RNA–Protein interactions for RNA: ENST00000614293.4

ABCA2-223, Transcript of ATP binding cassette subfamily A member 2, human

TSL 5 BASIC

Gene ABCA2, Length 8,146 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-223	ENST00000614293	PDE1B	Q01064	536 aa		13.21	□□□□□ -0.3
ABCA2-223	ENST00000614293	CCDC17	Q96LX7	622 aa		13.21	□□□□□ -0.3
ABCA2-223	ENST00000614293	OPHN1	O60890	802 aa		13.21	□□□□□ -0.3
ABCA2-223	ENST00000614293	HSPA6	P17066	643 aa		13.21	□□□□□ -0.3
ABCA2-223	ENST00000614293	STAT2	P52630	851 aa		13.21	□□□□□ -0.3
ABCA2-223	ENST00000614293	MFAP3	P55082	362 aa		13.21	□□□□□ -0.3
ABCA2-223	ENST00000614293	LRMP	Q12912	555 aa		13.21	□□□□□ -0.3
ABCA2-223	ENST00000614293	POLA2	Q14181	598 aa		13.21	□□□□□ -0.3
ABCA2-223	ENST00000614293	ANO1	Q5XXA6	986 aa		13.21	□□□□□ -0.3
ABCA2-223	ENST00000614293	RFX6	Q8HWS3	928 aa		13.21	□□□□□ -0.3
ABCA2-223	ENST00000614293	NBPF26	B4DH59	902 aa		13.21	□□□□□ -0.3
ABCA2-223	ENST00000614293	SLMAP	Q14BN4	828 aa		13.21	□□□□□ -0.3
ABCA2-223	ENST00000614293	ZSCAN26	Q16670	478 aa		13.21	□□□□□ -0.3
ABCA2-223	ENST00000614293	CEP19	Q96LK0	163 aa		13.21	□□□□□ -0.3
ABCA2-223	ENST00000614293	TRIM62	Q9BVG3	475 aa		13.21	□□□□□ -0.3
ABCA2-223	ENST00000614293	HGS	O14964	777 aa	Predicted RBP	13.2	□□□□□ -0.3
ABCA2-223	ENST00000614293	RPS8	P62241	208 aa	Known RBP	13.2	□□□□□ -0.3
ABCA2-223	ENST00000614293	SFSWAP	Q12872	951 aa	Known RBP	13.2	□□□□□ -0.3
ABCA2-223	ENST00000614293	ZKSCAN8	Q15776	578 aa	Predicted RBP	13.2	□□□□□ -0.3
ABCA2-223	ENST00000614293	RNF207	Q6ZRF8	634 aa		13.2	□□□□□ -0.3
ABCA2-223	ENST00000614293	ANKRD44	Q8N8A2	993 aa		13.2	□□□□□ -0.3
ABCA2-223	ENST00000614293	INTS4	Q96HW7	963 aa	Known RBP	13.2	□□□□□ -0.3
ABCA2-223	ENST00000614293	HNRNPDL	O14979	420 aa	Known RBP	13.2	□□□□□ -0.3
ABCA2-223	ENST00000614293	TFAP4	Q01664	338 aa		13.2	□□□□□ -0.3
ABCA2-223	ENST00000614293	PI4K2B	Q8TCG2	481 aa		13.2	□□□□□ -0.3
ABCA2-223	ENST00000614293	SPATA17	Q96L03	361 aa		13.2	□□□□□ -0.3
ABCA2-223	ENST00000614293	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	13.2	□□□□□ -0.3	4e-8	■■■□□ 17.1
ABCA2-223	ENST00000614293	KIFC3	Q9BVG8	833 aa		13.2	□□□□□ -0.3
ABCA2-223	ENST00000614293	MEIS1	O00470	390 aa		13.2	□□□□□ -0.3
ABCA2-223	ENST00000614293	CCDC15	Q0P6D6	951 aa		13.2	□□□□□ -0.3
ABCA2-223	ENST00000614293	VEPH1	Q14D04	833 aa		13.2	□□□□□ -0.3
ABCA2-223	ENST00000614293	RPF1	Q9H9Y2	349 aa	Known RBP	13.2	□□□□□ -0.3
ABCA2-223	ENST00000614293	COPRS	Q9NQ92	184 aa		13.2	□□□□□ -0.3
ABCA2-223	ENST00000614293	CREB3	O43889	395 aa		13.2	□□□□□ -0.3
ABCA2-223	ENST00000614293	E2F5	Q15329	346 aa		13.2	□□□□□ -0.3
ABCA2-223	ENST00000614293	NDEL1	Q9GZM8	345 aa		13.2	□□□□□ -0.3
ABCA2-223	ENST00000614293	ABCF3	Q9NUQ8	709 aa		13.2	□□□□□ -0.3
ABCA2-223	ENST00000614293	SORBS3	O60504	671 aa		13.2	□□□□□ -0.3
ABCA2-223	ENST00000614293	CCNY	Q8ND76	341 aa		13.2	□□□□□ -0.3
ABCA2-223	ENST00000614293	MORC4	Q8TE76	937 aa		13.2	□□□□□ -0.3
ABCA2-223	ENST00000614293	FAM149B1	Q96BN6	582 aa		13.2	□□□□□ -0.3
ABCA2-223	ENST00000614293	FOPNL	Q96NB1	174 aa		13.2	□□□□□ -0.3
ABCA2-223	ENST00000614293	G3BP2	Q9UN86	482 aa	Known RBP	13.2	□□□□□ -0.3
ABCA2-223	ENST00000614293	FPGT-TNNI3K	V9GXZ4	949 aa		13.2	□□□□□ -0.3
ABCA2-223	ENST00000614293	NPC1L1	Q9UHC9	1359 aa		13.2	□□□□□ -0.3
ABCA2-223	ENST00000614293	ALDH1A1	P00352	501 aa		13.2	□□□□□ -0.3
ABCA2-223	ENST00000614293	HSP90AA5P	Q58FG0	334 aa		13.2	□□□□□ -0.3
ABCA2-223	ENST00000614293	ARHGEF18	Q6ZSZ5	1173 aa		13.2	□□□□□ -0.3
ABCA2-223	ENST00000614293	RTKN2	Q8IZC4	609 aa		13.2	□□□□□ -0.3
ABCA2-223	ENST00000614293	MAGEB5	Q9BZ81	275 aa		13.2	□□□□□ -0.3
ABCA2-223	ENST00000614293	RGL1	Q9NZL6	768 aa		13.2	□□□□□ -0.3
ABCA2-223	ENST00000614293	HACD3	Q9P035	362 aa		13.2	□□□□□ -0.3
ABCA2-223	ENST00000614293	PSMD2	Q13200	908 aa		13.19	□□□□□ -0.3
ABCA2-223	ENST00000614293	STX19	Q8N4C7	294 aa		13.19	□□□□□ -0.3
ABCA2-223	ENST00000614293	PPWD1	Q96BP3	646 aa	Known RBP	13.19	□□□□□ -0.3
ABCA2-223	ENST00000614293	DNAJC7	Q99615	494 aa		13.19	□□□□□ -0.3
ABCA2-223	ENST00000614293	MEIS3	Q99687	375 aa		13.19	□□□□□ -0.3
ABCA2-223	ENST00000614293	PTGDR	Q13258	359 aa		13.19	□□□□□ -0.3
ABCA2-223	ENST00000614293	CDC26	Q8NHZ8	85 aa		13.19	□□□□□ -0.3
ABCA2-223	ENST00000614293	TCP11	Q8WWU5	503 aa		13.19	□□□□□ -0.3
ABCA2-223	ENST00000614293	IMPACT	Q9P2X3	320 aa		13.19	□□□□□ -0.3
ABCA2-223	ENST00000614293	ARMCX3	Q9UH62	379 aa	Predicted RBP	13.19	□□□□□ -0.3
ABCA2-223	ENST00000614293	RPS6KB1	P23443	525 aa		13.19	□□□□□ -0.3
ABCA2-223	ENST00000614293	CTSW	P56202	376 aa		13.19	□□□□□ -0.3
ABCA2-223	ENST00000614293	PHKG1	Q16816	387 aa		13.19	□□□□□ -0.3
ABCA2-223	ENST00000614293	MCU	Q8NE86	351 aa		13.19	□□□□□ -0.3
ABCA2-223	ENST00000614293	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	13.19	□□□□□ -0.3
ABCA2-223	ENST00000614293	RIPOR2	Q9Y4F9	1068 aa		13.19	□□□□□ -0.3
ABCA2-223	ENST00000614293	GCKR	Q14397	625 aa		13.19	□□□□□ -0.3
ABCA2-223	ENST00000614293	ATG16L1	Q676U5	607 aa		13.19	□□□□□ -0.3
ABCA2-223	ENST00000614293	ALKBH8	Q96BT7	664 aa	Known RBP	13.19	□□□□□ -0.3
ABCA2-223	ENST00000614293	PAWR	Q96IZ0	340 aa	Known RBP	13.19	□□□□□ -0.3
ABCA2-223	ENST00000614293	KDM4C	Q9H3R0	1056 aa		13.19	□□□□□ -0.3
ABCA2-223	ENST00000614293	STK17A	Q9UEE5	414 aa		13.19	□□□□□ -0.3
ABCA2-223	ENST00000614293	PA2G4	Q9UQ80	394 aa	Known RBP	13.19	□□□□□ -0.3
ABCA2-223	ENST00000614293	LRRC31	Q6UY01	552 aa		13.19	□□□□□ -0.3
ABCA2-223	ENST00000614293	KIAA0825	Q8IV33	1275 aa		13.19	□□□□□ -0.3
ABCA2-223	ENST00000614293	RAET1E	Q8TD07	263 aa		13.19	□□□□□ -0.3
ABCA2-223	ENST00000614293	CCDC151	A5D8V7	595 aa		13.19	□□□□□ -0.3
ABCA2-223	ENST00000614293		H3BRJ5	948 aa		13.19	□□□□□ -0.3
ABCA2-223	ENST00000614293	ESRRG	P62508	458 aa		13.19	□□□□□ -0.3
ABCA2-223	ENST00000614293	DPYD	Q12882	1025 aa		13.19	□□□□□ -0.3
ABCA2-223	ENST00000614293	TRIM59	Q8IWR1	403 aa		13.19	□□□□□ -0.3
ABCA2-223	ENST00000614293	PGBD3	Q8N328	593 aa		13.19	□□□□□ -0.3
ABCA2-223	ENST00000614293	MTBP	Q96DY7	904 aa		13.19	□□□□□ -0.3
ABCA2-223	ENST00000614293	PASK	Q96RG2	1323 aa		13.19	□□□□□ -0.3
ABCA2-223	ENST00000614293	ERVV-2	B6SEH9	535 aa		13.18	□□□□□ -0.3
ABCA2-223	ENST00000614293	IFT43	Q96FT9	208 aa		13.18	□□□□□ -0.3
ABCA2-223	ENST00000614293	ZNF577	Q9BSK1	485 aa		13.18	□□□□□ -0.3
ABCA2-223	ENST00000614293	SEMA3E	O15041	775 aa		13.18	□□□□□ -0.3
ABCA2-223	ENST00000614293	BNIP3L	O60238	219 aa		13.18	□□□□□ -0.3
ABCA2-223	ENST00000614293	MAGEA1	P43355	309 aa		13.18	□□□□□ -0.3
ABCA2-223	ENST00000614293	RAD51	Q06609	339 aa		13.18	□□□□□ -0.3
ABCA2-223	ENST00000614293	SH3TC2	Q8TF17	1288 aa		13.18	□□□□□ -0.3
ABCA2-223	ENST00000614293	FRMPD2	Q68DX3	1309 aa	Predicted RBP	13.18	□□□□□ -0.3
ABCA2-223	ENST00000614293	SYNM	O15061	1565 aa		13.18	□□□□□ -0.3
ABCA2-223	ENST00000614293	TAC1	P20366	129 aa		13.18	□□□□□ -0.3
ABCA2-223	ENST00000614293	ASPRV1	Q53RT3	343 aa		13.18	□□□□□ -0.3
ABCA2-223	ENST00000614293	KCTD6	Q8NC69	237 aa		13.18	□□□□□ -0.3
ABCA2-223	ENST00000614293	SNX2	O60749	519 aa		13.18	□□□□□ -0.3

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