RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 UTYO14607 1347 aa9.13□□□□□ -0.95
ALMS1-208ENST00000620466 SNAP23O00161 211 aa9.13□□□□□ -0.95
ALMS1-208ENST00000620466 NMT2O60551 498 aa9.13□□□□□ -0.95
ALMS1-208ENST00000620466 KIF11P52732 1056 aa9.13□□□□□ -0.95
ALMS1-208ENST00000620466 NAA25Q14CX7 972 aa9.13□□□□□ -0.95
ALMS1-208ENST00000620466 E4F1Q66K89 784 aaPredicted RBP9.13□□□□□ -0.95
ALMS1-208ENST00000620466 USP17L2Q6R6M4 530 aa9.13□□□□□ -0.95
ALMS1-208ENST00000620466 SPATS2Q86XZ4 545 aaKnown RBP9.13□□□□□ -0.95
ALMS1-208ENST00000620466 FAM133AQ8N9E0 248 aa9.13□□□□□ -0.95
ALMS1-208ENST00000620466 NSMCE1Q8WV22 266 aa9.13□□□□□ -0.95
ALMS1-208ENST00000620466 RIC8AQ9NPQ8 531 aa9.13□□□□□ -0.95
ALMS1-208ENST00000620466 STK17AQ9UEE5 414 aa9.13□□□□□ -0.95
ALMS1-208ENST00000620466 COL4A3BPQ9Y5P4 624 aa9.13□□□□□ -0.95
ALMS1-208ENST00000620466 MROH1Q8NDA8 1641 aa9.13□□□□□ -0.95
ALMS1-208ENST00000620466 SALL3Q9BXA9 1300 aa9.13□□□□□ -0.95
ALMS1-208ENST00000620466 KCTD1Q719H9 257 aa9.13□□□□□ -0.95
ALMS1-208ENST00000620466 HAUS2Q9NVX0 235 aa9.13□□□□□ -0.95
ALMS1-208ENST00000620466 FBXO2Q9UK22 296 aaPredicted RBP9.13□□□□□ -0.95
ALMS1-208ENST00000620466 JRKLQ9Y4A0 524 aa9.13□□□□□ -0.95
ALMS1-208ENST00000620466 MROH7-TTC4A0A0A0MT08 1334 aa9.13□□□□□ -0.95
ALMS1-208ENST00000620466 K7ENM7 598 aa9.13□□□□□ -0.95
ALMS1-208ENST00000620466 PPP2R5DQ14738 602 aa9.13□□□□□ -0.95
ALMS1-208ENST00000620466 PFKFB3Q16875 520 aaPredicted RBP9.13□□□□□ -0.95
ALMS1-208ENST00000620466 MIER3Q7Z3K6 550 aa9.13□□□□□ -0.95
ALMS1-208ENST00000620466 FBXO11Q86XK2 927 aa9.13□□□□□ -0.95
ALMS1-208ENST00000620466 FNBP4Q8N3X1 1017 aaPredicted RBP9.13□□□□□ -0.95
ALMS1-208ENST00000620466 ENAHQ8N8S7 591 aaPredicted RBP9.13□□□□□ -0.95
ALMS1-208ENST00000620466 PRCPP42785 496 aa9.12□□□□□ -0.95
ALMS1-208ENST00000620466 ALX1Q15699 326 aa9.12□□□□□ -0.95
ALMS1-208ENST00000620466 DOK7Q18PE1 504 aa9.12□□□□□ -0.95
ALMS1-208ENST00000620466 FYB2Q5VWT5 728 aa9.12□□□□□ -0.95
ALMS1-208ENST00000620466 BSDC1Q9NW68 430 aaPredicted RBP9.12□□□□□ -0.95
ALMS1-208ENST00000620466 GSG1L2A8MUP6 293 aa9.12□□□□□ -0.95
ALMS1-208ENST00000620466 AFPP02771 609 aaKnown RBP9.12□□□□□ -0.95
ALMS1-208ENST00000620466 H2AFZP0C0S5 128 aa9.12□□□□□ -0.95
ALMS1-208ENST00000620466 NR2F2P24468 414 aa9.12□□□□□ -0.95
ALMS1-208ENST00000620466 PPP2R5CQ13362 524 aa9.12□□□□□ -0.95
ALMS1-208ENST00000620466 NAA35Q5VZE5 725 aa9.12□□□□□ -0.95
ALMS1-208ENST00000620466 H2AFVQ71UI9 128 aa9.12□□□□□ -0.95
ALMS1-208ENST00000620466 CACNA2D3Q8IZS8 1091 aa9.12□□□□□ -0.95
ALMS1-208ENST00000620466 ANKRD42Q8N9B4 389 aa9.12□□□□□ -0.95
ALMS1-208ENST00000620466 METTL14Q9HCE5 456 aaKnown RBP9.12□□□□□ -0.95
ALMS1-208ENST00000620466 LEMD3Q9Y2U8 911 aa9.12□□□□□ -0.95
ALMS1-208ENST00000620466 SPATA31A3Q5VYP0 1347 aa9.12□□□□□ -0.95
ALMS1-208ENST00000620466 APBA3O96018 575 aa9.12□□□□□ -0.95
ALMS1-208ENST00000620466 UBE2SQ16763 222 aa9.12□□□□□ -0.95
ALMS1-208ENST00000620466 CERKLQ49MI3 558 aaPredicted RBP9.12□□□□□ -0.95
ALMS1-208ENST00000620466 TBC1D31Q96DN5 1066 aa9.12□□□□□ -0.95
ALMS1-208ENST00000620466 SERPING1P05155 500 aa9.12□□□□□ -0.95
ALMS1-208ENST00000620466 SLC16A2P36021 539 aa9.12□□□□□ -0.95
ALMS1-208ENST00000620466 MCTP2Q6DN12 878 aa9.12□□□□□ -0.95
ALMS1-208ENST00000620466 NDST4Q9H3R1 872 aa9.12□□□□□ -0.95
ALMS1-208ENST00000620466 CEMIPQ8WUJ3 1361 aa9.12□□□□□ -0.95
ALMS1-208ENST00000620466 LGALS16A8MUM7 142 aa9.12□□□□□ -0.95
ALMS1-208ENST00000620466 CYP4A11Q02928 519 aa9.12□□□□□ -0.95
ALMS1-208ENST00000620466 FAM102BQ5T8I3 360 aa9.12□□□□□ -0.95
ALMS1-208ENST00000620466 AFAP1L2Q8N4X5 818 aa9.12□□□□□ -0.95
ALMS1-208ENST00000620466 ANO3Q9BYT9 981 aa9.12□□□□□ -0.95
ALMS1-208ENST00000620466 USP21Q9UK80 565 aa9.12□□□□□ -0.95
ALMS1-208ENST00000620466 RABGAP1Q9Y3P9 1069 aa9.12□□□□□ -0.95
ALMS1-208ENST00000620466 BZW2Q9Y6E2 419 aaKnown RBP9.12□□□□□ -0.95
ALMS1-208ENST00000620466 hCG_1984214I3L0E3 225 aa9.11□□□□□ -0.95
ALMS1-208ENST00000620466 RFX5P48382 616 aaPredicted RBP9.11□□□□□ -0.95
ALMS1-208ENST00000620466 MYL7Q01449 175 aa9.11□□□□□ -0.95
ALMS1-208ENST00000620466 PABPC4Q13310 644 aaKnown RBP eCLIP9.11□□□□□ -0.95
ALMS1-208ENST00000620466 ARHGEF16Q5VV41 709 aa9.11□□□□□ -0.95
ALMS1-208ENST00000620466 SLFN13Q68D06 897 aa9.11□□□□□ -0.95
ALMS1-208ENST00000620466 GADL1Q6ZQY3 521 aa9.11□□□□□ -0.95
ALMS1-208ENST00000620466 SGMS1Q86VZ5 419 aa9.11□□□□□ -0.95
ALMS1-208ENST00000620466 ZNF713Q8N859 430 aaPredicted RBP9.11□□□□□ -0.95
ALMS1-208ENST00000620466 KCNB2Q92953 911 aa9.11□□□□□ -0.95
ALMS1-208ENST00000620466 AS3MTQ9HBK9 375 aa9.11□□□□□ -0.95
ALMS1-208ENST00000620466 ADGRG1Q9Y653 693 aa9.11□□□□□ -0.95
ALMS1-208ENST00000620466 TNS3Q68CZ2 1445 aa9.11□□□□□ -0.95
ALMS1-208ENST00000620466 TTLL1O95922 423 aa9.11□□□□□ -0.95
ALMS1-208ENST00000620466 GJA10Q969M2 543 aa9.11□□□□□ -0.95
ALMS1-208ENST00000620466 WDR24Q96S15 920 aa9.11□□□□□ -0.95
ALMS1-208ENST00000620466 PCDHA1Q9Y5I3 950 aa9.11□□□□□ -0.95
ALMS1-208ENST00000620466 FDPSP14324 419 aaKnown RBP9.11□□□□□ -0.95
ALMS1-208ENST00000620466 GBP1P32455 592 aa9.11□□□□□ -0.95
ALMS1-208ENST00000620466 RCAN1P53805 252 aa9.11□□□□□ -0.95
ALMS1-208ENST00000620466 FMR1Q06787 632 aaKnown RBP eCLIP9.11□□□□□ -0.95
ALMS1-208ENST00000620466 MTF1Q14872 753 aa9.11□□□□□ -0.95
ALMS1-208ENST00000620466 PDIA6Q15084 440 aa9.11□□□□□ -0.95
ALMS1-208ENST00000620466 PNMA8AQ86V59 439 aaPredicted RBP9.11□□□□□ -0.95
ALMS1-208ENST00000620466 CCDC125Q86Z20 511 aa9.11□□□□□ -0.95
ALMS1-208ENST00000620466 CPXCR1Q8N123 301 aa9.11□□□□□ -0.95
ALMS1-208ENST00000620466 UHMK1Q8TAS1 419 aaKnown RBP9.11□□□□□ -0.95
ALMS1-208ENST00000620466 SH3RF3Q8TEJ3 882 aaPredicted RBP9.11□□□□□ -0.95
ALMS1-208ENST00000620466 MAIP1Q8WWC4 291 aa9.11□□□□□ -0.95
ALMS1-208ENST00000620466 FAM184BQ9ULE4 1060 aa9.11□□□□□ -0.95
ALMS1-208ENST00000620466 TBC1D8O95759 1140 aa9.11□□□□□ -0.95
ALMS1-208ENST00000620466 POLR2MP0CAP2 368 aa9.11□□□□□ -0.95
ALMS1-208ENST00000620466 ANTXR2P58335 489 aa9.11□□□□□ -0.95
ALMS1-208ENST00000620466 CD2APQ9Y5K6 639 aa9.11□□□□□ -0.95
ALMS1-208ENST00000620466 AK9Q5TCS8 1911 aa9.11□□□□□ -0.95
ALMS1-208ENST00000620466 ALDH1B1P30837 517 aa9.11□□□□□ -0.95
ALMS1-208ENST00000620466 MRPS25P82663 173 aaKnown RBP9.11□□□□□ -0.95
ALMS1-208ENST00000620466 ICA1Q05084 483 aa9.11□□□□□ -0.95
ALMS1-208ENST00000620466 PSMD2Q13200 908 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms