RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 HTRA3P83110 453 aa7□□□□□ -1.29
BRCA1-229ENST00000621897 YOD1Q5VVQ6 348 aaPredicted RBP7□□□□□ -1.29
BRCA1-229ENST00000621897 RIOX2Q8IUF8 465 aa7□□□□□ -1.29
BRCA1-229ENST00000621897 ADGRG2Q8IZP9 1017 aa7□□□□□ -1.29
BRCA1-229ENST00000621897 ST13P5Q8NFI4 369 aaPredicted RBP7□□□□□ -1.29
BRCA1-229ENST00000621897 SMARCC2Q8TAQ2 1214 aa7□□□□□ -1.29
BRCA1-229ENST00000621897 KCTD13Q8WZ19 329 aa7□□□□□ -1.29
BRCA1-229ENST00000621897 TRMT2BQ96GJ1 504 aaKnown RBP7□□□□□ -1.29
BRCA1-229ENST00000621897 SGSM3Q96HU1 749 aa7□□□□□ -1.29
BRCA1-229ENST00000621897 C8orf37Q96NL8 207 aa7□□□□□ -1.29
BRCA1-229ENST00000621897 AARSD1Q9BTE6 412 aaKnown RBP7□□□□□ -1.29
BRCA1-229ENST00000621897 NPFFR2Q9Y5X5 522 aa7□□□□□ -1.29
BRCA1-229ENST00000621897 PMF1-BGLAPU3KQ54 211 aa7□□□□□ -1.29
BRCA1-229ENST00000621897 A0A1B0GTL3 188 aa6.99□□□□□ -1.29
BRCA1-229ENST00000621897 MSCO60682 206 aa6.99□□□□□ -1.29
BRCA1-229ENST00000621897 ATP2B1P20020 1258 aa6.99□□□□□ -1.29
BRCA1-229ENST00000621897 SLC6A11P48066 632 aa6.99□□□□□ -1.29
BRCA1-229ENST00000621897 CACNB2Q08289 660 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-229ENST00000621897 LSAMPQ13449 338 aa6.99□□□□□ -1.29
BRCA1-229ENST00000621897 HSP90AA2PQ14568 343 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-229ENST00000621897 SPATC1Q76KD6 591 aa6.99□□□□□ -1.29
BRCA1-229ENST00000621897 LINC01356Q8N9X3 169 aa6.99□□□□□ -1.29
BRCA1-229ENST00000621897 SYT8Q8NBV8 401 aa6.99□□□□□ -1.29
BRCA1-229ENST00000621897 CPA5Q8WXQ8 436 aa6.99□□□□□ -1.29
BRCA1-229ENST00000621897 OSBP2Q969R2 916 aa6.99□□□□□ -1.29
BRCA1-229ENST00000621897 TMEM169Q96HH4 297 aa6.99□□□□□ -1.29
BRCA1-229ENST00000621897 CHAMP1Q96JM3 812 aa6.99□□□□□ -1.29
BRCA1-229ENST00000621897 C20orf173Q96LM9 149 aa6.99□□□□□ -1.29
BRCA1-229ENST00000621897 ZCCHC4Q9H5U6 513 aa6.99□□□□□ -1.29
BRCA1-229ENST00000621897 PALD1Q9ULE6 856 aa6.99□□□□□ -1.29
BRCA1-229ENST00000621897 PRODHO43272 600 aa6.98□□□□□ -1.29
BRCA1-229ENST00000621897 C8BP07358 591 aa6.98□□□□□ -1.29
BRCA1-229ENST00000621897 GTF2A2P52657 109 aa6.98□□□□□ -1.29
BRCA1-229ENST00000621897 CAP1Q01518 475 aa6.98□□□□□ -1.29
BRCA1-229ENST00000621897 DLX2Q07687 328 aaPredicted RBP6.98□□□□□ -1.29
BRCA1-229ENST00000621897 NTRK3Q16288 839 aa6.98□□□□□ -1.29
BRCA1-229ENST00000621897 MROH9Q5TGP6 573 aa6.98□□□□□ -1.29
BRCA1-229ENST00000621897 USP53Q70EK8 1073 aa6.98□□□□□ -1.29
BRCA1-229ENST00000621897 FAM26EQ8N5C1 309 aa6.98□□□□□ -1.29
BRCA1-229ENST00000621897 ZNF526Q8TF50 670 aaPredicted RBP6.98□□□□□ -1.29
BRCA1-229ENST00000621897 SEC14L1Q92503 715 aa6.98□□□□□ -1.29
BRCA1-229ENST00000621897 AP5M1Q9H0R1 490 aa6.98□□□□□ -1.29
BRCA1-229ENST00000621897 CDIP1Q9H305 208 aa6.98□□□□□ -1.29
BRCA1-229ENST00000621897 CLDND1Q9NY35 253 aa6.98□□□□□ -1.29
BRCA1-229ENST00000621897 PPARGC1AQ9UBK2 798 aaKnown RBP6.98□□□□□ -1.29
BRCA1-229ENST00000621897 A0A0G2JLL6 359 aaPredicted RBP6.97□□□□□ -1.29
BRCA1-229ENST00000621897 IQCA1LA6NCM1 817 aa6.97□□□□□ -1.29
BRCA1-229ENST00000621897 H7BY64 318 aa6.97□□□□□ -1.29
BRCA1-229ENST00000621897 GTF2F1P35269 517 aaKnown RBP eCLIP6.97□□□□□ -1.29
BRCA1-229ENST00000621897 KCNT2Q6UVM3 1135 aa6.97□□□□□ -1.29
BRCA1-229ENST00000621897 MILR1Q7Z6M3 343 aa6.97□□□□□ -1.29
BRCA1-229ENST00000621897 MIB1Q86YT6 1006 aa6.97□□□□□ -1.29
BRCA1-229ENST00000621897 NLGN1Q8N2Q7 840 aa6.97□□□□□ -1.29
BRCA1-229ENST00000621897 FEZF2Q8TBJ5 459 aa6.97□□□□□ -1.29
BRCA1-229ENST00000621897 DDX11Q96FC9 970 aa6.97□□□□□ -1.29
BRCA1-229ENST00000621897 PHF20Q9BVI0 1012 aa6.97□□□□□ -1.29
BRCA1-229ENST00000621897 XYLT2Q9H1B5 865 aa6.97□□□□□ -1.29
BRCA1-229ENST00000621897 BLACEA4D250 179 aa6.96□□□□□ -1.3
BRCA1-229ENST00000621897 OTOL1A6NHN0 477 aaPredicted RBP6.96□□□□□ -1.3
BRCA1-229ENST00000621897 CCDC85CA6NKD9 419 aa6.96□□□□□ -1.3
BRCA1-229ENST00000621897 PDPK1O15530 556 aa6.96□□□□□ -1.3
BRCA1-229ENST00000621897 FGFR1P11362 822 aa6.96□□□□□ -1.3
BRCA1-229ENST00000621897 PABPC1P11940 636 aaKnown RBP6.96□□□□□ -1.3
BRCA1-229ENST00000621897 RBM10P98175 930 aaKnown RBP6.96□□□□□ -1.3
BRCA1-229ENST00000621897 ETV3LQ6ZN32 361 aa6.96□□□□□ -1.3
BRCA1-229ENST00000621897 SAPCD2Q86UD0 394 aa6.96□□□□□ -1.3
BRCA1-229ENST00000621897 GPR27Q9NS67 375 aa6.96□□□□□ -1.3
BRCA1-229ENST00000621897 PPP1R1BQ9UD71 204 aaPredicted RBP6.96□□□□□ -1.3
BRCA1-229ENST00000621897 RAPGEFL1Q9UHV5 662 aa6.96□□□□□ -1.3
BRCA1-229ENST00000621897 COA3Q9Y2R0 106 aaPredicted RBP6.96□□□□□ -1.3
BRCA1-229ENST00000621897 TRAV20A0A0B4J274 112 aa6.95□□□□□ -1.3
BRCA1-229ENST00000621897 U2SURPO15042 1029 aaKnown RBP6.95□□□□□ -1.3
BRCA1-229ENST00000621897 RASGRF1Q13972 1273 aa6.95□□□□□ -1.3
BRCA1-229ENST00000621897 LILRA6Q6PI73 481 aa6.95□□□□□ -1.3
BRCA1-229ENST00000621897 NSMFQ6X4W1 530 aa6.95□□□□□ -1.3
BRCA1-229ENST00000621897 GORASP1Q9BQQ3 440 aa6.95□□□□□ -1.3
BRCA1-229ENST00000621897 SPATA6Q9NWH7 488 aaPredicted RBP6.95□□□□□ -1.3
BRCA1-229ENST00000621897 PFDN2Q9UHV9 154 aa6.95□□□□□ -1.3
BRCA1-229ENST00000621897 ADCY3O60266 1144 aa6.94□□□□□ -1.3
BRCA1-229ENST00000621897 CYP2C8P10632 490 aa6.94□□□□□ -1.3
BRCA1-229ENST00000621897 STAT5AP42229 794 aa6.94□□□□□ -1.3
BRCA1-229ENST00000621897 SLURP1P55000 103 aa6.94□□□□□ -1.3
BRCA1-229ENST00000621897 SMAD4Q13485 552 aaKnown RBP6.94□□□□□ -1.3
BRCA1-229ENST00000621897 SERINC3Q13530 473 aa6.94□□□□□ -1.3
BRCA1-229ENST00000621897 NBPF6Q5VWK0 638 aa6.94□□□□□ -1.3
BRCA1-229ENST00000621897 LIPIQ6XZB0 460 aa6.94□□□□□ -1.3
BRCA1-229ENST00000621897 STK32CQ86UX6 486 aa6.94□□□□□ -1.3
BRCA1-229ENST00000621897 FAM126BQ8IXS8 530 aa6.94□□□□□ -1.3
BRCA1-229ENST00000621897 ZDHHC14Q8IZN3 488 aa6.94□□□□□ -1.3
BRCA1-229ENST00000621897 LRRC47Q8N1G4 583 aaKnown RBP6.94□□□□□ -1.3
BRCA1-229ENST00000621897 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.94□□□□□ -1.3
BRCA1-229ENST00000621897 ZNF669Q96BR6 464 aaPredicted RBP6.94□□□□□ -1.3
BRCA1-229ENST00000621897 NBPF4Q96M43 638 aa6.94□□□□□ -1.3
BRCA1-229ENST00000621897 SPATA9Q9BWV2 254 aa6.94□□□□□ -1.3
BRCA1-229ENST00000621897 JAM3Q9BX67 310 aa6.94□□□□□ -1.3
BRCA1-229ENST00000621897 LUC7LQ9NQ29 371 aaKnown RBP6.94□□□□□ -1.3
BRCA1-229ENST00000621897 ZNF652Q9Y2D9 606 aa6.94□□□□□ -1.3
BRCA1-229ENST00000621897 SH3D21A4FU49 640 aa6.93□□□□□ -1.3
BRCA1-229ENST00000621897 HGSO14964 777 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-229ENST00000621897 DIAPH1O60610 1272 aaKnown RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms