RNA–Protein interactions for RNA: ENST00000619146.1

SYN3-213, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-213ENST00000619146 GOLGA8BA8MQT2 603 aa10.69□□□□□ -0.7
SYN3-213ENST00000619146 ZBED4O75132 1171 aa10.69□□□□□ -0.7
SYN3-213ENST00000619146 TTLL1O95922 423 aa10.69□□□□□ -0.7
SYN3-213ENST00000619146 CALM1P0DP23 149 aa10.69□□□□□ -0.7
SYN3-213ENST00000619146 CALM2P0DP24 149 aa10.69□□□□□ -0.7
SYN3-213ENST00000619146 CALM3P0DP25 149 aa10.69□□□□□ -0.7
SYN3-213ENST00000619146 TOP1P11387 765 aaKnown RBP10.69□□□□□ -0.7
SYN3-213ENST00000619146 CYP2C9P11712 490 aa10.69□□□□□ -0.7
SYN3-213ENST00000619146 ATP2A2P16615 1042 aaKnown RBP10.69□□□□□ -0.7
SYN3-213ENST00000619146 COPB2P35606 906 aa10.69□□□□□ -0.7
SYN3-213ENST00000619146 NOVP48745 357 aa10.69□□□□□ -0.7
SYN3-213ENST00000619146 APOBRQ0VD83 1088 aa10.69□□□□□ -0.7
SYN3-213ENST00000619146 PPP2R5BQ15173 497 aa10.69□□□□□ -0.7
SYN3-213ENST00000619146 TLK2Q86UE8 772 aa10.69□□□□□ -0.7
SYN3-213ENST00000619146 LRRC47Q8N1G4 583 aaKnown RBP10.69□□□□□ -0.7
SYN3-213ENST00000619146 MSL3Q8N5Y2 521 aaKnown RBP10.69□□□□□ -0.7
SYN3-213ENST00000619146 VWCEQ96DN2 955 aa10.69□□□□□ -0.7
SYN3-213ENST00000619146 CEP95Q96GE4 821 aa10.69□□□□□ -0.7
SYN3-213ENST00000619146 INTS4Q96HW7 963 aaKnown RBP10.69□□□□□ -0.7
SYN3-213ENST00000619146 PURBQ96QR8 312 aaKnown RBP10.69□□□□□ -0.7
SYN3-213ENST00000619146 ZKSCAN3Q9BRR0 538 aa10.69□□□□□ -0.7
SYN3-213ENST00000619146 KATNBL1Q9H079 304 aa10.69□□□□□ -0.7
SYN3-213ENST00000619146 SLKQ9H2G2 1235 aaPredicted RBP10.69□□□□□ -0.7
SYN3-213ENST00000619146 KAT14Q9H8E8 782 aa10.69□□□□□ -0.7
SYN3-213ENST00000619146 GPHNQ9NQX3 736 aaPredicted RBP10.69□□□□□ -0.7
SYN3-213ENST00000619146 MTMR4Q9NYA4 1195 aa10.69□□□□□ -0.7
SYN3-213ENST00000619146 CLIP2Q9UDT6 1046 aa10.69□□□□□ -0.7
SYN3-213ENST00000619146 NAP1L2Q9ULW6 460 aaPredicted RBP10.69□□□□□ -0.7
SYN3-213ENST00000619146 SYNPO2Q9UMS6 1093 aa10.69□□□□□ -0.7
SYN3-213ENST00000619146 HCN4Q9Y3Q4 1203 aa10.69□□□□□ -0.7
SYN3-213ENST00000619146 MTCH2Q9Y6C9 303 aa10.69□□□□□ -0.7
SYN3-213ENST00000619146 LOXHD1Q8IVV2 1947 aa10.68□□□□□ -0.7
SYN3-213ENST00000619146 LAMA4Q16363 1823 aa10.68□□□□□ -0.7
SYN3-213ENST00000619146 IGKV6D-41A0A0C4DH26 115 aa10.68□□□□□ -0.7
SYN3-213ENST00000619146 SOWAHBA6NEL2 793 aa10.68□□□□□ -0.7
SYN3-213ENST00000619146 ZBTB43O43298 467 aa10.68□□□□□ -0.7
SYN3-213ENST00000619146 NMT2O60551 498 aa10.68□□□□□ -0.7
SYN3-213ENST00000619146 PFKFB2O60825 505 aa10.68□□□□□ -0.7
SYN3-213ENST00000619146 DDAH1O94760 285 aa10.68□□□□□ -0.7
SYN3-213ENST00000619146 SMPD1P17405 629 aa10.68□□□□□ -0.7
SYN3-213ENST00000619146 PDIA3P30101 505 aaKnown RBP10.68□□□□□ -0.7
SYN3-213ENST00000619146 CHMP4BP1P59074 171 aa10.68□□□□□ -0.7
SYN3-213ENST00000619146 CUL4AQ13619 759 aa10.68□□□□□ -0.7
SYN3-213ENST00000619146 FSCN1Q16658 493 aaKnown RBP10.68□□□□□ -0.7
SYN3-213ENST00000619146 ME3Q16798 604 aa10.68□□□□□ -0.7
SYN3-213ENST00000619146 APOA5Q6Q788 366 aa10.68□□□□□ -0.7
SYN3-213ENST00000619146 TMCO2Q7Z6W1 182 aaPredicted RBP10.68□□□□□ -0.7
SYN3-213ENST00000619146 FBXO16Q8IX29 292 aaPredicted RBP10.68□□□□□ -0.7
SYN3-213ENST00000619146 PRPF38AQ8NAV1 312 aaKnown RBP10.68□□□□□ -0.7
SYN3-213ENST00000619146 LARP6Q9BRS8 491 aaKnown RBP10.68□□□□□ -0.7
SYN3-213ENST00000619146 AP5M1Q9H0R1 490 aa10.68□□□□□ -0.7
SYN3-213ENST00000619146 TRMT13Q9NUP7 481 aaKnown RBP10.68□□□□□ -0.7
SYN3-213ENST00000619146 BRPF3Q9ULD4 1205 aa10.68□□□□□ -0.7
SYN3-213ENST00000619146 STX8Q9UNK0 236 aa10.68□□□□□ -0.7
SYN3-213ENST00000619146 MTMR7Q9Y216 660 aa10.68□□□□□ -0.7
SYN3-213ENST00000619146 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.68□□□□□ -0.7
SYN3-213ENST00000619146 PCDHA11Q9Y5I1 949 aa10.68□□□□□ -0.7
SYN3-213ENST00000619146 GTPBP6O43824 516 aaPredicted RBP10.67□□□□□ -0.7
SYN3-213ENST00000619146 AAK1Q2M2I8 961 aa10.67□□□□□ -0.7
SYN3-213ENST00000619146 FAM47CQ5HY64 1035 aa10.67□□□□□ -0.7
SYN3-213ENST00000619146 TMEM31Q5JXX7 168 aa10.67□□□□□ -0.7
SYN3-213ENST00000619146 RCSD1Q6JBY9 416 aa10.67□□□□□ -0.7
SYN3-213ENST00000619146 CPLX2Q6PUV4 134 aaKnown RBP10.67□□□□□ -0.7
SYN3-213ENST00000619146 RASGRP2Q7LDG7 609 aa10.67□□□□□ -0.7
SYN3-213ENST00000619146 ZNF467Q7Z7K2 595 aaPredicted RBP10.67□□□□□ -0.7
SYN3-213ENST00000619146 ALYREFQ86V81 257 aaKnown RBP10.67□□□□□ -0.7
SYN3-213ENST00000619146 ZNF654Q8IZM8 581 aa10.67□□□□□ -0.7
SYN3-213ENST00000619146 GTF3C6Q969F1 213 aa10.67□□□□□ -0.7
SYN3-213ENST00000619146 AGBL1Q96MI9 1066 aa10.67□□□□□ -0.7
SYN3-213ENST00000619146 MAP3K14Q99558 947 aa10.67□□□□□ -0.7
SYN3-213ENST00000619146 LLPHQ9BRT6 129 aaKnown RBP10.67□□□□□ -0.7
SYN3-213ENST00000619146 NYAP2Q9P242 653 aa10.67□□□□□ -0.7
SYN3-213ENST00000619146 TLL1O43897 1013 aa10.66□□□□□ -0.7
SYN3-213ENST00000619146 CDKL5O76039 1030 aa10.66□□□□□ -0.7
SYN3-213ENST00000619146 MYL3P08590 195 aa10.66□□□□□ -0.7
SYN3-213ENST00000619146 ALAS1P13196 640 aa10.66□□□□□ -0.7
SYN3-213ENST00000619146 KIF5BP33176 963 aa10.66□□□□□ -0.7
SYN3-213ENST00000619146 GNAQP50148 359 aa10.66□□□□□ -0.7
SYN3-213ENST00000619146 METAP2P50579 478 aaKnown RBP eCLIP10.66□□□□□ -0.7
SYN3-213ENST00000619146 IKQ13123 557 aaPredicted RBP10.66□□□□□ -0.7
SYN3-213ENST00000619146 MICU3Q86XE3 530 aa10.66□□□□□ -0.7
SYN3-213ENST00000619146 RPUSD2Q8IZ73 545 aaKnown RBP10.66□□□□□ -0.7
SYN3-213ENST00000619146 FANCBQ8NB91 859 aa10.66□□□□□ -0.7
SYN3-213ENST00000619146 SLC43A3Q8NBI5 491 aa10.66□□□□□ -0.7
SYN3-213ENST00000619146 PNMA1Q8ND90 353 aa10.66□□□□□ -0.7
SYN3-213ENST00000619146 MKL1Q969V6 931 aa10.66□□□□□ -0.7
SYN3-213ENST00000619146 TMEM47Q9BQJ4 181 aa10.66□□□□□ -0.7
SYN3-213ENST00000619146 SLC38A10Q9HBR0 1119 aa10.66□□□□□ -0.7
SYN3-213ENST00000619146 SENP2Q9HC62 589 aa10.66□□□□□ -0.7
SYN3-213ENST00000619146 CD320Q9NPF0 282 aa10.66□□□□□ -0.7
SYN3-213ENST00000619146 C11orf16Q9NQ32 467 aa10.66□□□□□ -0.7
SYN3-213ENST00000619146 A1CFQ9NQ94 594 aaKnown RBP10.66□□□□□ -0.7
SYN3-213ENST00000619146 RNF146Q9NTX7 359 aa10.66□□□□□ -0.7
SYN3-213ENST00000619146 RBM28Q9NW13 759 aaKnown RBP10.66□□□□□ -0.7
SYN3-213ENST00000619146 MTUS1Q9ULD2 1270 aa10.66□□□□□ -0.7
SYN3-213ENST00000619146 GNEQ9Y223 722 aaKnown RBP10.66□□□□□ -0.7
SYN3-213ENST00000619146 NID2Q14112 1375 aa10.65□□□□□ -0.7
SYN3-213ENST00000619146 GOLGA8AA7E2F4 631 aa10.65□□□□□ -0.7
SYN3-213ENST00000619146 TMEM232C9JQI7 657 aa10.65□□□□□ -0.7
SYN3-213ENST00000619146 CPLX1O14810 134 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms