RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 LRRC41Q15345 812 aa15.31■□□□□ 0.04
CIITA-213ENST00000618327 METTL13Q8N6R0 699 aa15.31■□□□□ 0.04
CIITA-213ENST00000618327 METTL14Q9HCE5 456 aaKnown RBP15.31■□□□□ 0.04
CIITA-213ENST00000618327 H0YCG3 227 aa15.31■□□□□ 0.04
CIITA-213ENST00000618327 GAP43P17677 238 aa15.31■□□□□ 0.04
CIITA-213ENST00000618327 KIAA0753Q2KHM9 967 aa15.31■□□□□ 0.04
CIITA-213ENST00000618327 UTP14CQ5TAP6 766 aaKnown RBP15.31■□□□□ 0.04
CIITA-213ENST00000618327 SFMBT2Q5VUG0 894 aa15.31■□□□□ 0.04
CIITA-213ENST00000618327 DPP9Q86TI2 863 aa15.31■□□□□ 0.04
CIITA-213ENST00000618327 AGBL3Q8NEM8 1001 aa15.31■□□□□ 0.04
CIITA-213ENST00000618327 CNOT6LQ96LI5 555 aaKnown RBP15.31■□□□□ 0.04
CIITA-213ENST00000618327 SUGCTQ9HAC7 445 aa15.31■□□□□ 0.04
CIITA-213ENST00000618327 POTEMA6NI47 508 aa15.31■□□□□ 0.04
CIITA-213ENST00000618327 TMEM110-MUSTN1A8MSY1 372 aa15.31■□□□□ 0.04
CIITA-213ENST00000618327 TROAPQ12815 778 aa15.31■□□□□ 0.04
CIITA-213ENST00000618327 FAM160B1Q5W0V3 765 aa15.31■□□□□ 0.04
CIITA-213ENST00000618327 CAPZA3Q96KX2 299 aa15.31■□□□□ 0.04
CIITA-213ENST00000618327 SALL1Q9NSC2 1324 aa15.31■□□□□ 0.04
CIITA-213ENST00000618327 GSTTP1A0A1W2PQM5 241 aa15.31■□□□□ 0.04
CIITA-213ENST00000618327 NDUFB10O96000 172 aa15.31■□□□□ 0.04
CIITA-213ENST00000618327 PDHBP11177 359 aa15.31■□□□□ 0.04
CIITA-213ENST00000618327 BCRP11274 1271 aa15.31■□□□□ 0.04
CIITA-213ENST00000618327 JAKMIP2Q96AA8 810 aa15.31■□□□□ 0.04
CIITA-213ENST00000618327 MAP3K14Q99558 947 aa15.31■□□□□ 0.04
CIITA-213ENST00000618327 TUBGCP2Q9BSJ2 902 aa15.31■□□□□ 0.04
CIITA-213ENST00000618327 LSM14BQ9BX40 385 aaKnown RBP15.31■□□□□ 0.04
CIITA-213ENST00000618327 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.31■□□□□ 0.04
CIITA-213ENST00000618327 V9GYY5 206 aaPredicted RBP15.31■□□□□ 0.04
CIITA-213ENST00000618327 ABCB11O95342 1321 aa15.31■□□□□ 0.04
CIITA-213ENST00000618327 DLG5Q8TDM6 1919 aa15.3■□□□□ 0.04
CIITA-213ENST00000618327 MAGEA1P43355 309 aa15.3■□□□□ 0.04
CIITA-213ENST00000618327 MTFR1LQ9H019 292 aa15.3■□□□□ 0.04
CIITA-213ENST00000618327 RIC8AQ9NPQ8 531 aa15.3■□□□□ 0.04
CIITA-213ENST00000618327 RRAGDQ9NQL2 400 aaPredicted RBP15.3■□□□□ 0.04
CIITA-213ENST00000618327 STX10O60499 249 aa15.3■□□□□ 0.04
CIITA-213ENST00000618327 EEF1GP26641 437 aaKnown RBP15.3■□□□□ 0.04
CIITA-213ENST00000618327 ATP2C1P98194 919 aaPredicted RBP15.3■□□□□ 0.04
CIITA-213ENST00000618327 KMT5BQ4FZB7 885 aa15.3■□□□□ 0.04
CIITA-213ENST00000618327 CCDC91Q7Z6B0 441 aa15.3■□□□□ 0.04
CIITA-213ENST00000618327 LRRC8AQ8IWT6 810 aa15.3■□□□□ 0.04
CIITA-213ENST00000618327 BCCIPQ9P287 314 aaKnown RBP eCLIP15.3■□□□□ 0.04
CIITA-213ENST00000618327 ABCC6O95255 1503 aa15.3■□□□□ 0.04
CIITA-213ENST00000618327 LIG4P49917 911 aa15.3■□□□□ 0.04
CIITA-213ENST00000618327 SHC4Q6S5L8 630 aa15.3■□□□□ 0.04
CIITA-213ENST00000618327 POTEDQ86YR6 584 aa15.3■□□□□ 0.04
CIITA-213ENST00000618327 CCDC125Q86Z20 511 aa15.3■□□□□ 0.04
CIITA-213ENST00000618327 ZDHHC15Q96MV8 337 aa15.3■□□□□ 0.04
CIITA-213ENST00000618327 RMDN3Q96TC7 470 aa15.3■□□□□ 0.04
CIITA-213ENST00000618327 ARFGAP3Q9NP61 516 aa15.3■□□□□ 0.04
CIITA-213ENST00000618327 MYOZ2Q9NPC6 264 aa15.3■□□□□ 0.04
CIITA-213ENST00000618327 SEPT9Q9UHD8 586 aaPredicted RBP15.3■□□□□ 0.04
CIITA-213ENST00000618327 TNNI1P19237 187 aa15.29■□□□□ 0.04
CIITA-213ENST00000618327 GMPSP49915 693 aaPredicted RBP15.29■□□□□ 0.04
CIITA-213ENST00000618327 ZBTB8OSQ8IWT0 167 aa15.29■□□□□ 0.04
CIITA-213ENST00000618327 MSANTD4Q8NCY6 345 aa15.29■□□□□ 0.04
CIITA-213ENST00000618327 GOLGA1Q92805 767 aa15.29■□□□□ 0.04
CIITA-213ENST00000618327 RWDD2AQ9UIY3 292 aa15.29■□□□□ 0.04
CIITA-213ENST00000618327 SNRNP48Q6IEG0 339 aaKnown RBP15.29■□□□□ 0.04
CIITA-213ENST00000618327 ZNF526Q8TF50 670 aaPredicted RBP15.29■□□□□ 0.04
CIITA-213ENST00000618327 TRIM6Q9C030 488 aaPredicted RBP15.29■□□□□ 0.04
CIITA-213ENST00000618327 CNTNAP5Q8WYK1 1306 aa15.29■□□□□ 0.04
CIITA-213ENST00000618327 NFIAQ12857 509 aa15.29■□□□□ 0.04
CIITA-213ENST00000618327 TYW1BQ6NUM6 668 aa15.29■□□□□ 0.04
CIITA-213ENST00000618327 ARMCX5Q6P1M9 558 aa15.29■□□□□ 0.04
CIITA-213ENST00000618327 ZFP91Q96JP5 570 aaPredicted RBP15.29■□□□□ 0.04
CIITA-213ENST00000618327 FAM20AQ96MK3 541 aa15.29■□□□□ 0.04
CIITA-213ENST00000618327 LMO7Q8WWI1 1683 aa15.29■□□□□ 0.04
CIITA-213ENST00000618327 NR2F2P24468 414 aa15.29■□□□□ 0.04
CIITA-213ENST00000618327 RPS12P25398 132 aaKnown RBP15.29■□□□□ 0.04
CIITA-213ENST00000618327 CDC25BP30305 580 aa15.29■□□□□ 0.04
CIITA-213ENST00000618327 FKBP3Q00688 224 aaKnown RBP15.29■□□□□ 0.04
CIITA-213ENST00000618327 BHMT2Q9H2M3 363 aa15.29■□□□□ 0.04
CIITA-213ENST00000618327 SAMSN1Q9NSI8 373 aaKnown RBP15.29■□□□□ 0.04
CIITA-213ENST00000618327 FAM205CA6NFA0 338 aa15.28■□□□□ 0.04
CIITA-213ENST00000618327 LRRIQ4A6NIV6 560 aa15.28■□□□□ 0.04
CIITA-213ENST00000618327 TDP2O95551 362 aa15.28■□□□□ 0.04
CIITA-213ENST00000618327 CCNE1P24864 410 aa15.28■□□□□ 0.04
CIITA-213ENST00000618327 TGFB2P61812 414 aa15.28■□□□□ 0.04
CIITA-213ENST00000618327 CUL4BQ13620 913 aa15.28■□□□□ 0.04
CIITA-213ENST00000618327 MIS18BP1Q6P0N0 1132 aa15.28■□□□□ 0.04
CIITA-213ENST00000618327 TMEM39BQ9GZU3 492 aa15.28■□□□□ 0.04
CIITA-213ENST00000618327 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.28■□□□□ 0.04
CIITA-213ENST00000618327 RNF146Q9NTX7 359 aa15.28■□□□□ 0.04
CIITA-213ENST00000618327 WTIPA6NIX2 430 aaPredicted RBP15.28■□□□□ 0.04
CIITA-213ENST00000618327 MKRN3Q13064 507 aaKnown RBP15.28■□□□□ 0.04
CIITA-213ENST00000618327 PSMD2Q13200 908 aa15.28■□□□□ 0.04
CIITA-213ENST00000618327 CTTNQ14247 550 aaKnown RBP15.28■□□□□ 0.04
CIITA-213ENST00000618327 BBXQ8WY36 941 aaPredicted RBP15.28■□□□□ 0.04
CIITA-213ENST00000618327 CEP170P1Q96L14 293 aa15.28■□□□□ 0.04
CIITA-213ENST00000618327 PRMT6Q96LA8 375 aaPredicted RBP15.28■□□□□ 0.04
CIITA-213ENST00000618327 NAPGQ99747 312 aaPredicted RBP15.28■□□□□ 0.04
CIITA-213ENST00000618327 ARHGAP44Q17R89 818 aa15.28■□□□□ 0.04
CIITA-213ENST00000618327 GBP6Q6ZN66 633 aa15.28■□□□□ 0.04
CIITA-213ENST00000618327 EEPD1Q7L9B9 569 aa15.28■□□□□ 0.04
CIITA-213ENST00000618327 SLC7A3Q8WY07 619 aa15.28■□□□□ 0.04
CIITA-213ENST00000618327 NRBP1Q9UHY1 535 aa15.28■□□□□ 0.04
CIITA-213ENST00000618327 RIC1Q4ADV7 1423 aa15.28■□□□□ 0.04
CIITA-213ENST00000618327 FAM205AQ6ZU69 1335 aa15.28■□□□□ 0.04
CIITA-213ENST00000618327 FDX1P10109 184 aa15.28■□□□□ 0.04
CIITA-213ENST00000618327 DDIT3P35638 169 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms