RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 PTPN21Q16825 1174 aa5.46□□□□□ -1.54
SNCA-213ENST00000618500 TCTN1Q2MV58 587 aa5.46□□□□□ -1.54
SNCA-213ENST00000618500 DEFB128Q7Z7B8 93 aa5.46□□□□□ -1.54
SNCA-213ENST00000618500 FBXO11Q86XK2 927 aa5.46□□□□□ -1.54
SNCA-213ENST00000618500 FBXO16Q8IX29 292 aaPredicted RBP5.46□□□□□ -1.54
SNCA-213ENST00000618500 SMRP1Q8NCR6 262 aa5.46□□□□□ -1.54
SNCA-213ENST00000618500 TOP1MTQ969P6 601 aa5.46□□□□□ -1.54
SNCA-213ENST00000618500 IWS1Q96ST2 819 aa5.46□□□□□ -1.54
SNCA-213ENST00000618500 PHOX2BQ99453 314 aa5.46□□□□□ -1.54
SNCA-213ENST00000618500 GPHNQ9NQX3 736 aaPredicted RBP5.46□□□□□ -1.54
SNCA-213ENST00000618500 FNDC1Q4ZHG4 1894 aaPredicted RBP5.45□□□□□ -1.54
SNCA-213ENST00000618500 STXBP3O00186 592 aa5.45□□□□□ -1.54
SNCA-213ENST00000618500 MBD4O95243 580 aa5.45□□□□□ -1.54
SNCA-213ENST00000618500 MYL3P08590 195 aa5.45□□□□□ -1.54
SNCA-213ENST00000618500 TRIM27P14373 513 aa5.45□□□□□ -1.54
SNCA-213ENST00000618500 SDR42E1Q8WUS8 393 aa5.45□□□□□ -1.54
SNCA-213ENST00000618500 ZNF689Q96CS4 500 aaPredicted RBP5.45□□□□□ -1.54
SNCA-213ENST00000618500 MAP3K20Q9NYL2 800 aaKnown RBP5.45□□□□□ -1.54
SNCA-213ENST00000618500 ZBTB47Q9UFB7 747 aaPredicted RBP5.45□□□□□ -1.54
SNCA-213ENST00000618500 ZMYM6O95789 1325 aa5.45□□□□□ -1.54
SNCA-213ENST00000618500 GH1P01241 217 aa5.45□□□□□ -1.54
SNCA-213ENST00000618500 FGRP09769 529 aa5.45□□□□□ -1.54
SNCA-213ENST00000618500 ARHGAP1Q07960 439 aa5.45□□□□□ -1.54
SNCA-213ENST00000618500 SLFN13Q68D06 897 aa5.45□□□□□ -1.54
SNCA-213ENST00000618500 GDF6Q6KF10 455 aaPredicted RBP5.45□□□□□ -1.54
SNCA-213ENST00000618500 KCNV1Q6PIU1 500 aa5.45□□□□□ -1.54
SNCA-213ENST00000618500 RASGRP2Q7LDG7 609 aa5.45□□□□□ -1.54
SNCA-213ENST00000618500 SERINC5Q86VE9 423 aa5.45□□□□□ -1.54
SNCA-213ENST00000618500 CLEC10AQ8IUN9 316 aa5.45□□□□□ -1.54
SNCA-213ENST00000618500 CMTR2Q8IYT2 770 aaKnown RBP5.45□□□□□ -1.54
SNCA-213ENST00000618500 PPTC7Q8NI37 304 aa5.45□□□□□ -1.54
SNCA-213ENST00000618500 ATP8B4Q8TF62 1192 aa5.45□□□□□ -1.54
SNCA-213ENST00000618500 KAT2BQ92831 832 aa5.45□□□□□ -1.54
SNCA-213ENST00000618500 PHF7Q9BWX1 381 aaPredicted RBP5.45□□□□□ -1.54
SNCA-213ENST00000618500 ARMT1Q9H993 441 aa5.45□□□□□ -1.54
SNCA-213ENST00000618500 PDGFCQ9NRA1 345 aa5.45□□□□□ -1.54
SNCA-213ENST00000618500 TCP11L1Q9NUJ3 509 aa5.45□□□□□ -1.54
SNCA-213ENST00000618500 COG6Q9Y2V7 657 aa5.45□□□□□ -1.54
SNCA-213ENST00000618500 SQORQ9Y6N5 450 aa5.45□□□□□ -1.54
SNCA-213ENST00000618500 DNAH12Q6ZR08 3092 aa5.45□□□□□ -1.54
SNCA-213ENST00000618500 ADGRA3Q8IWK6 1321 aa5.45□□□□□ -1.54
SNCA-213ENST00000618500 SURF6O75683 361 aaKnown RBP5.45□□□□□ -1.54
SNCA-213ENST00000618500 AVPR2P30518 371 aa5.45□□□□□ -1.54
SNCA-213ENST00000618500 CCDC96Q2M329 555 aa5.45□□□□□ -1.54
SNCA-213ENST00000618500 MAMSTRQ6ZN01 415 aa5.45□□□□□ -1.54
SNCA-213ENST00000618500 KIAA1211Q6ZU35 1233 aa5.45□□□□□ -1.54
SNCA-213ENST00000618500 SPRYD3Q8NCJ5 442 aa5.45□□□□□ -1.54
SNCA-213ENST00000618500 CLEC4DQ8WXI8 215 aa5.45□□□□□ -1.54
SNCA-213ENST00000618500 PPP2R3CQ969Q6 453 aa5.45□□□□□ -1.54
SNCA-213ENST00000618500 KIFC2Q96AC6 838 aa5.45□□□□□ -1.54
SNCA-213ENST00000618500 C17orf80Q9BSJ5 609 aa5.45□□□□□ -1.54
SNCA-213ENST00000618500 ZBED2Q9BTP6 218 aa5.45□□□□□ -1.54
SNCA-213ENST00000618500 CERS4Q9HA82 394 aa5.45□□□□□ -1.54
SNCA-213ENST00000618500 PAG1Q9NWQ8 432 aa5.45□□□□□ -1.54
SNCA-213ENST00000618500 MUTYHQ9UIF7 546 aa5.45□□□□□ -1.54
SNCA-213ENST00000618500 ANAPC4Q9UJX5 808 aa5.45□□□□□ -1.54
SNCA-213ENST00000618500 TET1Q8NFU7 2136 aa5.44□□□□□ -1.54
SNCA-213ENST00000618500 FSCN2O14926 492 aa5.44□□□□□ -1.54
SNCA-213ENST00000618500 ANP32CO43423 234 aa5.44□□□□□ -1.54
SNCA-213ENST00000618500 ZFYP08048 801 aaPredicted RBP5.44□□□□□ -1.54
SNCA-213ENST00000618500 PRKCSHP14314 528 aaPredicted RBP5.44□□□□□ -1.54
SNCA-213ENST00000618500 PSEN2P49810 448 aa5.44□□□□□ -1.54
SNCA-213ENST00000618500 CEP85Q6P2H3 762 aa5.44□□□□□ -1.54
SNCA-213ENST00000618500 RASGRP4Q8TDF6 673 aa5.44□□□□□ -1.54
SNCA-213ENST00000618500 SEPT8Q92599 483 aa5.44□□□□□ -1.54
SNCA-213ENST00000618500 PBXIP1Q96AQ6 731 aa5.44□□□□□ -1.54
SNCA-213ENST00000618500 KIF1BPQ96EK5 621 aa5.44□□□□□ -1.54
SNCA-213ENST00000618500 UIMC1Q96RL1 719 aa5.44□□□□□ -1.54
SNCA-213ENST00000618500 STRBPQ96SI9 672 aaKnown RBP5.44□□□□□ -1.54
SNCA-213ENST00000618500 FSD1Q9BTV5 496 aa5.44□□□□□ -1.54
SNCA-213ENST00000618500 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.44□□□□□ -1.54
SNCA-213ENST00000618500 TBX10O75333 385 aa5.44□□□□□ -1.54
SNCA-213ENST00000618500 SDHBP21912 280 aa5.44□□□□□ -1.54
SNCA-213ENST00000618500 BMPR1AP36894 532 aa5.44□□□□□ -1.54
SNCA-213ENST00000618500 ID4P47928 161 aa5.44□□□□□ -1.54
SNCA-213ENST00000618500 CLCN5P51795 746 aa5.44□□□□□ -1.54
SNCA-213ENST00000618500 OS9Q13438 667 aaPredicted RBP5.44□□□□□ -1.54
SNCA-213ENST00000618500 MBTPS1Q14703 1052 aa5.44□□□□□ -1.54
SNCA-213ENST00000618500 DGKDQ16760 1214 aa5.44□□□□□ -1.54
SNCA-213ENST00000618500 MUM1L1Q5H9M0 696 aa5.44□□□□□ -1.54
SNCA-213ENST00000618500 NUP88Q99567 741 aaPredicted RBP5.44□□□□□ -1.54
SNCA-213ENST00000618500 CHD7Q9P2D1 2997 aa5.44□□□□□ -1.54
SNCA-213ENST00000618500 PRR12Q9ULL5 1215 aa5.44□□□□□ -1.54
SNCA-213ENST00000618500 FRMPD4Q14CM0 1322 aa5.43□□□□□ -1.54
SNCA-213ENST00000618500 GSG1L2A8MUP6 293 aa5.43□□□□□ -1.54
SNCA-213ENST00000618500 PAPLNO95428 1278 aa5.43□□□□□ -1.54
SNCA-213ENST00000618500 CASTP20810 708 aaKnown RBP5.43□□□□□ -1.54
SNCA-213ENST00000618500 LAMC2Q13753 1193 aa5.43□□□□□ -1.54
SNCA-213ENST00000618500 IER5LQ5T953 404 aa5.43□□□□□ -1.54
SNCA-213ENST00000618500 SPRED2Q7Z698 418 aa5.43□□□□□ -1.54
SNCA-213ENST00000618500 AACSQ86V21 672 aa5.43□□□□□ -1.54
SNCA-213ENST00000618500 CRIPAKQ8N1N5 446 aa5.43□□□□□ -1.54
SNCA-213ENST00000618500 CEP95Q96GE4 821 aa5.43□□□□□ -1.54
SNCA-213ENST00000618500 RIPOR3Q96MK2 946 aa5.43□□□□□ -1.54
SNCA-213ENST00000618500 CCDC8Q9H0W5 538 aaPredicted RBP5.43□□□□□ -1.54
SNCA-213ENST00000618500 SLC4A4Q9Y6R1 1079 aa5.43□□□□□ -1.54
SNCA-213ENST00000618500 ABCB11O95342 1321 aa5.43□□□□□ -1.54
SNCA-213ENST00000618500 PRKAB2O43741 272 aa5.43□□□□□ -1.54
SNCA-213ENST00000618500 ORC4O43929 436 aa5.43□□□□□ -1.54
SNCA-213ENST00000618500 SNHG28P0DPA3 235 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms