RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 SLU7O95391 586 aaKnown RBP11.15□□□□□ -0.62
SMARCA1-205ENST00000617310 NDUFB10O96000 172 aa11.15□□□□□ -0.62
SMARCA1-205ENST00000617310 PEX3P56589 373 aa11.15□□□□□ -0.62
SMARCA1-205ENST00000617310 RASSF7Q02833 373 aa11.15□□□□□ -0.62
SMARCA1-205ENST00000617310 ADAT2Q7Z6V5 191 aaKnown RBP11.15□□□□□ -0.62
SMARCA1-205ENST00000617310 C7orf31Q8N865 590 aa11.15□□□□□ -0.62
SMARCA1-205ENST00000617310 KAZALD1Q96I82 304 aa11.15□□□□□ -0.62
SMARCA1-205ENST00000617310 IL25Q9H293 177 aa11.15□□□□□ -0.62
SMARCA1-205ENST00000617310 ARFGAP3Q9NP61 516 aa11.15□□□□□ -0.62
SMARCA1-205ENST00000617310 IFNB1P01574 187 aa11.15□□□□□ -0.63
SMARCA1-205ENST00000617310 PLA2G4BP0C869 781 aa11.15□□□□□ -0.63
SMARCA1-205ENST00000617310 VPS41P49754 854 aa11.15□□□□□ -0.63
SMARCA1-205ENST00000617310 TAF1CQ15572 869 aaPredicted RBP11.15□□□□□ -0.63
SMARCA1-205ENST00000617310 UAP1Q16222 522 aaPredicted RBP11.15□□□□□ -0.63
SMARCA1-205ENST00000617310 MIS18BP1Q6P0N0 1132 aa11.15□□□□□ -0.63
SMARCA1-205ENST00000617310 KLHL7Q8IXQ5 586 aa11.15□□□□□ -0.63
SMARCA1-205ENST00000617310 HINFPQ9BQA5 517 aa11.15□□□□□ -0.63
SMARCA1-205ENST00000617310 IFIH1Q9BYX4 1025 aaKnown RBP11.15□□□□□ -0.63
SMARCA1-205ENST00000617310 IQCGQ9H095 443 aaKnown RBP11.15□□□□□ -0.63
SMARCA1-205ENST00000617310 RASAL2Q9UJF2 1139 aa11.15□□□□□ -0.63
SMARCA1-205ENST00000617310 MTUS1Q9ULD2 1270 aa11.15□□□□□ -0.63
SMARCA1-205ENST00000617310 TDP2O95551 362 aa11.14□□□□□ -0.63
SMARCA1-205ENST00000617310 RFX5P48382 616 aaPredicted RBP11.14□□□□□ -0.63
SMARCA1-205ENST00000617310 ZNF157P51786 506 aaPredicted RBP11.14□□□□□ -0.63
SMARCA1-205ENST00000617310 ZNF445P59923 1031 aa11.14□□□□□ -0.63
SMARCA1-205ENST00000617310 RESTQ13127 1097 aa11.14□□□□□ -0.63
SMARCA1-205ENST00000617310 GAS2L3Q86XJ1 694 aa11.14□□□□□ -0.63
SMARCA1-205ENST00000617310 FAM149B1Q96BN6 582 aa11.14□□□□□ -0.63
SMARCA1-205ENST00000617310 CNOT6LQ96LI5 555 aaKnown RBP11.14□□□□□ -0.63
SMARCA1-205ENST00000617310 DISC1Q9NRI5 854 aa11.14□□□□□ -0.63
SMARCA1-205ENST00000617310 PLEKHG2Q9H7P9 1386 aa11.14□□□□□ -0.63
SMARCA1-205ENST00000617310 TNPO2O14787 897 aaKnown RBP11.14□□□□□ -0.63
SMARCA1-205ENST00000617310 CAPN9O14815 690 aa11.14□□□□□ -0.63
SMARCA1-205ENST00000617310 LPXNO60711 386 aa11.14□□□□□ -0.63
SMARCA1-205ENST00000617310 MYL3P08590 195 aa11.14□□□□□ -0.63
SMARCA1-205ENST00000617310 MRPS9P82933 396 aaKnown RBP11.14□□□□□ -0.63
SMARCA1-205ENST00000617310 LACTBP83111 547 aaPredicted RBP11.14□□□□□ -0.63
SMARCA1-205ENST00000617310 CALCOCO2Q13137 446 aa11.14□□□□□ -0.63
SMARCA1-205ENST00000617310 GBP6Q6ZN66 633 aa11.14□□□□□ -0.63
SMARCA1-205ENST00000617310 CCDC63Q8NA47 563 aa11.14□□□□□ -0.63
SMARCA1-205ENST00000617310 SLC16A10Q8TF71 515 aa11.14□□□□□ -0.63
SMARCA1-205ENST00000617310 PRMT6Q96LA8 375 aaPredicted RBP11.14□□□□□ -0.63
SMARCA1-205ENST00000617310 SENP2Q9HC62 589 aa11.14□□□□□ -0.63
SMARCA1-205ENST00000617310 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.14□□□□□ -0.63
SMARCA1-205ENST00000617310 ATP2A1O14983 1001 aa11.14□□□□□ -0.63
SMARCA1-205ENST00000617310 C9orf131Q5VYM1 1079 aa11.14□□□□□ -0.63
SMARCA1-205ENST00000617310 LDHDQ86WU2 507 aa11.14□□□□□ -0.63
SMARCA1-205ENST00000617310 RETREG2Q8NC44 543 aa11.14□□□□□ -0.63
SMARCA1-205ENST00000617310 FBXO28Q9NVF7 368 aa11.14□□□□□ -0.63
SMARCA1-205ENST00000617310 RCOR1Q9UKL0 485 aa11.14□□□□□ -0.63
SMARCA1-205ENST00000617310 SSX2IPQ9Y2D8 614 aa11.14□□□□□ -0.63
SMARCA1-205ENST00000617310 UBE2Q2LH0YL09 131 aa11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 SLFN14P0C7P3 912 aa11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 OR8K1Q8NGG5 319 aa11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 PLCD4Q9BRC7 762 aa11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 TUBGCP2Q9BSJ2 902 aa11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 TXNDC16Q9P2K2 825 aa11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 HERC5Q9UII4 1024 aaKnown RBP11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 HACL1Q9UJ83 578 aa11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 NCOA3Q9Y6Q9 1424 aa11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 DLC1Q96QB1 1528 aa11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 FAM205CA6NFA0 338 aa11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 WTIPA6NIX2 430 aaPredicted RBP11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 E7EVH7 732 aa11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 E9PMD0 336 aa11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 BUB1O43683 1085 aa11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 STXBP2Q15833 593 aa11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 PFKFB3Q16875 520 aaPredicted RBP11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 C11orf57Q6ZUT1 292 aaPredicted RBP11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 FBXO33Q7Z6M2 555 aa11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 PHLDB2Q86SQ0 1253 aa11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 CCDC155Q8N6L0 562 aa11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 CEP112Q8N8E3 955 aa11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 IPO4Q8TEX9 1081 aaKnown RBP11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 DCAF4Q8WV16 495 aa11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 ZKSCAN4Q969J2 545 aaPredicted RBP11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 TSNARE1Q96NA8 513 aa11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 MYOZ2Q9NPC6 264 aa11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 HESX1Q9UBX0 185 aa11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 INPP5FQ9Y2H2 1132 aa11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 GDAQ9Y2T3 454 aa11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 NRXN1Q9ULB1 1477 aa11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 MROH2AA6NES4 1674 aa11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 A0A1W2PQ27 194 aa11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 A0A1W2PQ64 194 aa11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 A0A1W2PQD8 194 aa11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 POTEB3A0JP26 581 aa11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 POTECB2RU33 542 aa11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 CD58P19256 250 aa11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 TRIM14Q14142 442 aa11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 EXOC3L4Q17RC7 722 aa11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 POTEBQ6S5H4 581 aa11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 TMTC1Q8IUR5 882 aa11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 FAM186BQ8IYM0 893 aa11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 NSUN6Q8TEA1 469 aaKnown RBP11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 SECISBP2LQ93073 1101 aaKnown RBP11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 GDAP1L1Q96MZ0 367 aa11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 NUP58Q9BVL2 599 aa11.13□□□□□ -0.63
SMARCA1-205ENST00000617310 EPB41L4AQ9HCS5 686 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms