RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 BARHL2Q9NY43 387 aa13.83□□□□□ -0.2
MSH6-213ENST00000614496 CCNL1Q9UK58 526 aaPredicted RBP13.83□□□□□ -0.2
MSH6-213ENST00000614496 KDM3BQ7LBC6 1761 aa13.82□□□□□ -0.2
MSH6-213ENST00000614496 SPDYE3A6NKU9 549 aa13.82□□□□□ -0.2
MSH6-213ENST00000614496 PALMO75781 387 aa13.82□□□□□ -0.2
MSH6-213ENST00000614496 NTSR2O95665 410 aa13.82□□□□□ -0.2
MSH6-213ENST00000614496 SLC1A4P43007 532 aa13.82□□□□□ -0.2
MSH6-213ENST00000614496 TCP10Q12799 353 aa13.82□□□□□ -0.2
MSH6-213ENST00000614496 KCNB1Q14721 858 aa13.82□□□□□ -0.2
MSH6-213ENST00000614496 TBC1D9BQ66K14 1250 aa13.82□□□□□ -0.2
MSH6-213ENST00000614496 CCDC25Q86WR0 208 aa13.82□□□□□ -0.2
MSH6-213ENST00000614496 RDH13Q8NBN7 331 aa13.82□□□□□ -0.2
MSH6-213ENST00000614496 PROCA1Q8NCQ7 364 aaPredicted RBP13.82□□□□□ -0.2
MSH6-213ENST00000614496 GIMAP8Q8ND71 665 aaPredicted RBP13.82□□□□□ -0.2
MSH6-213ENST00000614496 CUL5Q93034 780 aa13.82□□□□□ -0.2
MSH6-213ENST00000614496 MAGEF1Q9HAY2 307 aa13.82□□□□□ -0.2
MSH6-213ENST00000614496 SNX12Q9UMY4 172 aa13.82□□□□□ -0.2
MSH6-213ENST00000614496 CTDP1Q9Y5B0 961 aaPredicted RBP13.82□□□□□ -0.2
MSH6-213ENST00000614496 ANO9A1A5B4 782 aa13.82□□□□□ -0.2
MSH6-213ENST00000614496 RHOBTB3O94955 611 aa13.82□□□□□ -0.2
MSH6-213ENST00000614496 MAGEA9P43362 315 aa13.82□□□□□ -0.2
MSH6-213ENST00000614496 C8orf37Q96NL8 207 aa13.82□□□□□ -0.2
MSH6-213ENST00000614496 ANAPC4Q9UJX5 808 aa13.82□□□□□ -0.2
MSH6-213ENST00000614496 GCOM1H8Y6P7 765 aaPredicted RBP13.82□□□□□ -0.2
MSH6-213ENST00000614496 MEIS1O00470 390 aa13.82□□□□□ -0.2
MSH6-213ENST00000614496 MYZAPP0CAP1 466 aa13.82□□□□□ -0.2
MSH6-213ENST00000614496 CTNNA1P35221 906 aaKnown RBP13.82□□□□□ -0.2
MSH6-213ENST00000614496 ITPK1Q13572 414 aa13.82□□□□□ -0.2
MSH6-213ENST00000614496 GRM4Q14833 912 aa13.82□□□□□ -0.2
MSH6-213ENST00000614496 KRT71Q3SY84 523 aa13.82□□□□□ -0.2
MSH6-213ENST00000614496 UHMK1Q8TAS1 419 aaKnown RBP13.82□□□□□ -0.2
MSH6-213ENST00000614496 CTNNBL1Q8WYA6 563 aaPredicted RBP13.82□□□□□ -0.2
MSH6-213ENST00000614496 CCSER1Q9C0I3 900 aa13.82□□□□□ -0.2
MSH6-213ENST00000614496 TSKSQ9UJT2 592 aa13.82□□□□□ -0.2
MSH6-213ENST00000614496 RAB21Q9UL25 225 aa13.82□□□□□ -0.2
MSH6-213ENST00000614496 COL4A3BPQ9Y5P4 624 aa13.82□□□□□ -0.2
MSH6-213ENST00000614496 CAPN6Q9Y6Q1 641 aa13.82□□□□□ -0.2
MSH6-213ENST00000614496 MAP2K7O14733 419 aa13.81□□□□□ -0.2
MSH6-213ENST00000614496 FAM13AO94988 1023 aa13.81□□□□□ -0.2
MSH6-213ENST00000614496 GCNT3O95395 438 aa13.81□□□□□ -0.2
MSH6-213ENST00000614496 KCTD1Q719H9 257 aa13.81□□□□□ -0.2
MSH6-213ENST00000614496 MAEAQ7L5Y9 396 aa13.81□□□□□ -0.2
MSH6-213ENST00000614496 AP1M1Q9BXS5 423 aa13.81□□□□□ -0.2
MSH6-213ENST00000614496 PSTPIP2Q9H939 334 aa13.81□□□□□ -0.2
MSH6-213ENST00000614496 SH3GLB2Q9NR46 395 aa13.81□□□□□ -0.2
MSH6-213ENST00000614496 DMGDHQ9UI17 866 aaKnown RBP13.81□□□□□ -0.2
MSH6-213ENST00000614496 KRIT1O00522 736 aa13.81□□□□□ -0.2
MSH6-213ENST00000614496 PABPC4Q13310 644 aaKnown RBP eCLIP13.81□□□□□ -0.2
MSH6-213ENST00000614496 MED1Q15648 1581 aaPredicted RBP13.81□□□□□ -0.2
MSH6-213ENST00000614496 MEX3CQ5U5Q3 659 aaKnown RBP13.81□□□□□ -0.2
MSH6-213ENST00000614496 C3orf67Q6ZVT6 689 aa13.81□□□□□ -0.2
MSH6-213ENST00000614496 CLEC10AQ8IUN9 316 aa13.81□□□□□ -0.2
MSH6-213ENST00000614496 LMBR1Q8WVP7 490 aa13.81□□□□□ -0.2
MSH6-213ENST00000614496 PSD3Q9NYI0 1048 aa13.81□□□□□ -0.2
MSH6-213ENST00000614496 ARMCX3Q9UH62 379 aaPredicted RBP13.81□□□□□ -0.2
MSH6-213ENST00000614496 GGA1Q9UJY5 639 aa13.81□□□□□ -0.2
MSH6-213ENST00000614496 PDS5AQ29RF7 1337 aaKnown RBP13.81□□□□□ -0.2
MSH6-213ENST00000614496 FER1L4A9Z1Z3 1794 aa13.81□□□□□ -0.2
MSH6-213ENST00000614496 IL17AQ16552 155 aa13.81□□□□□ -0.2
MSH6-213ENST00000614496 LRRC31Q6UY01 552 aa13.81□□□□□ -0.2
MSH6-213ENST00000614496 SCLT1Q96NL6 688 aa13.81□□□□□ -0.2
MSH6-213ENST00000614496 PKD2L1Q9P0L9 805 aa13.81□□□□□ -0.2
MSH6-213ENST00000614496 FAM169AQ9Y6X4 670 aa13.81□□□□□ -0.2
MSH6-213ENST00000614496 GOLGA6L10A0A0M3HER8 536 aa13.8□□□□□ -0.2
MSH6-213ENST00000614496 NR2F2P24468 414 aa13.8□□□□□ -0.2
MSH6-213ENST00000614496 SCNN1DP51172 638 aa13.8□□□□□ -0.2
MSH6-213ENST00000614496 ARHGAP44Q17R89 818 aa13.8□□□□□ -0.2
MSH6-213ENST00000614496 PRR16Q569H4 304 aa13.8□□□□□ -0.2
MSH6-213ENST00000614496 C12orf60Q5U649 245 aa13.8□□□□□ -0.2
MSH6-213ENST00000614496 CEP95Q96GE4 821 aa13.8□□□□□ -0.2
MSH6-213ENST00000614496 TTI2Q6NXR4 508 aa13.8□□□□□ -0.2
MSH6-213ENST00000614496 UNC13DQ70J99 1090 aa13.8□□□□□ -0.2
MSH6-213ENST00000614496 IQCDQ96DY2 449 aa13.8□□□□□ -0.2
MSH6-213ENST00000614496 ZC3H12CQ9C0D7 883 aaKnown RBP13.8□□□□□ -0.2
MSH6-213ENST00000614496 MST1RQ04912 1400 aa13.8□□□□□ -0.2
MSH6-213ENST00000614496 EPB41P11171 864 aaKnown RBP13.8□□□□□ -0.2
MSH6-213ENST00000614496 IFT88Q13099 833 aa13.8□□□□□ -0.2
MSH6-213ENST00000614496 CABS1Q96KC9 395 aa13.8□□□□□ -0.2
MSH6-213ENST00000614496 A0A087WUV0 522 aaPredicted RBP13.79□□□□□ -0.2
MSH6-213ENST00000614496 MYMKA6NI61 221 aa13.79□□□□□ -0.2
MSH6-213ENST00000614496 E9PMD0 336 aa13.79□□□□□ -0.2
MSH6-213ENST00000614496 HGSO14964 777 aaPredicted RBP13.79□□□□□ -0.2
MSH6-213ENST00000614496 EFCAB13Q8IY85 973 aa13.79□□□□□ -0.2
MSH6-213ENST00000614496 SPATA20Q8TB22 786 aa13.79□□□□□ -0.2
MSH6-213ENST00000614496 HDAC7Q8WUI4 952 aa13.79□□□□□ -0.2
MSH6-213ENST00000614496 MTRQ99707 1265 aa13.79□□□□□ -0.2
MSH6-213ENST00000614496 DNM3Q9UQ16 869 aa13.79□□□□□ -0.2
MSH6-213ENST00000614496 CLIC2O15247 247 aa13.79□□□□□ -0.2
MSH6-213ENST00000614496 KRT14P02533 472 aa13.79□□□□□ -0.2
MSH6-213ENST00000614496 XRCC5P13010 732 aaKnown RBP13.79□□□□□ -0.2
MSH6-213ENST00000614496 MAP2K1Q02750 393 aaPredicted RBP13.79□□□□□ -0.2
MSH6-213ENST00000614496 TRAPPC3LQ5T215 181 aa13.79□□□□□ -0.2
MSH6-213ENST00000614496 CCDC26Q8TAB7 109 aa13.79□□□□□ -0.2
MSH6-213ENST00000614496 LRRC45Q96CN5 670 aa13.79□□□□□ -0.2
MSH6-213ENST00000614496 DNAJC7Q99615 494 aa13.79□□□□□ -0.2
MSH6-213ENST00000614496 NUCKS1Q9H1E3 243 aaKnown RBP13.79□□□□□ -0.2
MSH6-213ENST00000614496 LMO7Q8WWI1 1683 aa13.79□□□□□ -0.2
MSH6-213ENST00000614496 FLOT1O75955 427 aa13.79□□□□□ -0.2
MSH6-213ENST00000614496 IRX3P78415 501 aaPredicted RBP13.79□□□□□ -0.2
MSH6-213ENST00000614496 LLGL1Q15334 1064 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms