRD36CQ5JPF3 1778 aa15.57■□□□□ 0.08
LDB3-209ENST00000623056 GOLGA6L7A0A1B0GV03 622 aa15.56■□□□□ 0.08
LDB3-209ENST00000623056 GMNCA6NCL1 334 aa15.56■□□□□ 0.08
LDB3-209ENST00000623056 M0R2N6 131 aa15.56■□□□□ 0.08
LDB3-209ENST00000623056 RAD51CO43502 376 aa15.56■□□□□ 0.08
LDB3-209ENST00000623056 PPARDQ03181 441 aa15.56■□□□□ 0.08
LDB3-209ENST00000623056 SNCBQ16143 134 aa15.56■□□□□ 0.08
LDB3-209ENST00000623056 SPRED3Q2MJR0 410 aa15.56■□□□□ 0.08
LDB3-209ENST00000623056 FAM47AQ5JRC9 791 aa15.56■□□□□ 0.08
LDB3-209ENST00000623056 HGSNATQ68CP4 663 aa15.56■□□□□ 0.08
LDB3-209ENST00000623056 CENPPQ6IPU0 288 aa15.56■□□□□ 0.08
LDB3-209ENST00000623056 CYB5D1Q6P9G0 228 aa15.56■□□□□ 0.08
LDB3-209ENST00000623056 OSBPL7Q9BZF2 842 aa15.56■□□□□ 0.08
LDB3-209ENST00000623056 PCDHA6Q9UN73 950 aa15.56■□□□□ 0.08
LDB3-209ENST00000623056 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.56■□□□□ 0.08
LDB3-209ENST00000623056 PCDHA8Q9Y5H6 950 aa15.56■□□□□ 0.08
LDB3-209ENST00000623056 CICQ96RK0 1608 aaPredicted RBP15.56■□□□□ 0.08
LDB3-209ENST00000623056 SSU72P8A0A1W2PR75 194 aa15.56■□□□□ 0.08
LDB3-209ENST00000623056 GCOM1H8Y6P7 765 aaPredicted RBP15.56■□□□□ 0.08
LDB3-209ENST00000623056 RBAK-RBAKDNI3L0D1 243 aa15.56■□□□□ 0.08
LDB3-209ENST00000623056 MYZAPP0CAP1 466 aa15.56■□□□□ 0.08
LDB3-209ENST00000623056 RNASE9P60153 205 aaKnown RBP15.56■□□□□ 0.08
LDB3-209ENST00000623056 TXNRD1Q16881 649 aa15.56■□□□□ 0.08
LDB3-209ENST00000623056 TDRD12Q587J7 1177 aaKnown RBP15.56■□□□□ 0.08
LDB3-209ENST00000623056 CNNM4Q6P4Q7 775 aa15.56■□□□□ 0.08
LDB3-209ENST00000623056 LRIG3Q6UXM1 1119 aa15.56■□□□□ 0.08
LDB3-209ENST00000623056 PARP9Q8IXQ6 854 aa15.56■□□□□ 0.08
LDB3-209ENST00000623056 INPP4AQ96PE3 977 aaPredicted RBP15.56■□□□□ 0.08
LDB3-209ENST00000623056 SLC39A2Q9NP94 309 aa15.56■□□□□ 0.08
LDB3-209ENST00000623056 SH3GLB2Q9NR46 395 aa15.56■□□□□ 0.08
LDB3-209ENST00000623056 SLC12A6Q9UHW9 1150 aa15.56■□□□□ 0.08
LDB3-209ENST00000623056 ODF2LQ9ULJ1 636 aa15.56■□□□□ 0.08
LDB3-209ENST00000623056 COL14A1Q05707 1796 aaKnown RBP15.56■□□□□ 0.08
LDB3-209ENST00000623056 RREB1Q92766 1687 aa15.55■□□□□ 0.08
LDB3-209ENST00000623056 DNM1LO00429 736 aa15.55■□□□□ 0.08
LDB3-209ENST00000623056 MYBP10242 640 aa15.55■□□□□ 0.08
LDB3-209ENST00000623056 PDHBP11177 359 aa15.55■□□□□ 0.08
LDB3-209ENST00000623056 SCP2P22307 547 aa15.55■□□□□ 0.08
LDB3-209ENST00000623056 HSD17B3P37058 310 aa15.55■□□□□ 0.08
LDB3-209ENST00000623056 QPCTQ16769 361 aa15.55■□□□□ 0.08
LDB3-209ENST00000623056 COBLL1Q53SF7 1204 aa15.55■□□□□ 0.08
LDB3-209ENST00000623056 FUKQ8N0W3 1084 aa15.55■□□□□ 0.08
LDB3-209ENST00000623056 C3orf20Q8ND61 904 aa15.55■□□□□ 0.08
LDB3-209ENST00000623056 TAF1DQ9H5J8 278 aaPredicted RBP15.55■□□□□ 0.08
LDB3-209ENST00000623056 MYH1P12882 1939 aa15.55■□□□□ 0.08
LDB3-209ENST00000623056 USP17L12C9JPN9 530 aa15.55■□□□□ 0.08
LDB3-209ENST00000623056 USP17L21D6R901 530 aa15.55■□□□□ 0.08
LDB3-209ENST00000623056 TRAPPC3O43617 180 aa15.55■□□□□ 0.08
LDB3-209ENST00000623056 IBSPP21815 317 aaPredicted RBP15.55■□□□□ 0.08
LDB3-209ENST00000623056 PRPHP41219 470 aa15.55■□□□□ 0.08
LDB3-209ENST00000623056 ANKRD20A8PQ5CZ79 823 aa15.55■□□□□ 0.08
LDB3-209ENST00000623056 CACNA2D4Q7Z3S7 1137 aa15.55■□□□□ 0.08
LDB3-209ENST00000623056 FAM228AQ86W67 206 aa15.55■□□□□ 0.08
LDB3-209ENST00000623056 KLHL7Q8IXQ5 586 aa15.55■□□□□ 0.08
LDB3-209ENST00000623056 OR2W6PQ8NHA6 318 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms