RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 PI16Q6UXB8 463 aa12.04□□□□□ -0.48
POLR2A-209ENST00000617998 NELFCDQ8IXH7 590 aa12.04□□□□□ -0.48
POLR2A-209ENST00000617998 AKT1S1Q96B36 256 aa12.04□□□□□ -0.48
POLR2A-209ENST00000617998 CLSTN2Q9H4D0 955 aa12.04□□□□□ -0.48
POLR2A-209ENST00000617998 DACT1Q9NYF0 836 aa12.04□□□□□ -0.48
POLR2A-209ENST00000617998 GGPS1O95749 300 aa12.04□□□□□ -0.48
POLR2A-209ENST00000617998 CYBBP04839 570 aa12.04□□□□□ -0.48
POLR2A-209ENST00000617998 PKN2Q16513 984 aaKnown RBP12.04□□□□□ -0.48
POLR2A-209ENST00000617998 AFG1LQ8WV93 481 aa12.04□□□□□ -0.48
POLR2A-209ENST00000617998 FAM149B1Q96BN6 582 aa12.04□□□□□ -0.48
POLR2A-209ENST00000617998 K7ERI5 159 aa12.03□□□□□ -0.48
POLR2A-209ENST00000617998 TSTA3Q13630 321 aaPredicted RBP12.03□□□□□ -0.48
POLR2A-209ENST00000617998 MAP10Q9P2G4 905 aa12.03□□□□□ -0.48
POLR2A-209ENST00000617998 C2CD2LO14523 706 aa12.03□□□□□ -0.48
POLR2A-209ENST00000617998 HSPA1AP0DMV8 641 aaKnown RBP12.03□□□□□ -0.48
POLR2A-209ENST00000617998 HSPA1BP0DMV9 641 aaKnown RBP12.03□□□□□ -0.48
POLR2A-209ENST00000617998 NDUFV1P49821 464 aa12.03□□□□□ -0.48
POLR2A-209ENST00000617998 NDUFAF2Q8N183 169 aa12.03□□□□□ -0.48
POLR2A-209ENST00000617998 SMARCAD1Q9H4L7 1026 aa12.03□□□□□ -0.48
POLR2A-209ENST00000617998 GDAQ9Y2T3 454 aa12.03□□□□□ -0.48
POLR2A-209ENST00000617998 SPDYE2BA6NHP3 402 aa12.03□□□□□ -0.48
POLR2A-209ENST00000617998 NTSR2O95665 410 aa12.03□□□□□ -0.48
POLR2A-209ENST00000617998 SPDYE6P0CI01 402 aa12.03□□□□□ -0.48
POLR2A-209ENST00000617998 CYP2C9P11712 490 aa12.03□□□□□ -0.48
POLR2A-209ENST00000617998 OR1G1P47890 313 aa12.03□□□□□ -0.48
POLR2A-209ENST00000617998 ST8SIA6P61647 398 aa12.03□□□□□ -0.48
POLR2A-209ENST00000617998 MAPK6Q16659 721 aa12.03□□□□□ -0.48
POLR2A-209ENST00000617998 DDX53Q86TM3 631 aaKnown RBP12.03□□□□□ -0.48
POLR2A-209ENST00000617998 RAB3IL1Q8TBN0 382 aa12.03□□□□□ -0.48
POLR2A-209ENST00000617998 COL4A3BPQ9Y5P4 624 aa12.03□□□□□ -0.48
POLR2A-209ENST00000617998 SLC27A2O14975 620 aa12.03□□□□□ -0.48
POLR2A-209ENST00000617998 PIK3CAP42336 1068 aa12.03□□□□□ -0.48
POLR2A-209ENST00000617998 CUL4BQ13620 913 aa12.03□□□□□ -0.48
POLR2A-209ENST00000617998 PRMT6Q96LA8 375 aaPredicted RBP12.03□□□□□ -0.48
POLR2A-209ENST00000617998 KCNJ14Q9UNX9 436 aa12.03□□□□□ -0.48
POLR2A-209ENST00000617998 E7EWF7 191 aa12.03□□□□□ -0.48
POLR2A-209ENST00000617998 PRMT2P55345 433 aa12.03□□□□□ -0.48
POLR2A-209ENST00000617998 PPP2R3AQ06190 1150 aa12.03□□□□□ -0.48
POLR2A-209ENST00000617998 SIX6OS1Q8N1H7 587 aa12.03□□□□□ -0.48
POLR2A-209ENST00000617998 BEST2Q8NFU1 509 aa12.03□□□□□ -0.48
POLR2A-209ENST00000617998 TTC14Q96N46 770 aa12.03□□□□□ -0.48
POLR2A-209ENST00000617998 PPATQ06203 517 aa12.03□□□□□ -0.48
POLR2A-209ENST00000617998 LAMC2Q13753 1193 aa12.03□□□□□ -0.48
POLR2A-209ENST00000617998 SCYL2Q6P3W7 929 aa12.03□□□□□ -0.48
POLR2A-209ENST00000617998 CCDC84Q86UT8 332 aaPredicted RBP12.03□□□□□ -0.48
POLR2A-209ENST00000617998 C1orf112Q9NSG2 853 aa12.03□□□□□ -0.48
POLR2A-209ENST00000617998 TBC1D22BQ9NU19 505 aa12.03□□□□□ -0.48
POLR2A-209ENST00000617998 MED23Q9ULK4 1368 aa12.03□□□□□ -0.48
POLR2A-209ENST00000617998 MROH7Q68CQ1 1323 aa12.02□□□□□ -0.48
POLR2A-209ENST00000617998 TNS2Q63HR2 1409 aa12.02□□□□□ -0.48
POLR2A-209ENST00000617998 HUS1O60921 280 aa12.02□□□□□ -0.48
POLR2A-209ENST00000617998 HSPA6P17066 643 aa12.02□□□□□ -0.48
POLR2A-209ENST00000617998 ERCC3P19447 782 aa12.02□□□□□ -0.48
POLR2A-209ENST00000617998 ENGASEQ8NFI3 743 aa12.02□□□□□ -0.48
POLR2A-209ENST00000617998 SPATA31E1Q6ZUB1 1445 aa12.02□□□□□ -0.48
POLR2A-209ENST00000617998 FGAP02671 866 aa12.02□□□□□ -0.48
POLR2A-209ENST00000617998 URODP06132 367 aa12.02□□□□□ -0.48
POLR2A-209ENST00000617998 SFSWAPQ12872 951 aaKnown RBP12.02□□□□□ -0.48
POLR2A-209ENST00000617998 BAATQ14032 418 aaPredicted RBP12.02□□□□□ -0.48
POLR2A-209ENST00000617998 TAF3Q5VWG9 929 aa12.02□□□□□ -0.48
POLR2A-209ENST00000617998 PDZD4Q76G19 769 aaPredicted RBP12.02□□□□□ -0.48
POLR2A-209ENST00000617998 CEP68Q76N32 757 aa12.02□□□□□ -0.48
POLR2A-209ENST00000617998 CCDC127Q96BQ5 260 aa12.02□□□□□ -0.48
POLR2A-209ENST00000617998 ARGLU1Q9NWB6 273 aaPredicted RBP12.02□□□□□ -0.48
POLR2A-209ENST00000617998 MOCS3O95396 460 aa12.02□□□□□ -0.49
POLR2A-209ENST00000617998 STAMBPO95630 424 aa12.02□□□□□ -0.49
POLR2A-209ENST00000617998 TNFAIP3P21580 790 aa12.02□□□□□ -0.49
POLR2A-209ENST00000617998 SLAIN1Q8ND83 568 aa12.02□□□□□ -0.49
POLR2A-209ENST00000617998 SKA2Q8WVK7 121 aaPredicted RBP12.02□□□□□ -0.49
POLR2A-209ENST00000617998 SKIP12755 728 aa12.02□□□□□ -0.49
POLR2A-209ENST00000617998 KRT76Q01546 638 aa12.02□□□□□ -0.49
POLR2A-209ENST00000617998 IKBKEQ14164 716 aa12.02□□□□□ -0.49
POLR2A-209ENST00000617998 ZFP91Q96JP5 570 aaPredicted RBP12.02□□□□□ -0.49
POLR2A-209ENST00000617998 LSM7Q9UK45 103 aaKnown RBP12.02□□□□□ -0.49
POLR2A-209ENST00000617998 CHMLP26374 656 aa12.01□□□□□ -0.49
POLR2A-209ENST00000617998 MYL7Q01449 175 aa12.01□□□□□ -0.49
POLR2A-209ENST00000617998 SURF1Q15526 300 aa12.01□□□□□ -0.49
POLR2A-209ENST00000617998 HEXIM1O94992 359 aaKnown RBP12.01□□□□□ -0.49
POLR2A-209ENST00000617998 ACCSLQ4AC99 568 aa12.01□□□□□ -0.49
POLR2A-209ENST00000617998 COLEC11Q9BWP8 271 aa12.01□□□□□ -0.49
POLR2A-209ENST00000617998 RRN3P2A6NIE6 340 aa12.01□□□□□ -0.49
POLR2A-209ENST00000617998 CYP2C8P10632 490 aa12.01□□□□□ -0.49
POLR2A-209ENST00000617998 RPS6KB1P23443 525 aa12.01□□□□□ -0.49
POLR2A-209ENST00000617998 PAFAH1B1P43034 410 aa12.01□□□□□ -0.49
POLR2A-209ENST00000617998 AAK1Q2M2I8 961 aa12.01□□□□□ -0.49
POLR2A-209ENST00000617998 ZNF697Q5TEC3 545 aa12.01□□□□□ -0.49
POLR2A-209ENST00000617998 CACYBPQ9HB71 228 aaKnown RBP12.01□□□□□ -0.49
POLR2A-209ENST00000617998 STRNO43815 780 aa12.01□□□□□ -0.49
POLR2A-209ENST00000617998 KPNA1P52294 538 aaPredicted RBP12.01□□□□□ -0.49
POLR2A-209ENST00000617998 PTPN12Q05209 780 aaKnown RBP12.01□□□□□ -0.49
POLR2A-209ENST00000617998 KIAA0753Q2KHM9 967 aa12.01□□□□□ -0.49
POLR2A-209ENST00000617998 SWSAP1Q6NVH7 229 aa12.01□□□□□ -0.49
POLR2A-209ENST00000617998 PGBD1Q96JS3 809 aa12.01□□□□□ -0.49
POLR2A-209ENST00000617998 ZNF668Q96K58 619 aaPredicted RBP12.01□□□□□ -0.49
POLR2A-209ENST00000617998 BCRP11274 1271 aa12.01□□□□□ -0.49
POLR2A-209ENST00000617998 ALDH1A3P47895 512 aa12.01□□□□□ -0.49
POLR2A-209ENST00000617998 TMEM132BQ14DG7 1078 aa12.01□□□□□ -0.49
POLR2A-209ENST00000617998 C2orf40Q9H1Z8 148 aa12.01□□□□□ -0.49
POLR2A-209ENST00000617998 PIH1D3Q9NQM4 214 aaKnown RBP12.01□□□□□ -0.49
POLR2A-209ENST00000617998 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms