RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 MFSD5Q6N075 450 aa20.76■□□□□ 0.91
SCAMP4-213ENST00000621748 DHX32Q7L7V1 743 aaKnown RBP20.76■□□□□ 0.91
SCAMP4-213ENST00000621748 VSIG10LQ86VR7 867 aa20.76■□□□□ 0.91
SCAMP4-213ENST00000621748 FANCBQ8NB91 859 aa20.76■□□□□ 0.91
SCAMP4-213ENST00000621748 AFG1LQ8WV93 481 aa20.76■□□□□ 0.91
SCAMP4-213ENST00000621748 SEZ6LQ9BYH1 1024 aa20.76■□□□□ 0.91
SCAMP4-213ENST00000621748 PPP1R12CQ9BZL4 782 aa20.76■□□□□ 0.91
SCAMP4-213ENST00000621748 DDX41Q9UJV9 622 aaKnown RBP20.76■□□□□ 0.91
SCAMP4-213ENST00000621748 GH1P01241 217 aa20.75■□□□□ 0.91
SCAMP4-213ENST00000621748 Q7L0L9 218 aa20.75■□□□□ 0.91
SCAMP4-213ENST00000621748 PPP1R13LQ8WUF5 828 aa20.75■□□□□ 0.91
SCAMP4-213ENST00000621748 ZFP91Q96JP5 570 aaPredicted RBP20.75■□□□□ 0.91
SCAMP4-213ENST00000621748 KPNA6O60684 536 aa20.74■□□□□ 0.91
SCAMP4-213ENST00000621748 CYP2C18P33260 490 aa20.74■□□□□ 0.91
SCAMP4-213ENST00000621748 NBPF20Q3BBV1 942 aa20.74■□□□□ 0.91
SCAMP4-213ENST00000621748 MICU3Q86XE3 530 aa20.74■□□□□ 0.91
SCAMP4-213ENST00000621748 CCDC82Q8N4S0 544 aa20.74■□□□□ 0.91
SCAMP4-213ENST00000621748 KCNB2Q92953 911 aa20.74■□□□□ 0.91
SCAMP4-213ENST00000621748 ALDH8A1Q9H2A2 487 aaPredicted RBP20.74■□□□□ 0.91
SCAMP4-213ENST00000621748 SEC63Q9UGP8 760 aaKnown RBP20.74■□□□□ 0.91
SCAMP4-213ENST00000621748 BRPF3Q9ULD4 1205 aa20.74■□□□□ 0.91
SCAMP4-213ENST00000621748 MRVI1Q9Y6F6 885 aa20.74■□□□□ 0.91
SCAMP4-213ENST00000621748 UMODL1Q5DID0 1318 aa20.74■□□□□ 0.91
SCAMP4-213ENST00000621748 hCG_1642624A0A1W2PR95 340 aa20.73■□□□□ 0.91
SCAMP4-213ENST00000621748 MMP3P08254 477 aa20.73■□□□□ 0.91
SCAMP4-213ENST00000621748 CSF2RAP15509 400 aa20.73■□□□□ 0.91
SCAMP4-213ENST00000621748 KRT32Q14532 448 aa20.73■□□□□ 0.91
SCAMP4-213ENST00000621748 APOA5Q6Q788 366 aa20.73■□□□□ 0.91
SCAMP4-213ENST00000621748 TMTC3Q6ZXV5 915 aa20.73■□□□□ 0.91
SCAMP4-213ENST00000621748 C16orf59Q7L2K0 433 aa20.73■□□□□ 0.91
SCAMP4-213ENST00000621748 DEFB123Q8N688 67 aa20.73■□□□□ 0.91
SCAMP4-213ENST00000621748 TRMT13Q9NUP7 481 aaKnown RBP20.73■□□□□ 0.91
SCAMP4-213ENST00000621748 CCND2P30279 289 aa20.72■□□□□ 0.91
SCAMP4-213ENST00000621748 USP17L6PQ6QN14 398 aa20.72■□□□□ 0.91
SCAMP4-213ENST00000621748 SYNE3Q6ZMZ3 975 aa20.72■□□□□ 0.91
SCAMP4-213ENST00000621748 TMEM199Q8N511 208 aa20.72■□□□□ 0.91
SCAMP4-213ENST00000621748 NOC4LQ9BVI4 516 aaKnown RBP20.72■□□□□ 0.91
SCAMP4-213ENST00000621748 HIPK3Q9H422 1215 aa20.72■□□□□ 0.91
SCAMP4-213ENST00000621748 MEIS2O14770 477 aa20.71■□□□□ 0.91
SCAMP4-213ENST00000621748 CPA1P15085 419 aa20.71■□□□□ 0.91
SCAMP4-213ENST00000621748 HSPA4P34932 840 aa20.71■□□□□ 0.91
SCAMP4-213ENST00000621748 SP2Q02086 613 aa20.71■□□□□ 0.91
SCAMP4-213ENST00000621748 PPIGQ13427 754 aaKnown RBP eCLIP20.71■□□□□ 0.915e-11■□□□□ 9.3
SCAMP4-213ENST00000621748 GPKOWQ92917 476 aaPredicted RBP eCLIP20.71■□□□□ 0.91
SCAMP4-213ENST00000621748 EMID1Q96A84 441 aaPredicted RBP20.71■□□□□ 0.91
SCAMP4-213ENST00000621748 RNPC3Q96LT9 517 aaKnown RBP20.71■□□□□ 0.91
SCAMP4-213ENST00000621748 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.71■□□□□ 0.911e-8■□□□□ 8.6
SCAMP4-213ENST00000621748 FRMPD4Q14CM0 1322 aa20.71■□□□□ 0.91
SCAMP4-213ENST00000621748 COL6A3P12111 3177 aa20.71■□□□□ 0.91
SCAMP4-213ENST00000621748 PIK3CDO00329 1044 aa20.7■□□□□ 0.9
SCAMP4-213ENST00000621748 EIF5BO60841 1220 aaKnown RBP20.7■□□□□ 0.9
SCAMP4-213ENST00000621748 ACRP10323 421 aa20.7■□□□□ 0.9
SCAMP4-213ENST00000621748 CYP2C9P11712 490 aa20.7■□□□□ 0.9
SCAMP4-213ENST00000621748 CCL23P55773 120 aa20.7■□□□□ 0.9
SCAMP4-213ENST00000621748 MRPS9P82933 396 aaKnown RBP20.7■□□□□ 0.9
SCAMP4-213ENST00000621748 LAMC2Q13753 1193 aa20.7■□□□□ 0.9
SCAMP4-213ENST00000621748 FAM47CQ5HY64 1035 aa20.7■□□□□ 0.9
SCAMP4-213ENST00000621748 TMEM240Q5SV17 173 aa20.7■□□□□ 0.9
SCAMP4-213ENST00000621748 NFRKBQ6P4R8 1299 aa20.7■□□□□ 0.9
SCAMP4-213ENST00000621748 DHX37Q8IY37 1157 aaKnown RBP20.7■□□□□ 0.9
SCAMP4-213ENST00000621748 KAT2BQ92831 832 aa20.7■□□□□ 0.9
SCAMP4-213ENST00000621748 SNX14Q9Y5W7 946 aa20.7■□□□□ 0.9
SCAMP4-213ENST00000621748 ZBTB43O43298 467 aa20.69■□□□□ 0.9
SCAMP4-213ENST00000621748 SORBS3O60504 671 aa20.69■□□□□ 0.9
SCAMP4-213ENST00000621748 HMGB1P09429 215 aaKnown RBP20.69■□□□□ 0.9
SCAMP4-213ENST00000621748 CASTP20810 708 aaKnown RBP20.69■□□□□ 0.9
SCAMP4-213ENST00000621748 CHMP4BP1P59074 171 aa20.69■□□□□ 0.9
SCAMP4-213ENST00000621748 DGKDQ16760 1214 aa20.69■□□□□ 0.9
SCAMP4-213ENST00000621748 MYSM1Q5VVJ2 828 aa20.69■□□□□ 0.9
SCAMP4-213ENST00000621748 KCNV1Q6PIU1 500 aa20.69■□□□□ 0.9
SCAMP4-213ENST00000621748 SMARCC2Q8TAQ2 1214 aa20.69■□□□□ 0.9
SCAMP4-213ENST00000621748 WNT8AQ9H1J5 351 aa20.69■□□□□ 0.9
SCAMP4-213ENST00000621748 MTMR10Q9NXD2 777 aa20.69■□□□□ 0.9
SCAMP4-213ENST00000621748 KLF18A0A0U1RQI7 1052 aa20.68■□□□□ 0.9
SCAMP4-213ENST00000621748 GGPS1O95749 300 aa20.68■□□□□ 0.9
SCAMP4-213ENST00000621748 SUPT20HL2P0C7V6 817 aa20.68■□□□□ 0.9
SCAMP4-213ENST00000621748 TGFB3P10600 412 aa20.68■□□□□ 0.9
SCAMP4-213ENST00000621748 UBA1P22314 1058 aaKnown RBP20.68■□□□□ 0.9
SCAMP4-213ENST00000621748 FUT2Q10981 343 aa20.68■□□□□ 0.9
SCAMP4-213ENST00000621748 RTN1Q16799 776 aa20.68■□□□□ 0.9
SCAMP4-213ENST00000621748 CELF3Q5SZQ8 465 aaKnown RBP20.68■□□□□ 0.9
SCAMP4-213ENST00000621748 ZNF365Q70YC5 407 aa20.68■□□□□ 0.9
SCAMP4-213ENST00000621748 PPTC7Q8NI37 304 aa20.68■□□□□ 0.9
SCAMP4-213ENST00000621748 CUL5Q93034 780 aa20.68■□□□□ 0.9
SCAMP4-213ENST00000621748 JAKMIP1Q96N16 626 aaKnown RBP20.68■□□□□ 0.9
SCAMP4-213ENST00000621748 BCAS3Q9H6U6 928 aa20.68■□□□□ 0.9
SCAMP4-213ENST00000621748 PSTPIP2Q9H939 334 aa20.68■□□□□ 0.9
SCAMP4-213ENST00000621748 FAM217BQ9NTX9 383 aaPredicted RBP20.68■□□□□ 0.9
SCAMP4-213ENST00000621748 RBM28Q9NW13 759 aaKnown RBP20.68■□□□□ 0.9
SCAMP4-213ENST00000621748 RTEL1Q9NZ71 1219 aa20.68■□□□□ 0.9
SCAMP4-213ENST00000621748 TRIP12Q14669 1992 aaPredicted RBP20.67■□□□□ 0.9
SCAMP4-213ENST00000621748 SMAD3P84022 425 aaKnown RBP20.67■□□□□ 0.9
SCAMP4-213ENST00000621748 PTPN11Q06124 597 aaPredicted RBP20.67■□□□□ 0.9
SCAMP4-213ENST00000621748 HSDL1Q3SXM5 330 aa20.67■□□□□ 0.9
SCAMP4-213ENST00000621748 FAM109BQ6ICB4 259 aaPredicted RBP20.67■□□□□ 0.9
SCAMP4-213ENST00000621748 INPP4AQ96PE3 977 aaPredicted RBP20.67■□□□□ 0.9
SCAMP4-213ENST00000621748 IL23AQ9NPF7 189 aa20.67■□□□□ 0.9
SCAMP4-213ENST00000621748 CNTNAP5Q8WYK1 1306 aa20.67■□□□□ 0.9
SCAMP4-213ENST00000621748 DOCK5Q9H7D0 1870 aa20.67■□□□□ 0.9
SCAMP4-213ENST00000621748 REC8O95072 547 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms