RNA–Protein interactions for RNA: ENST00000621176.1

TRIM6-212, Transcript of tripartite motif containing 6, humanhuman

TSL 5 BASIC

Gene TRIM6, Length 3,005 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-212ENST00000621176 SAMM50Q9Y512 469 aa9.72□□□□□ -0.85
TRIM6-212ENST00000621176 PJA2O43164 708 aa9.71□□□□□ -0.85
TRIM6-212ENST00000621176 OPA1O60313 960 aa9.71□□□□□ -0.85
TRIM6-212ENST00000621176 EPB41P11171 864 aaKnown RBP9.71□□□□□ -0.85
TRIM6-212ENST00000621176 PAFAH1B1P43034 410 aa9.71□□□□□ -0.85
TRIM6-212ENST00000621176 KCNMA1Q12791 1236 aa9.71□□□□□ -0.85
TRIM6-212ENST00000621176 LRRC41Q15345 812 aa9.71□□□□□ -0.85
TRIM6-212ENST00000621176 GBP6Q6ZN66 633 aa9.71□□□□□ -0.85
TRIM6-212ENST00000621176 LRRC55Q6ZSA7 311 aa9.71□□□□□ -0.85
TRIM6-212ENST00000621176 KRT25Q7Z3Z0 450 aa9.71□□□□□ -0.85
TRIM6-212ENST00000621176 CCDC84Q86UT8 332 aaPredicted RBP9.71□□□□□ -0.85
TRIM6-212ENST00000621176 RUBCNQ92622 972 aa9.71□□□□□ -0.85
TRIM6-212ENST00000621176 KAT2BQ92831 832 aa9.71□□□□□ -0.85
TRIM6-212ENST00000621176 CAVIN3Q969G5 261 aa9.71□□□□□ -0.85
TRIM6-212ENST00000621176 IQCDQ96DY2 449 aa9.71□□□□□ -0.85
TRIM6-212ENST00000621176 PNMA5Q96PV4 448 aa9.71□□□□□ -0.85
TRIM6-212ENST00000621176 VAT1LQ9HCJ6 419 aa9.71□□□□□ -0.85
TRIM6-212ENST00000621176 NLRC4Q9NPP4 1024 aa9.71□□□□□ -0.85
TRIM6-212ENST00000621176 BIN2Q9UBW5 565 aaPredicted RBP9.71□□□□□ -0.85
TRIM6-212ENST00000621176 ZNF652Q9Y2D9 606 aa9.71□□□□□ -0.85
TRIM6-212ENST00000621176 RASA1P20936 1047 aa9.71□□□□□ -0.86
TRIM6-212ENST00000621176 DNA2P51530 1060 aa9.71□□□□□ -0.86
TRIM6-212ENST00000621176 PDCLQ13371 301 aa9.71□□□□□ -0.86
TRIM6-212ENST00000621176 DIXDC1Q155Q3 683 aa9.71□□□□□ -0.86
TRIM6-212ENST00000621176 GRIK5Q16478 980 aa9.71□□□□□ -0.86
TRIM6-212ENST00000621176 ALS2CLQ60I27 953 aa9.71□□□□□ -0.86
TRIM6-212ENST00000621176 USP17L2Q6R6M4 530 aa9.71□□□□□ -0.86
TRIM6-212ENST00000621176 ZNF444Q8N0Y2 327 aaPredicted RBP9.71□□□□□ -0.86
TRIM6-212ENST00000621176 CALML4Q96GE6 196 aa9.71□□□□□ -0.86
TRIM6-212ENST00000621176 NUDT12Q9BQG2 462 aa9.71□□□□□ -0.86
TRIM6-212ENST00000621176 TMEM260Q9NX78 707 aa9.71□□□□□ -0.86
TRIM6-212ENST00000621176 NFU1Q9UMS0 254 aa9.71□□□□□ -0.86
TRIM6-212ENST00000621176 CASZ1Q86V15 1759 aa9.71□□□□□ -0.86
TRIM6-212ENST00000621176 TLR2O60603 784 aa9.7□□□□□ -0.86
TRIM6-212ENST00000621176 HSF2BPO75031 334 aa9.7□□□□□ -0.86
TRIM6-212ENST00000621176 ATP1A2P50993 1020 aa9.7□□□□□ -0.86
TRIM6-212ENST00000621176 KCNQ4P56696 695 aa9.7□□□□□ -0.86
TRIM6-212ENST00000621176 APBA1Q02410 837 aa9.7□□□□□ -0.86
TRIM6-212ENST00000621176 PDXDC1Q6P996 788 aa9.7□□□□□ -0.86
TRIM6-212ENST00000621176 UNC13DQ70J99 1090 aa9.7□□□□□ -0.86
TRIM6-212ENST00000621176 KCNK18Q7Z418 384 aa9.7□□□□□ -0.86
TRIM6-212ENST00000621176 GUF1Q8N442 669 aaKnown RBP9.7□□□□□ -0.86
TRIM6-212ENST00000621176 TGFBRAP1Q8WUH2 860 aa9.7□□□□□ -0.86
TRIM6-212ENST00000621176 LARP4BQ92615 738 aaKnown RBP9.7□□□□□ -0.86
TRIM6-212ENST00000621176 SAP30BPQ9UHR5 308 aaKnown RBP9.7□□□□□ -0.86
TRIM6-212ENST00000621176 POTEMA6NI47 508 aa9.7□□□□□ -0.86
TRIM6-212ENST00000621176 EDIL3O43854 480 aa9.7□□□□□ -0.86
TRIM6-212ENST00000621176 GTF2A1P52655 376 aaPredicted RBP9.7□□□□□ -0.86
TRIM6-212ENST00000621176 NAP1L1P55209 391 aaKnown RBP9.7□□□□□ -0.86
TRIM6-212ENST00000621176 SKOR1P84550 965 aa9.7□□□□□ -0.86
TRIM6-212ENST00000621176 TRADDQ15628 312 aa9.7□□□□□ -0.86
TRIM6-212ENST00000621176 TDRD12Q587J7 1177 aaKnown RBP9.7□□□□□ -0.86
TRIM6-212ENST00000621176 CLEC4GQ6UXB4 293 aa9.7□□□□□ -0.86
TRIM6-212ENST00000621176 CACNA2D4Q7Z3S7 1137 aa9.7□□□□□ -0.86
TRIM6-212ENST00000621176 IQCKQ8N0W5 287 aa9.7□□□□□ -0.86
TRIM6-212ENST00000621176 NOX5Q96PH1 765 aa9.7□□□□□ -0.86
TRIM6-212ENST00000621176 MTMR9Q96QG7 549 aa9.7□□□□□ -0.86
TRIM6-212ENST00000621176 RUFY1Q96T51 708 aa9.7□□□□□ -0.86
TRIM6-212ENST00000621176 SPZ1Q9BXG8 430 aa9.7□□□□□ -0.86
TRIM6-212ENST00000621176 EPB41L5Q9HCM4 733 aa9.7□□□□□ -0.86
TRIM6-212ENST00000621176 C6orf50Q9HD87 102 aa9.7□□□□□ -0.86
TRIM6-212ENST00000621176 PVALEFA0A1B0GWK0 134 aa9.69□□□□□ -0.86
TRIM6-212ENST00000621176 SHTN1A0MZ66 631 aa9.69□□□□□ -0.86
TRIM6-212ENST00000621176 ZNF233A6NK53 670 aa9.69□□□□□ -0.86
TRIM6-212ENST00000621176 SLC37A4O43826 429 aa9.69□□□□□ -0.86
TRIM6-212ENST00000621176 ERLIN2O94905 339 aa9.69□□□□□ -0.86
TRIM6-212ENST00000621176 FTCDO95954 541 aa9.69□□□□□ -0.86
TRIM6-212ENST00000621176 TNFRSF8P28908 595 aa9.69□□□□□ -0.86
TRIM6-212ENST00000621176 NNTQ13423 1086 aa9.69□□□□□ -0.86
TRIM6-212ENST00000621176 TBC1D9BQ66K14 1250 aa9.69□□□□□ -0.86
TRIM6-212ENST00000621176 IFT81Q8WYA0 676 aa9.69□□□□□ -0.86
TRIM6-212ENST00000621176 PIK3R5Q8WYR1 880 aa9.69□□□□□ -0.86
TRIM6-212ENST00000621176 CCDC43Q96MW1 224 aaKnown RBP9.69□□□□□ -0.86
TRIM6-212ENST00000621176 PIGSQ96S52 555 aa9.69□□□□□ -0.86
TRIM6-212ENST00000621176 TANGO6Q9C0B7 1094 aa9.69□□□□□ -0.86
TRIM6-212ENST00000621176 KANSL2Q9H9L4 492 aa9.69□□□□□ -0.86
TRIM6-212ENST00000621176 GDF3Q9NR23 364 aa9.69□□□□□ -0.86
TRIM6-212ENST00000621176 PACSIN2Q9UNF0 486 aaPredicted RBP9.69□□□□□ -0.86
TRIM6-212ENST00000621176 ZNF335Q9H4Z2 1342 aaPredicted RBP9.69□□□□□ -0.86
TRIM6-212ENST00000621176 PALMO75781 387 aa9.69□□□□□ -0.86
TRIM6-212ENST00000621176 NOL4O94818 638 aa9.69□□□□□ -0.86
TRIM6-212ENST00000621176 HEXIM1O94992 359 aaKnown RBP9.69□□□□□ -0.86
TRIM6-212ENST00000621176 GNA11P29992 359 aa9.69□□□□□ -0.86
TRIM6-212ENST00000621176 RNASE9P60153 205 aaKnown RBP9.69□□□□□ -0.86
TRIM6-212ENST00000621176 GUCY2DQ02846 1103 aa9.69□□□□□ -0.86
TRIM6-212ENST00000621176 CFAP221Q4G0U5 840 aa9.69□□□□□ -0.86
TRIM6-212ENST00000621176 MAPKAPK5Q8IW41 473 aa9.69□□□□□ -0.86
TRIM6-212ENST00000621176 DDX12PQ92771 950 aa9.69□□□□□ -0.86
TRIM6-212ENST00000621176 UBA5Q9GZZ9 404 aa9.69□□□□□ -0.86
TRIM6-212ENST00000621176 ROBO3Q96MS0 1386 aa9.69□□□□□ -0.86
TRIM6-212ENST00000621176 SSU72P8A0A1W2PR75 194 aa9.69□□□□□ -0.86
TRIM6-212ENST00000621176 TDP2O95551 362 aa9.69□□□□□ -0.86
TRIM6-212ENST00000621176 KLRC1P26715 233 aa9.69□□□□□ -0.86
TRIM6-212ENST00000621176 LRRC63Q05C16 580 aa9.69□□□□□ -0.86
TRIM6-212ENST00000621176 EHHADHQ08426 723 aa9.69□□□□□ -0.86
TRIM6-212ENST00000621176 FBXW10Q5XX13 1052 aa9.69□□□□□ -0.86
TRIM6-212ENST00000621176 REXO1Q8N1G1 1221 aaKnown RBP9.69□□□□□ -0.86
TRIM6-212ENST00000621176 RNF10Q8N5U6 811 aaKnown RBP9.69□□□□□ -0.86
TRIM6-212ENST00000621176 MARCH10Q8NA82 808 aaPredicted RBP9.69□□□□□ -0.86
TRIM6-212ENST00000621176 FAM107BQ9H098 131 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms