RNA–Protein interactions for RNA: ENST00000616237.1

LHX1-202, Transcript of LIM homeobox 1, humanhuman

TSL 1 (best)

Gene LHX1, Length 1,364 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1-202ENST00000616237 ANKRD33Q7Z3H0 272 aa19.62■□□□□ 0.73
LHX1-202ENST00000616237 HEATR3Q7Z4Q2 680 aa19.62■□□□□ 0.73
LHX1-202ENST00000616237 DDX41Q9UJV9 622 aaKnown RBP19.62■□□□□ 0.73
LHX1-202ENST00000616237 CYP46A1Q9Y6A2 500 aa19.62■□□□□ 0.73
LHX1-202ENST00000616237 TRIM43BA6NCK2 446 aa19.61■□□□□ 0.73
LHX1-202ENST00000616237 PQBP1O60828 265 aaKnown RBP19.61■□□□□ 0.73
LHX1-202ENST00000616237 PDIA3P30101 505 aaKnown RBP19.61■□□□□ 0.73
LHX1-202ENST00000616237 MRPS9P82933 396 aaKnown RBP19.61■□□□□ 0.73
LHX1-202ENST00000616237 ARHGAP1Q07960 439 aa19.61■□□□□ 0.73
LHX1-202ENST00000616237 TRIM43Q96BQ3 446 aaPredicted RBP19.61■□□□□ 0.73
LHX1-202ENST00000616237 LARP6Q9BRS8 491 aaKnown RBP19.61■□□□□ 0.73
LHX1-202ENST00000616237 PSTPIP2Q9H939 334 aa19.61■□□□□ 0.73
LHX1-202ENST00000616237 A6NJR5 290 aa19.6■□□□□ 0.73
LHX1-202ENST00000616237 ARVCFO00192 962 aa19.6■□□□□ 0.73
LHX1-202ENST00000616237 ITGB8P26012 769 aa19.6■□□□□ 0.73
LHX1-202ENST00000616237 PSMC6P62333 389 aa19.6■□□□□ 0.73
LHX1-202ENST00000616237 MDM2Q00987 491 aaPredicted RBP19.6■□□□□ 0.73
LHX1-202ENST00000616237 FAAP100Q0VG06 881 aa19.6■□□□□ 0.73
LHX1-202ENST00000616237 NTRK3Q16288 839 aa19.6■□□□□ 0.73
LHX1-202ENST00000616237 UBE2SQ16763 222 aa19.6■□□□□ 0.73
LHX1-202ENST00000616237 SLC43A3Q8NBI5 491 aa19.6■□□□□ 0.73
LHX1-202ENST00000616237 SMARCC2Q8TAQ2 1214 aa19.6■□□□□ 0.73
LHX1-202ENST00000616237 VTI1AQ96AJ9 217 aa19.6■□□□□ 0.73
LHX1-202ENST00000616237 PRDM5Q9NQX1 630 aaPredicted RBP19.6■□□□□ 0.73
LHX1-202ENST00000616237 LAMA3Q16787 3333 aa19.6■□□□□ 0.73
LHX1-202ENST00000616237 A0A0U1RQG5 324 aaPredicted RBP19.59■□□□□ 0.73
LHX1-202ENST00000616237 STXBP3O00186 592 aa19.59■□□□□ 0.73
LHX1-202ENST00000616237 ZEB2O60315 1214 aa19.59■□□□□ 0.73
LHX1-202ENST00000616237 CCND2P30279 289 aa19.59■□□□□ 0.73
LHX1-202ENST00000616237 PURAQ00577 322 aaKnown RBP19.59■□□□□ 0.73
LHX1-202ENST00000616237 TOX2Q96NM4 488 aa19.59■□□□□ 0.73
LHX1-202ENST00000616237 NCOA5Q9HCD5 579 aaKnown RBP19.59■□□□□ 0.73
LHX1-202ENST00000616237 MRVI1Q9Y6F6 885 aa19.59■□□□□ 0.73
LHX1-202ENST00000616237 CCDC196A0A1B0GTZ2 297 aa19.58■□□□□ 0.73
LHX1-202ENST00000616237 PPFIA3O75145 1194 aa19.58■□□□□ 0.73
LHX1-202ENST00000616237 CABYRO75952 493 aa19.58■□□□□ 0.73
LHX1-202ENST00000616237 GH1P01241 217 aa19.58■□□□□ 0.73
LHX1-202ENST00000616237 CLTBP09497 229 aa19.58■□□□□ 0.73
LHX1-202ENST00000616237 BMP8BP34820 402 aa19.58■□□□□ 0.73
LHX1-202ENST00000616237 CPT1AP50416 773 aa19.58■□□□□ 0.73
LHX1-202ENST00000616237 CCT2P78371 535 aaKnown RBP19.58■□□□□ 0.73
LHX1-202ENST00000616237 SP2Q02086 613 aa19.58■□□□□ 0.73
LHX1-202ENST00000616237 PKN1Q16512 942 aa19.58■□□□□ 0.73
LHX1-202ENST00000616237 FAM126BQ8IXS8 530 aa19.58■□□□□ 0.73
LHX1-202ENST00000616237 AFG1LQ8WV93 481 aa19.58■□□□□ 0.73
LHX1-202ENST00000616237 CUL5Q93034 780 aa19.58■□□□□ 0.73
LHX1-202ENST00000616237 LTBP2Q14767 1821 aa19.58■□□□□ 0.73
LHX1-202ENST00000616237 MYL3P08590 195 aa19.57■□□□□ 0.72
LHX1-202ENST00000616237 NAPAP54920 295 aa19.57■□□□□ 0.72
LHX1-202ENST00000616237 ANAPC15P60006 121 aa19.57■□□□□ 0.72
LHX1-202ENST00000616237 SEMA3FQ13275 785 aa19.57■□□□□ 0.72
LHX1-202ENST00000616237 ITGA7Q13683 1181 aa19.57■□□□□ 0.72
LHX1-202ENST00000616237 PFKFB3Q16875 520 aaPredicted RBP19.57■□□□□ 0.72
LHX1-202ENST00000616237 PHKBQ93100 1093 aa19.57■□□□□ 0.72
LHX1-202ENST00000616237 IL17RAQ96F46 866 aa19.57■□□□□ 0.72
LHX1-202ENST00000616237 BCAS3Q9H6U6 928 aa19.57■□□□□ 0.72
LHX1-202ENST00000616237 PDRG1Q9NUG6 133 aa19.57■□□□□ 0.72
LHX1-202ENST00000616237 POLR3EQ9NVU0 708 aa19.57■□□□□ 0.72
LHX1-202ENST00000616237 BARHL2Q9NY43 387 aa19.57■□□□□ 0.72
LHX1-202ENST00000616237 RTEL1Q9NZ71 1219 aa19.57■□□□□ 0.72
LHX1-202ENST00000616237 KIAA0355O15063 1070 aa19.57■□□□□ 0.72
LHX1-202ENST00000616237 MMP3P08254 477 aa19.57■□□□□ 0.72
LHX1-202ENST00000616237 PPP1R13LQ8WUF5 828 aa19.57■□□□□ 0.72
LHX1-202ENST00000616237 EMID1Q96A84 441 aaPredicted RBP19.57■□□□□ 0.72
LHX1-202ENST00000616237 INPP4AQ96PE3 977 aaPredicted RBP19.57■□□□□ 0.72
LHX1-202ENST00000616237 PRKAG2Q9UGJ0 569 aa19.57■□□□□ 0.72
LHX1-202ENST00000616237 TBX21Q9UL17 535 aa19.57■□□□□ 0.72
LHX1-202ENST00000616237 DCDC2CA8MYV0 355 aa19.56■□□□□ 0.72
LHX1-202ENST00000616237 ADAMTS3O15072 1205 aa19.56■□□□□ 0.72
LHX1-202ENST00000616237 PRPF3O43395 683 aaKnown RBP19.56■□□□□ 0.72
LHX1-202ENST00000616237 SORBS3O60504 671 aa19.56■□□□□ 0.72
LHX1-202ENST00000616237 CD4P01730 458 aa19.56■□□□□ 0.72
LHX1-202ENST00000616237 UBA1P22314 1058 aaKnown RBP19.56■□□□□ 0.72
LHX1-202ENST00000616237 C8orf34Q49A92 452 aa19.56■□□□□ 0.72
LHX1-202ENST00000616237 MYSM1Q5VVJ2 828 aa19.56■□□□□ 0.72
LHX1-202ENST00000616237 PCNX4Q63HM2 1172 aa19.56■□□□□ 0.72
LHX1-202ENST00000616237 PPP1R18Q6NYC8 613 aa19.56■□□□□ 0.72
LHX1-202ENST00000616237 BADQ92934 168 aa19.56■□□□□ 0.72
LHX1-202ENST00000616237 MTG1Q9BT17 334 aaPredicted RBP19.56■□□□□ 0.72
LHX1-202ENST00000616237 RIC8AQ9NPQ8 531 aa19.56■□□□□ 0.72
LHX1-202ENST00000616237 TMEM39AQ9NV64 488 aa19.56■□□□□ 0.72
LHX1-202ENST00000616237 PCDHA6Q9UN73 950 aa19.56■□□□□ 0.72
LHX1-202ENST00000616237 PCDHA8Q9Y5H6 950 aa19.56■□□□□ 0.72
LHX1-202ENST00000616237 SCN10AQ9Y5Y9 1956 aa19.55■□□□□ 0.72
LHX1-202ENST00000616237 MROH7Q68CQ1 1323 aa19.55■□□□□ 0.72
LHX1-202ENST00000616237 SMCO2A6NFE2 343 aa19.55■□□□□ 0.72
LHX1-202ENST00000616237 hCG_1984214I3L0E3 225 aa19.55■□□□□ 0.72
LHX1-202ENST00000616237 SCG2P13521 617 aa19.55■□□□□ 0.72
LHX1-202ENST00000616237 IFNAR1P17181 557 aa19.55■□□□□ 0.72
LHX1-202ENST00000616237 ICAM3P32942 547 aa19.55■□□□□ 0.72
LHX1-202ENST00000616237 FXR1P51114 621 aaKnown RBP eCLIP19.55■□□□□ 0.72
LHX1-202ENST00000616237 ZNF713Q8N859 430 aaPredicted RBP19.55■□□□□ 0.72
LHX1-202ENST00000616237 ZNF274Q96GC6 653 aaPredicted RBP19.55■□□□□ 0.72
LHX1-202ENST00000616237 LBHD1Q9BQE6 289 aaPredicted RBP19.55■□□□□ 0.72
LHX1-202ENST00000616237 UBE2OQ9C0C9 1292 aaKnown RBP19.55■□□□□ 0.72
LHX1-202ENST00000616237 SPATA31C2B4DYI2 1134 aa19.54■□□□□ 0.72
LHX1-202ENST00000616237 STAM2O75886 525 aa19.54■□□□□ 0.72
LHX1-202ENST00000616237 GGPS1O95749 300 aa19.54■□□□□ 0.72
LHX1-202ENST00000616237 TGFB3P10600 412 aa19.54■□□□□ 0.72
LHX1-202ENST00000616237 LAMC2Q13753 1193 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms