RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 CYP4F22Q6NT55 531 aa16.22■□□□□ 0.19
COL5A1-208ENST00000618395 PARVGQ9HBI0 331 aa16.22■□□□□ 0.19
COL5A1-208ENST00000618395 RALGAPBQ86X10 1494 aa16.21■□□□□ 0.19
COL5A1-208ENST00000618395 MORF4L2Q15014 288 aa16.21■□□□□ 0.19
COL5A1-208ENST00000618395 CCDC149Q6ZUS6 474 aa16.21■□□□□ 0.19
COL5A1-208ENST00000618395 ANAPC5Q9UJX4 755 aa16.21■□□□□ 0.19
COL5A1-208ENST00000618395 BLOC1S6Q9UL45 172 aa16.21■□□□□ 0.19
COL5A1-208ENST00000618395 L3MBTL1Q9Y468 752 aa16.21■□□□□ 0.19
COL5A1-208ENST00000618395 E7ENQ6 273 aa16.21■□□□□ 0.19
COL5A1-208ENST00000618395 NFIBO00712 420 aa16.21■□□□□ 0.19
COL5A1-208ENST00000618395 PAG1Q9NWQ8 432 aa16.21■□□□□ 0.19
COL5A1-208ENST00000618395 NDUFA13Q9P0J0 144 aa16.21■□□□□ 0.19
COL5A1-208ENST00000618395 STRNO43815 780 aa16.21■□□□□ 0.19
COL5A1-208ENST00000618395 HADHQ16836 314 aaKnown RBP16.21■□□□□ 0.19
COL5A1-208ENST00000618395 ATAD3BQ5T9A4 648 aa16.21■□□□□ 0.19
COL5A1-208ENST00000618395 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.21■□□□□ 0.19
COL5A1-208ENST00000618395 TRIM11Q96F44 468 aa16.21■□□□□ 0.19
COL5A1-208ENST00000618395 NLRP9Q7RTR0 991 aa16.21■□□□□ 0.19
COL5A1-208ENST00000618395 NCOA1Q15788 1441 aa16.21■□□□□ 0.18
COL5A1-208ENST00000618395 LDHCP07864 332 aa16.21■□□□□ 0.18
COL5A1-208ENST00000618395 FANCLQ9NW38 375 aa16.21■□□□□ 0.18
COL5A1-208ENST00000618395 RGL1Q9NZL6 768 aa16.21■□□□□ 0.18
COL5A1-208ENST00000618395 FAM8A1Q9UBU6 413 aa16.21■□□□□ 0.18
COL5A1-208ENST00000618395 NFU1Q9UMS0 254 aa16.21■□□□□ 0.18
COL5A1-208ENST00000618395 FMNL1O95466 1100 aaPredicted RBP16.21■□□□□ 0.18
COL5A1-208ENST00000618395 BRD1O95696 1058 aa16.21■□□□□ 0.18
COL5A1-208ENST00000618395 CXCR5P32302 372 aa16.21■□□□□ 0.18
COL5A1-208ENST00000618395 CORO7P57737 925 aa16.21■□□□□ 0.18
COL5A1-208ENST00000618395 C10orf76Q5T2E6 689 aa16.21■□□□□ 0.18
COL5A1-208ENST00000618395 NAA35Q5VZE5 725 aa16.21■□□□□ 0.18
COL5A1-208ENST00000618395 STX19Q8N4C7 294 aa16.21■□□□□ 0.18
COL5A1-208ENST00000618395 CHMP6Q96FZ7 201 aa16.21■□□□□ 0.18
COL5A1-208ENST00000618395 MRPL44Q9H9J2 332 aaKnown RBP16.21■□□□□ 0.18
COL5A1-208ENST00000618395 SLC4A4Q9Y6R1 1079 aa16.21■□□□□ 0.18
COL5A1-208ENST00000618395 GCNT3O95395 438 aa16.2■□□□□ 0.18
COL5A1-208ENST00000618395 UQCRFS1P1P0C7P4 283 aa16.2■□□□□ 0.18
COL5A1-208ENST00000618395 KRT73Q86Y46 540 aa16.2■□□□□ 0.18
COL5A1-208ENST00000618395 TDRD7Q8NHU6 1098 aaKnown RBP16.2■□□□□ 0.18
COL5A1-208ENST00000618395 NR1H4Q96RI1 486 aaPredicted RBP16.2■□□□□ 0.18
COL5A1-208ENST00000618395 CCDC78A2IDD5 438 aa16.2■□□□□ 0.18
COL5A1-208ENST00000618395 PLS3P13797 630 aa16.2■□□□□ 0.18
COL5A1-208ENST00000618395 HSPA6P17066 643 aa16.2■□□□□ 0.18
COL5A1-208ENST00000618395 HNRNPH1P31943 449 aaKnown RBP16.2■□□□□ 0.18
COL5A1-208ENST00000618395 TNNI2P48788 182 aa16.2■□□□□ 0.18
COL5A1-208ENST00000618395 MYO18AQ92614 2054 aaKnown RBP16.2■□□□□ 0.18
COL5A1-208ENST00000618395 CSRNP1Q96S65 589 aa16.2■□□□□ 0.18
COL5A1-208ENST00000618395 NEUROG2Q9H2A3 272 aa16.2■□□□□ 0.18
COL5A1-208ENST00000618395 SNRKQ9NRH2 765 aa16.2■□□□□ 0.18
COL5A1-208ENST00000618395 C16orf96A6NNT2 1141 aa16.2■□□□□ 0.18
COL5A1-208ENST00000618395 TERB1Q8NA31 727 aa16.2■□□□□ 0.18
COL5A1-208ENST00000618395 DNALI1O14645 258 aaPredicted RBP16.2■□□□□ 0.18
COL5A1-208ENST00000618395 MAGOHP61326 146 aaKnown RBP16.2■□□□□ 0.18
COL5A1-208ENST00000618395 GSTO1P78417 241 aa16.2■□□□□ 0.18
COL5A1-208ENST00000618395 GOLGA8MH3BSY2 632 aa16.2■□□□□ 0.18
COL5A1-208ENST00000618395 TGS1Q96RS0 853 aaKnown RBP16.2■□□□□ 0.18
COL5A1-208ENST00000618395 M0R3G1 203 aa16.19■□□□□ 0.18
COL5A1-208ENST00000618395 RRS1Q15050 365 aaKnown RBP16.19■□□□□ 0.18
COL5A1-208ENST00000618395 PTPROQ16827 1216 aa16.19■□□□□ 0.18
COL5A1-208ENST00000618395 MTBPQ96DY7 904 aa16.19■□□□□ 0.18
COL5A1-208ENST00000618395 PRPF18Q99633 342 aaKnown RBP16.19■□□□□ 0.18
COL5A1-208ENST00000618395 MID2Q9UJV3 735 aa16.19■□□□□ 0.18
COL5A1-208ENST00000618395 ECEL1O95672 775 aa16.19■□□□□ 0.18
COL5A1-208ENST00000618395 GNAT1P11488 350 aa16.19■□□□□ 0.18
COL5A1-208ENST00000618395 RIOK1Q9BRS2 568 aaKnown RBP16.19■□□□□ 0.18
COL5A1-208ENST00000618395 ADNPQ9H2P0 1102 aa16.19■□□□□ 0.18
COL5A1-208ENST00000618395 CPP00450 1065 aa16.19■□□□□ 0.18
COL5A1-208ENST00000618395 NDUFA5Q16718 116 aa16.19■□□□□ 0.18
COL5A1-208ENST00000618395 TTLL7Q6ZT98 887 aa16.19■□□□□ 0.18
COL5A1-208ENST00000618395 RNPEPQ9H4A4 650 aa16.19■□□□□ 0.18
COL5A1-208ENST00000618395 KIF21AQ7Z4S6 1674 aa16.19■□□□□ 0.18
COL5A1-208ENST00000618395 MPP4Q96JB8 637 aa16.19■□□□□ 0.18
COL5A1-208ENST00000618395 IQCB1Q15051 598 aa16.19■□□□□ 0.18
COL5A1-208ENST00000618395 SF3B3Q15393 1217 aaKnown RBP16.19■□□□□ 0.18
COL5A1-208ENST00000618395 KIF19Q2TAC6 998 aa16.19■□□□□ 0.18
COL5A1-208ENST00000618395 SIX5Q8N196 739 aa16.19■□□□□ 0.18
COL5A1-208ENST00000618395 NCOA2Q15596 1464 aa16.19■□□□□ 0.18
COL5A1-208ENST00000618395 ADCK5Q3MIX3 580 aa16.19■□□□□ 0.18
COL5A1-208ENST00000618395 SGO2Q562F6 1265 aa16.19■□□□□ 0.18
COL5A1-208ENST00000618395 KLC3Q6P597 504 aa16.19■□□□□ 0.18
COL5A1-208ENST00000618395 SFMBT1Q9UHJ3 866 aa16.19■□□□□ 0.18
COL5A1-208ENST00000618395 HECW1Q76N89 1606 aa16.19■□□□□ 0.18
COL5A1-208ENST00000618395 PRDM1O75626 825 aa16.19■□□□□ 0.18
COL5A1-208ENST00000618395 STAM2O75886 525 aa16.19■□□□□ 0.18
COL5A1-208ENST00000618395 LETM2Q2VYF4 491 aa16.19■□□□□ 0.18
COL5A1-208ENST00000618395 TTBK2Q6IQ55 1244 aa16.19■□□□□ 0.18
COL5A1-208ENST00000618395 ELMSAN1Q6PJG2 1045 aa16.19■□□□□ 0.18
COL5A1-208ENST00000618395 MCRS1Q96EZ8 462 aa16.19■□□□□ 0.18
COL5A1-208ENST00000618395 BEGAINQ9BUH8 593 aa16.19■□□□□ 0.18
COL5A1-208ENST00000618395 AP4S1Q9Y587 144 aa16.19■□□□□ 0.18
COL5A1-208ENST00000618395 EHBP1L1Q8N3D4 1523 aa16.18■□□□□ 0.18
COL5A1-208ENST00000618395 UBE3AQ05086 875 aa16.18■□□□□ 0.18
COL5A1-208ENST00000618395 GSNP06396 782 aa16.18■□□□□ 0.18
COL5A1-208ENST00000618395 ZSCAN20P17040 1043 aaPredicted RBP16.18■□□□□ 0.18
COL5A1-208ENST00000618395 AHI1Q8N157 1196 aa16.18■□□□□ 0.18
COL5A1-208ENST00000618395 KLHL23Q8NBE8 558 aa16.18■□□□□ 0.18
COL5A1-208ENST00000618395 TRPC7Q9HCX4 862 aa16.18■□□□□ 0.18
COL5A1-208ENST00000618395 TBKBP1A7MCY6 615 aa16.18■□□□□ 0.18
COL5A1-208ENST00000618395 C16orf71Q8IYS4 520 aaPredicted RBP16.18■□□□□ 0.18
COL5A1-208ENST00000618395 SLC12A1Q13621 1099 aa16.18■□□□□ 0.18
COL5A1-208ENST00000618395 TRIM50Q86XT4 487 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms