RNA–Protein interactions for RNA: ENST00000619785.1

SENP3-210, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-210ENST00000619785 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.97□□□□□ -0.973e-6■■■■■ 29.7
SENP3-210ENST00000619785 TXNRD2Q9NNW7 524 aa8.97□□□□□ -0.97
SENP3-210ENST00000619785 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.97□□□□□ -0.97
SENP3-210ENST00000619785 RBPJLQ9UBG7 517 aa8.97□□□□□ -0.97
SENP3-210ENST00000619785 DENND2AQ9ULE3 1009 aa8.97□□□□□ -0.97
SENP3-210ENST00000619785 SYNGAP1Q96PV0 1343 aa8.97□□□□□ -0.97
SENP3-210ENST00000619785 TRANK1O15050 2925 aa8.97□□□□□ -0.97
SENP3-210ENST00000619785 REV3LO60673 3130 aa8.96□□□□□ -0.97
SENP3-210ENST00000619785 SLURP2P0DP57 97 aa8.96□□□□□ -0.98
SENP3-210ENST00000619785 RGS2P41220 211 aa8.96□□□□□ -0.98
SENP3-210ENST00000619785 BACE1P56817 501 aa8.96□□□□□ -0.98
SENP3-210ENST00000619785 HERVK_113P62684 666 aa8.96□□□□□ -0.98
SENP3-210ENST00000619785 EXOSC9Q06265 439 aaKnown RBP8.96□□□□□ -0.98
SENP3-210ENST00000619785 ERMP1Q7Z2K6 904 aa8.96□□□□□ -0.98
SENP3-210ENST00000619785 LPAR1Q92633 364 aa8.96□□□□□ -0.98
SENP3-210ENST00000619785 GPRASP2Q96D09 838 aa8.96□□□□□ -0.98
SENP3-210ENST00000619785 NOC4LQ9BVI4 516 aaKnown RBP8.96□□□□□ -0.98
SENP3-210ENST00000619785 USP44Q9H0E7 712 aa8.96□□□□□ -0.98
SENP3-210ENST00000619785 CRISPLD1Q9H336 500 aa8.96□□□□□ -0.98
SENP3-210ENST00000619785 RUBCNLQ9H714 662 aa8.96□□□□□ -0.98
SENP3-210ENST00000619785 HERC5Q9UII4 1024 aaKnown RBP8.96□□□□□ -0.98
SENP3-210ENST00000619785 MROH7-TTC4A0A0A0MT08 1334 aa8.96□□□□□ -0.98
SENP3-210ENST00000619785 CHD7Q9P2D1 2997 aa8.96□□□□□ -0.98
SENP3-210ENST00000619785 FIGNL2A6NMB9 653 aa8.95□□□□□ -0.98
SENP3-210ENST00000619785 C19orf81C9J6K1 198 aa8.95□□□□□ -0.98
SENP3-210ENST00000619785 ZKSCAN1P17029 563 aaPredicted RBP8.95□□□□□ -0.98
SENP3-210ENST00000619785 CYP2B6P20813 491 aa8.95□□□□□ -0.98
SENP3-210ENST00000619785 HMGCS2P54868 508 aa8.95□□□□□ -0.98
SENP3-210ENST00000619785 ERVK-24P63145 666 aa8.95□□□□□ -0.98
SENP3-210ENST00000619785 PWP1Q13610 501 aa8.95□□□□□ -0.98
SENP3-210ENST00000619785 SHHQ15465 462 aa8.95□□□□□ -0.98
SENP3-210ENST00000619785 EFHC2Q5JST6 749 aa8.95□□□□□ -0.98
SENP3-210ENST00000619785 GIMAP6Q6P9H5 292 aa8.95□□□□□ -0.98
SENP3-210ENST00000619785 GPR142Q7Z601 462 aa8.95□□□□□ -0.98
SENP3-210ENST00000619785 CCDC84Q86UT8 332 aaPredicted RBP8.95□□□□□ -0.98
SENP3-210ENST00000619785 NLRP8Q86W28 1048 aa8.95□□□□□ -0.98
SENP3-210ENST00000619785 RELL1Q8IUW5 271 aa8.95□□□□□ -0.98
SENP3-210ENST00000619785 GPRC5AQ8NFJ5 357 aa8.95□□□□□ -0.98
SENP3-210ENST00000619785 KLHDC4Q8TBB5 520 aa8.95□□□□□ -0.98
SENP3-210ENST00000619785 C12orf42Q96LP6 360 aa8.95□□□□□ -0.98
SENP3-210ENST00000619785 TMA7Q9Y2S6 64 aaKnown RBP8.95□□□□□ -0.98
SENP3-210ENST00000619785 ROBO3Q96MS0 1386 aa8.95□□□□□ -0.98
SENP3-210ENST00000619785 COL11A1P12107 1806 aaPredicted RBP8.94□□□□□ -0.98
SENP3-210ENST00000619785 GRNP28799 593 aaKnown RBP8.94□□□□□ -0.98
SENP3-210ENST00000619785 BTDP43251 543 aa8.94□□□□□ -0.98
SENP3-210ENST00000619785 PHKA1P46020 1223 aa8.94□□□□□ -0.98
SENP3-210ENST00000619785 DDX10Q13206 875 aaKnown RBP8.94□□□□□ -0.98
SENP3-210ENST00000619785 RASGRF1Q13972 1273 aa8.94□□□□□ -0.98
SENP3-210ENST00000619785 CCL14Q16627 93 aa8.94□□□□□ -0.98
SENP3-210ENST00000619785 ATP2B3Q16720 1220 aa8.94□□□□□ -0.98
SENP3-210ENST00000619785 CCDC144BQ3MJ40 725 aa8.94□□□□□ -0.98
SENP3-210ENST00000619785 C9orf50Q5SZB4 431 aa8.94□□□□□ -0.98
SENP3-210ENST00000619785 KIAA0319Q5VV43 1072 aa8.94□□□□□ -0.98
SENP3-210ENST00000619785 MYLIPQ8WY64 445 aa8.94□□□□□ -0.98
SENP3-210ENST00000619785 GAS2L1Q99501 681 aaPredicted RBP8.94□□□□□ -0.98
SENP3-210ENST00000619785 P2RX7Q99572 595 aaKnown RBP8.94□□□□□ -0.98
SENP3-210ENST00000619785 LBHD1Q9BQE6 289 aaPredicted RBP8.94□□□□□ -0.98
SENP3-210ENST00000619785 SPON2Q9BUD6 331 aa8.94□□□□□ -0.98
SENP3-210ENST00000619785 PORCNQ9H237 461 aa8.94□□□□□ -0.98
SENP3-210ENST00000619785 AS3MTQ9HBK9 375 aa8.94□□□□□ -0.98
SENP3-210ENST00000619785 COPRSQ9NQ92 184 aa8.94□□□□□ -0.98
SENP3-210ENST00000619785 GNL3LQ9NVN8 582 aaKnown RBP8.94□□□□□ -0.98
SENP3-210ENST00000619785 KBTBD4Q9NVX7 518 aa8.94□□□□□ -0.98
SENP3-210ENST00000619785 PLA2G2EQ9NZK7 142 aa8.94□□□□□ -0.98
SENP3-210ENST00000619785 KANSL3Q9P2N6 904 aa8.94□□□□□ -0.98
SENP3-210ENST00000619785 DDX20Q9UHI6 824 aaKnown RBP8.94□□□□□ -0.98
SENP3-210ENST00000619785 PTPRCP08575 1304 aa8.94□□□□□ -0.98
SENP3-210ENST00000619785 MYH8P13535 1937 aa8.93□□□□□ -0.98
SENP3-210ENST00000619785 CNMDO75829 334 aa8.93□□□□□ -0.98
SENP3-210ENST00000619785 F11P03951 625 aa8.93□□□□□ -0.98
SENP3-210ENST00000619785 ASNSP08243 561 aa8.93□□□□□ -0.98
SENP3-210ENST00000619785 CYBAP13498 195 aa8.93□□□□□ -0.98
SENP3-210ENST00000619785 FOSL2P15408 326 aa8.93□□□□□ -0.98
SENP3-210ENST00000619785 ATF4P18848 351 aaPredicted RBP8.93□□□□□ -0.98
SENP3-210ENST00000619785 NCLP19338 710 aaKnown RBP8.93□□□□□ -0.98
SENP3-210ENST00000619785 RTP1P59025 263 aa8.93□□□□□ -0.98
SENP3-210ENST00000619785 RBL2Q08999 1139 aa8.93□□□□□ -0.98
SENP3-210ENST00000619785 GRB14Q14449 540 aa8.93□□□□□ -0.98
SENP3-210ENST00000619785 CCDC85BQ15834 202 aaPredicted RBP8.93□□□□□ -0.98
SENP3-210ENST00000619785 SAMD5Q5TGI4 173 aa8.93□□□□□ -0.98
SENP3-210ENST00000619785 KRT25Q7Z3Z0 450 aa8.93□□□□□ -0.98
SENP3-210ENST00000619785 PLEKHH3Q7Z736 793 aa8.93□□□□□ -0.98
SENP3-210ENST00000619785 MCF2L2Q86YR7 1114 aa8.93□□□□□ -0.98
SENP3-210ENST00000619785 ATXN2LQ8WWM7 1075 aaKnown RBP8.93□□□□□ -0.98
SENP3-210ENST00000619785 DNAJC18Q9H819 358 aa8.93□□□□□ -0.98
SENP3-210ENST00000619785 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.93□□□□□ -0.98
SENP3-210ENST00000619785 PDLIM7Q9NR12 457 aa8.93□□□□□ -0.98
SENP3-210ENST00000619785 FLRT1Q9NZU1 646 aa8.93□□□□□ -0.98
SENP3-210ENST00000619785 DYRK1BQ9Y463 629 aa8.93□□□□□ -0.98
SENP3-210ENST00000619785 TCF20Q9UGU0 1960 aaKnown RBP8.93□□□□□ -0.98
SENP3-210ENST00000619785 ZNF521Q96K83 1311 aa8.92□□□□□ -0.98
SENP3-210ENST00000619785 SLC15A5A6NIM6 579 aa8.92□□□□□ -0.98
SENP3-210ENST00000619785 SASH3O75995 380 aa8.92□□□□□ -0.98
SENP3-210ENST00000619785 FGRP09769 529 aa8.92□□□□□ -0.98
SENP3-210ENST00000619785 ZEB1P37275 1124 aaPredicted RBP8.92□□□□□ -0.98
SENP3-210ENST00000619785 JAG1P78504 1218 aa8.92□□□□□ -0.98
SENP3-210ENST00000619785 PDE3AQ14432 1141 aa8.92□□□□□ -0.98
SENP3-210ENST00000619785 AKNAD1Q5T1N1 836 aa8.92□□□□□ -0.98
SENP3-210ENST00000619785 OLFML2BQ68BL8 750 aa8.92□□□□□ -0.98
SENP3-210ENST00000619785 SPTY2D1Q68D10 685 aaPredicted RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms