RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 GH1P01241 217 aa25.78■■□□□ 1.72
NEDD4L-237ENST00000617539 NFRKBQ6P4R8 1299 aa25.78■■□□□ 1.72
NEDD4L-237ENST00000617539 HERVK_113Q902F9 699 aa25.78■■□□□ 1.72
NEDD4L-237ENST00000617539 SCLYQ96I15 445 aa25.78■■□□□ 1.72
NEDD4L-237ENST00000617539 MAP3K20Q9NYL2 800 aaKnown RBP25.78■■□□□ 1.72
NEDD4L-237ENST00000617539 TMEM265A0A087WTH1 108 aa25.77■■□□□ 1.72
NEDD4L-237ENST00000617539 PNMA6FA0A0J9YX94 578 aa25.77■■□□□ 1.72
NEDD4L-237ENST00000617539 PRC1O43663 620 aa25.77■■□□□ 1.72
NEDD4L-237ENST00000617539 PBX2P40425 430 aa25.77■■□□□ 1.72
NEDD4L-237ENST00000617539 FAM47CQ5HY64 1035 aa25.77■■□□□ 1.72
NEDD4L-237ENST00000617539 ZNF654Q8IZM8 581 aa25.77■■□□□ 1.72
NEDD4L-237ENST00000617539 MYLIPQ8WY64 445 aa25.77■■□□□ 1.72
NEDD4L-237ENST00000617539 SUPT20HL2P0C7V6 817 aa25.76■■□□□ 1.71
NEDD4L-237ENST00000617539 PGM5Q15124 567 aa25.76■■□□□ 1.71
NEDD4L-237ENST00000617539 NECTIN1Q15223 517 aa25.76■■□□□ 1.71
NEDD4L-237ENST00000617539 SAMD3Q8N6K7 520 aa25.76■■□□□ 1.71
NEDD4L-237ENST00000617539 KAT2BQ92831 832 aa25.76■■□□□ 1.71
NEDD4L-237ENST00000617539 EMID1Q96A84 441 aaPredicted RBP25.76■■□□□ 1.71
NEDD4L-237ENST00000617539 SH2B2O14492 632 aaPredicted RBP25.75■■□□□ 1.71
NEDD4L-237ENST00000617539 BMP2KLQ5H9B9 411 aa25.75■■□□□ 1.71
NEDD4L-237ENST00000617539 CREB3L3Q68CJ9 461 aa25.75■■□□□ 1.71
NEDD4L-237ENST00000617539 CENPQQ7L2Z9 268 aaPredicted RBP25.75■■□□□ 1.71
NEDD4L-237ENST00000617539 VSIG10LQ86VR7 867 aa25.75■■□□□ 1.71
NEDD4L-237ENST00000617539 PIBF1Q8WXW3 757 aa25.75■■□□□ 1.71
NEDD4L-237ENST00000617539 CTAGE1Q96RT6 745 aa25.75■■□□□ 1.71
NEDD4L-237ENST00000617539 MAP3K14Q99558 947 aa25.75■■□□□ 1.71
NEDD4L-237ENST00000617539 MTA3Q9BTC8 594 aa25.75■■□□□ 1.71
NEDD4L-237ENST00000617539 PBX4Q9BYU1 374 aa25.75■■□□□ 1.71
NEDD4L-237ENST00000617539 MRVI1Q9Y6F6 885 aa25.75■■□□□ 1.71
NEDD4L-237ENST00000617539 GCOM1H8Y6P7 765 aaPredicted RBP25.74■■□□□ 1.71
NEDD4L-237ENST00000617539 DDAH1O94760 285 aa25.74■■□□□ 1.71
NEDD4L-237ENST00000617539 FGBP02675 491 aa25.74■■□□□ 1.71
NEDD4L-237ENST00000617539 POLR2MP0CAP2 368 aa25.74■■□□□ 1.71
NEDD4L-237ENST00000617539 MYCLP12524 364 aaPredicted RBP25.74■■□□□ 1.71
NEDD4L-237ENST00000617539 PTPN11Q06124 597 aaPredicted RBP25.74■■□□□ 1.71
NEDD4L-237ENST00000617539 OTOP2Q7RTS6 562 aa25.74■■□□□ 1.71
NEDD4L-237ENST00000617539 ZFP91Q96JP5 570 aaPredicted RBP25.74■■□□□ 1.71
NEDD4L-237ENST00000617539 SPZ1Q9BXG8 430 aa25.74■■□□□ 1.71
NEDD4L-237ENST00000617539 TRIP12Q14669 1992 aaPredicted RBP25.73■■□□□ 1.71
NEDD4L-237ENST00000617539 MCM5P33992 734 aa25.73■■□□□ 1.71
NEDD4L-237ENST00000617539 TRAF1Q13077 416 aa25.73■■□□□ 1.71
NEDD4L-237ENST00000617539 GRIN2CQ14957 1233 aa25.73■■□□□ 1.71
NEDD4L-237ENST00000617539 FCHSD1Q86WN1 690 aa25.73■■□□□ 1.71
NEDD4L-237ENST00000617539 TIFAQ96CG3 184 aa25.73■■□□□ 1.71
NEDD4L-237ENST00000617539 ANO2Q9NQ90 1003 aa25.73■■□□□ 1.71
NEDD4L-237ENST00000617539 FRMPD4Q14CM0 1322 aa25.72■■□□□ 1.71
NEDD4L-237ENST00000617539 PLEKHA8P1O95397 391 aa25.72■■□□□ 1.71
NEDD4L-237ENST00000617539 CHMP4BP1P59074 171 aa25.72■■□□□ 1.71
NEDD4L-237ENST00000617539 CASC1Q6TDU7 716 aa25.72■■□□□ 1.71
NEDD4L-237ENST00000617539 GPKOWQ92917 476 aaPredicted RBP eCLIP25.72■■□□□ 1.71
NEDD4L-237ENST00000617539 DOCK5Q9H7D0 1870 aa25.72■■□□□ 1.71
NEDD4L-237ENST00000617539 RXRAP19793 462 aa25.71■■□□□ 1.71
NEDD4L-237ENST00000617539 SP2Q02086 613 aa25.71■■□□□ 1.71
NEDD4L-237ENST00000617539 GDF6Q6KF10 455 aaPredicted RBP25.71■■□□□ 1.71
NEDD4L-237ENST00000617539 SESTD1Q86VW0 696 aa25.71■■□□□ 1.71
NEDD4L-237ENST00000617539 PPTC7Q8NI37 304 aa25.71■■□□□ 1.71
NEDD4L-237ENST00000617539 CTCFLQ8NI51 663 aaPredicted RBP25.71■■□□□ 1.71
NEDD4L-237ENST00000617539 TMEM87BQ96K49 555 aa25.71■■□□□ 1.71
NEDD4L-237ENST00000617539 ZNF576Q9H609 170 aa25.71■■□□□ 1.71
NEDD4L-237ENST00000617539 TET1Q8NFU7 2136 aa25.7■■□□□ 1.71
NEDD4L-237ENST00000617539 PITPNM1O00562 1244 aa25.7■■□□□ 1.7
NEDD4L-237ENST00000617539 HOXD8P13378 290 aaPredicted RBP25.7■■□□□ 1.7
NEDD4L-237ENST00000617539 LAMC2Q13753 1193 aa25.7■■□□□ 1.7
NEDD4L-237ENST00000617539 DGKDQ16760 1214 aa25.7■■□□□ 1.7
NEDD4L-237ENST00000617539 MYSM1Q5VVJ2 828 aa25.7■■□□□ 1.7
NEDD4L-237ENST00000617539 RPUSD2Q8IZ73 545 aaKnown RBP25.7■■□□□ 1.7
NEDD4L-237ENST00000617539 SRBD1Q8N5C6 995 aaKnown RBP25.7■■□□□ 1.7
NEDD4L-237ENST00000617539 LRRC2Q9BYS8 371 aa25.7■■□□□ 1.7
NEDD4L-237ENST00000617539 SORBS3O60504 671 aa25.69■■□□□ 1.7
NEDD4L-237ENST00000617539 F2P00734 622 aa25.69■■□□□ 1.7
NEDD4L-237ENST00000617539 ZNF286BP0CG31 522 aa25.69■■□□□ 1.7
NEDD4L-237ENST00000617539 CASTP20810 708 aaKnown RBP25.69■■□□□ 1.7
NEDD4L-237ENST00000617539 UBA1P22314 1058 aaKnown RBP25.69■■□□□ 1.7
NEDD4L-237ENST00000617539 SMARCA1P28370 1054 aa25.69■■□□□ 1.7
NEDD4L-237ENST00000617539 CCND2P30279 289 aa25.69■■□□□ 1.7
NEDD4L-237ENST00000617539 KIF5BP33176 963 aa25.69■■□□□ 1.7
NEDD4L-237ENST00000617539 LIFRP42702 1097 aa25.69■■□□□ 1.7
NEDD4L-237ENST00000617539 MRPS9P82933 396 aaKnown RBP25.69■■□□□ 1.7
NEDD4L-237ENST00000617539 HSDL1Q3SXM5 330 aa25.69■■□□□ 1.7
NEDD4L-237ENST00000617539 CELF3Q5SZQ8 465 aaKnown RBP25.69■■□□□ 1.7
NEDD4L-237ENST00000617539 NFXL1Q6ZNB6 911 aa25.69■■□□□ 1.7
NEDD4L-237ENST00000617539 RAB11FIP4Q86YS3 637 aa25.69■■□□□ 1.7
NEDD4L-237ENST00000617539 DHX37Q8IY37 1157 aaKnown RBP25.69■■□□□ 1.7
NEDD4L-237ENST00000617539 CMTR1Q8N1G2 835 aaKnown RBP25.69■■□□□ 1.7
NEDD4L-237ENST00000617539 MAFAQ8NHW3 353 aaPredicted RBP25.69■■□□□ 1.7
NEDD4L-237ENST00000617539 HAS3O00219 553 aa25.68■■□□□ 1.7
NEDD4L-237ENST00000617539 GGPS1O95749 300 aa25.68■■□□□ 1.7
NEDD4L-237ENST00000617539 IQCF3P0C7M6 154 aa25.68■■□□□ 1.7
NEDD4L-237ENST00000617539 FOSL2P15408 326 aa25.68■■□□□ 1.7
NEDD4L-237ENST00000617539 PTGISQ16647 500 aa25.68■■□□□ 1.7
NEDD4L-237ENST00000617539 DEFB128Q7Z7B8 93 aa25.68■■□□□ 1.7
NEDD4L-237ENST00000617539 TMTC2Q8N394 836 aa25.68■■□□□ 1.7
NEDD4L-237ENST00000617539 DHX38Q92620 1227 aaKnown RBP25.68■■□□□ 1.7
NEDD4L-237ENST00000617539 RRP36Q96EU6 259 aaKnown RBP25.68■■□□□ 1.7
NEDD4L-237ENST00000617539 MTIF3Q9H2K0 278 aaKnown RBP25.68■■□□□ 1.7
NEDD4L-237ENST00000617539 BCAS3Q9H6U6 928 aa25.68■■□□□ 1.7
NEDD4L-237ENST00000617539 YBX2Q9Y2T7 364 aaKnown RBP25.68■■□□□ 1.7
NEDD4L-237ENST00000617539 REV3LO60673 3130 aa25.68■■□□□ 1.7
NEDD4L-237ENST00000617539 CCDC69A6NI79 296 aa25.67■■□□□ 1.7
NEDD4L-237ENST00000617539 PSEN2P49810 448 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms