RNA–Protein interactions for RNA: ENST00000622960.1

ATRX-208, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-208ENST00000622960 DNAH12Q6ZR08 3092 aa15.08■□□□□ 0
ATRX-208ENST00000622960 STAM2O75886 525 aa15.08■□□□□ 0
ATRX-208ENST00000622960 MMP3P08254 477 aa15.08■□□□□ 0
ATRX-208ENST00000622960 HMGB1P09429 215 aaKnown RBP15.08■□□□□ 0
ATRX-208ENST00000622960 CSF2RAP15509 400 aa15.08■□□□□ 0
ATRX-208ENST00000622960 LAMC2Q13753 1193 aa15.08■□□□□ 0
ATRX-208ENST00000622960 PGM5Q15124 567 aa15.08■□□□□ 0
ATRX-208ENST00000622960 Q7L0L9 218 aa15.08■□□□□ 0
ATRX-208ENST00000622960 MICU3Q86XE3 530 aa15.08■□□□□ 0
ATRX-208ENST00000622960 RPUSD2Q8IZ73 545 aaKnown RBP15.08■□□□□ 0
ATRX-208ENST00000622960 AFG1LQ8WV93 481 aa15.08■□□□□ 0
ATRX-208ENST00000622960 TRPV6Q9H1D0 765 aa15.08■□□□□ 0
ATRX-208ENST00000622960 OPLAHO14841 1288 aa15.07■□□□□ 0
ATRX-208ENST00000622960 CYTH3O43739 400 aa15.07■□□□□ 0
ATRX-208ENST00000622960 ARIH2O95376 493 aa15.07■□□□□ 0
ATRX-208ENST00000622960 CYP2C18P33260 490 aa15.07■□□□□ 0
ATRX-208ENST00000622960 NBPF20Q3BBV1 942 aa15.07■□□□□ 0
ATRX-208ENST00000622960 CCDC62Q6P9F0 684 aa15.07■□□□□ 0
ATRX-208ENST00000622960 RETREG2Q8NC44 543 aa15.07■□□□□ 0
ATRX-208ENST00000622960 NOC4LQ9BVI4 516 aaKnown RBP15.07■□□□□ 0
ATRX-208ENST00000622960 EHMT1Q9H9B1 1298 aa15.07■□□□□ 0
ATRX-208ENST00000622960 IL23AQ9NPF7 189 aa15.07■□□□□ 0
ATRX-208ENST00000622960 RBM28Q9NW13 759 aaKnown RBP15.07■□□□□ 0
ATRX-208ENST00000622960 TMEM265A0A087WTH1 108 aa15.06■□□□□ 0
ATRX-208ENST00000622960 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.06■□□□□ 0
ATRX-208ENST00000622960 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.06■□□□□ 0
ATRX-208ENST00000622960 REC8O95072 547 aa15.06■□□□□ 0
ATRX-208ENST00000622960 TGFB3P10600 412 aa15.06■□□□□ 0
ATRX-208ENST00000622960 CCL23P55773 120 aa15.06■□□□□ 0
ATRX-208ENST00000622960 ARHGAP1Q07960 439 aa15.06■□□□□ 0
ATRX-208ENST00000622960 BFSP2Q13515 415 aa15.06■□□□□ 0
ATRX-208ENST00000622960 SKAP1Q86WV1 359 aa15.06■□□□□ 0
ATRX-208ENST00000622960 PPTC7Q8NI37 304 aa15.06■□□□□ 0
ATRX-208ENST00000622960 EMID1Q96A84 441 aaPredicted RBP15.06■□□□□ 0
ATRX-208ENST00000622960 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.06■□□□□ 0
ATRX-208ENST00000622960 LRRC2Q9BYS8 371 aa15.06■□□□□ 0
ATRX-208ENST00000622960 MLXIPQ9HAP2 919 aa15.06■□□□□ 0
ATRX-208ENST00000622960 MTMR10Q9NXD2 777 aa15.06■□□□□ 0
ATRX-208ENST00000622960 DDX41Q9UJV9 622 aaKnown RBP15.06■□□□□ 0
ATRX-208ENST00000622960 NAP1L2Q9ULW6 460 aaPredicted RBP15.06■□□□□ 0
ATRX-208ENST00000622960 GRIN2DO15399 1336 aa15.06■□□□□ 0
ATRX-208ENST00000622960 NOP56O00567 594 aaKnown RBP15.05■□□□□ -0
ATRX-208ENST00000622960 ZBTB43O43298 467 aa15.05■□□□□ -0
ATRX-208ENST00000622960 PLEKHA8P1O95397 391 aa15.05■□□□□ -0
ATRX-208ENST00000622960 FGBP02675 491 aa15.05■□□□□ -0
ATRX-208ENST00000622960 PFKMP08237 780 aa15.05■□□□□ -0
ATRX-208ENST00000622960 ACTN1P12814 892 aa15.05■□□□□ -0
ATRX-208ENST00000622960 RXRAP19793 462 aa15.05■□□□□ -0
ATRX-208ENST00000622960 EPHB4P54760 987 aa15.05■□□□□ -0
ATRX-208ENST00000622960 DHX32Q7L7V1 743 aaKnown RBP15.05■□□□□ -0
ATRX-208ENST00000622960 VSIG10LQ86VR7 867 aa15.05■□□□□ -0
ATRX-208ENST00000622960 SGMS1Q86VZ5 419 aa15.05■□□□□ -0
ATRX-208ENST00000622960 C7orf31Q8N865 590 aa15.05■□□□□ -0
ATRX-208ENST00000622960 FANCBQ8NB91 859 aa15.05■□□□□ -0
ATRX-208ENST00000622960 FAM161BQ96MY7 647 aa15.05■□□□□ -0
ATRX-208ENST00000622960 SPATA33Q96N06 139 aa15.05■□□□□ -0
ATRX-208ENST00000622960 TRMT13Q9NUP7 481 aaKnown RBP15.05■□□□□ -0
ATRX-208ENST00000622960 STXBP5LQ9Y2K9 1186 aa15.05■□□□□ -0
ATRX-208ENST00000622960 SPDYE3A6NKU9 549 aa15.04■□□□□ -0
ATRX-208ENST00000622960 GGPS1O95749 300 aa15.04■□□□□ -0
ATRX-208ENST00000622960 ACRP10323 421 aa15.04■□□□□ -0
ATRX-208ENST00000622960 RFC2P35250 354 aa15.04■□□□□ -0
ATRX-208ENST00000622960 SLC35G1Q2M3R5 365 aa15.04■□□□□ -0
ATRX-208ENST00000622960 XRRA1Q6P2D8 792 aa15.04■□□□□ -0
ATRX-208ENST00000622960 APOA5Q6Q788 366 aa15.04■□□□□ -0
ATRX-208ENST00000622960 TMTC3Q6ZXV5 915 aa15.04■□□□□ -0
ATRX-208ENST00000622960 ZNF365Q70YC5 407 aa15.04■□□□□ -0
ATRX-208ENST00000622960 HEATR3Q7Z4Q2 680 aa15.04■□□□□ -0
ATRX-208ENST00000622960 NLRX1Q86UT6 975 aa15.04■□□□□ -0
ATRX-208ENST00000622960 RAB11FIP4Q86YS3 637 aa15.04■□□□□ -0
ATRX-208ENST00000622960 CCDC82Q8N4S0 544 aa15.04■□□□□ -0
ATRX-208ENST00000622960 SRBD1Q8N5C6 995 aaKnown RBP15.04■□□□□ -0
ATRX-208ENST00000622960 PSTPIP2Q9H939 334 aa15.04■□□□□ -0
ATRX-208ENST00000622960 GOLGA8AA7E2F4 631 aa15.03■□□□□ -0
ATRX-208ENST00000622960 GOLGA8BA8MQT2 603 aa15.03■□□□□ -0
ATRX-208ENST00000622960 ZBBXA8MT70 800 aa15.03■□□□□ -0
ATRX-208ENST00000622960 PITPNM1O00562 1244 aa15.03■□□□□ -0
ATRX-208ENST00000622960 FIBPO43427 364 aa15.03■□□□□ -0
ATRX-208ENST00000622960 CYP2C9P11712 490 aa15.03■□□□□ -0
ATRX-208ENST00000622960 NEDD9Q14511 834 aa15.03■□□□□ -0
ATRX-208ENST00000622960 PTGISQ16647 500 aa15.03■□□□□ -0
ATRX-208ENST00000622960 RTN1Q16799 776 aa15.03■□□□□ -0
ATRX-208ENST00000622960 TMEM240Q5SV17 173 aa15.03■□□□□ -0
ATRX-208ENST00000622960 CELF3Q5SZQ8 465 aaKnown RBP15.03■□□□□ -0
ATRX-208ENST00000622960 CMTR1Q8N1G2 835 aaKnown RBP15.03■□□□□ -0
ATRX-208ENST00000622960 CAGE1Q8TC20 777 aa15.03■□□□□ -0
ATRX-208ENST00000622960 CDHR1Q96JP9 859 aa15.03■□□□□ -0
ATRX-208ENST00000622960 MSRAQ9UJ68 235 aa15.03■□□□□ -0
ATRX-208ENST00000622960 SCN10AQ9Y5Y9 1956 aa15.03■□□□□ -0
ATRX-208ENST00000622960 FRMPD4Q14CM0 1322 aa15.02■□□□□ -0
ATRX-208ENST00000622960 UMODL1Q5DID0 1318 aa15.02■□□□□ -0
ATRX-208ENST00000622960 KLF18A0A0U1RQI7 1052 aa15.02■□□□□ -0
ATRX-208ENST00000622960 CCDC196A0A1B0GTZ2 297 aa15.02■□□□□ -0
ATRX-208ENST00000622960 hCG_1984214I3L0E3 225 aa15.02■□□□□ -0
ATRX-208ENST00000622960 PIK3CDO00329 1044 aa15.02■□□□□ -0
ATRX-208ENST00000622960 ZNF286BP0CG31 522 aa15.02■□□□□ -0
ATRX-208ENST00000622960 UBA1P22314 1058 aaKnown RBP15.02■□□□□ -0
ATRX-208ENST00000622960 DNAJB2P25686 324 aa15.02■□□□□ -0
ATRX-208ENST00000622960 PSEN2P49810 448 aa15.02■□□□□ -0
ATRX-208ENST00000622960 MFSD10Q14728 455 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms