RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 FBXW10Q5XX13 1052 aa12.09□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 FAM114A1Q8IWE2 563 aa12.09□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 RASGRP4Q8TDF6 673 aa12.09□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 TBCKQ8TEA7 893 aa12.09□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 TEKT1Q969V4 418 aa12.09□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 CCDC47Q96A33 483 aaKnown RBP12.09□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 BLZF1Q9H2G9 400 aa12.09□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 CAPN11Q9UMQ6 739 aa12.09□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 C6orf229H3BNL8 230 aa12.08□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 PSMA7O14818 248 aa12.08□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 SSBP05455 408 aaKnown RBP eCLIP12.08□□□□□ -0.479e-56■■■□□ 14.6
SENP3-EIF4A1-201ENST00000614237 AKR1B1P15121 316 aa12.08□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 MEA1Q16626 185 aa12.08□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 HDXQ7Z353 690 aa12.08□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 CRYGNQ8WXF5 182 aa12.08□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 NUP88Q99567 741 aaPredicted RBP12.08□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 DUSP9Q99956 384 aaKnown RBP12.08□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 TTYH3Q9C0H2 523 aa12.08□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 ABHD10Q9NUJ1 306 aa12.08□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 SERPINA10Q9UK55 444 aa12.08□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 MRFAP1Q9Y605 127 aa12.08□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 CCNT1O60563 726 aaKnown RBP12.08□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 CENPPQ6IPU0 288 aa12.08□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 COL23A1Q86Y22 540 aaPredicted RBP12.08□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 MB21D1Q8N884 522 aa12.08□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 GMCL1P1Q8NEA9 526 aa12.08□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 PCMTD1Q96MG8 357 aaPredicted RBP12.08□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 RAB34Q9BZG1 259 aa12.08□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 STK24Q9Y6E0 443 aa12.08□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 ZBTB5O15062 677 aa12.08□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 ZEB2O60315 1214 aa12.08□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 HLA-DOAP06340 250 aa12.08□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 PLCG1P19174 1290 aa12.08□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 DNM2P50570 870 aa12.08□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 USP11P51784 963 aa12.08□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 CASP8Q14790 479 aa12.08□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 CYP26C1Q6V0L0 522 aa12.08□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.08□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 USP40Q9NVE5 1235 aa12.08□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 CTAGE15A4D2H0 777 aa12.07□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 CTAGE8P0CG41 777 aa12.07□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 DPP8Q6V1X1 898 aaPredicted RBP12.07□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 RAD9BQ6WBX8 426 aa12.07□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 UNC13DQ70J99 1090 aa12.07□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 RSRC2Q7L4I2 434 aaKnown RBP12.07□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 CTAGE6Q86UF2 777 aa12.07□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 CTAGE4Q8IX94 777 aa12.07□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 ERGIC2Q96RQ1 377 aa12.07□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 GOLGA8HP0CJ92 632 aa12.07□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 HNRNPH3P31942 346 aaKnown RBP12.07□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 CASP14P31944 242 aa12.07□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 GRB10Q13322 594 aa12.07□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 CC2D2BQ6DHV5 1058 aa12.07□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 ADGRF4Q8IZF3 695 aa12.07□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 P2RX5Q93086 422 aa12.07□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 CALML4Q96GE6 196 aa12.07□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 BLOC1S4Q9NUP1 217 aa12.07□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 MYH7BA7E2Y1 1941 aa12.07□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 SCN9AQ15858 1988 aa12.07□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 RNF40O75150 1001 aa12.07□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 RASSF8Q8NHQ8 419 aa12.07□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 PNMA5Q96PV4 448 aa12.07□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 GDAQ9Y2T3 454 aa12.07□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 N4BP3O15049 544 aa12.06□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 TRIM37O94972 964 aa12.06□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 FXR1P51114 621 aaKnown RBP eCLIP12.06□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 MRPL12P52815 198 aaKnown RBP12.06□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 DACT2Q5SW24 774 aa12.06□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 BTNL9Q6UXG8 535 aa12.06□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 GUF1Q8N442 669 aaKnown RBP12.06□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 C7orf43Q8WVR3 580 aa12.06□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 RABGGTAQ92696 567 aa12.06□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 SECISBP2LQ93073 1101 aaKnown RBP12.06□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 GMCL1Q96IK5 515 aa12.06□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 FRMD3A2A2Y4 597 aa12.06□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 CTAGE9A4FU28 777 aa12.06□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 LRRIQ3A6PVS8 624 aaPredicted RBP12.06□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 ENTPD3O75355 529 aa12.06□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 CRKP46108 304 aa12.06□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 ATP1A2P50993 1020 aa12.06□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 TMEM266Q2M3C6 531 aa12.06□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 KCTD16Q68DU8 428 aa12.06□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 ZC3H3Q8IXZ2 948 aaKnown RBP12.06□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 CUL5Q93034 780 aa12.06□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 EXOC4Q96A65 974 aa12.06□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 PLIN2Q99541 437 aa12.06□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 KANSL2Q9H9L4 492 aa12.06□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 BAZ2BQ9UIF8 2168 aaKnown RBP12.06□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 SLX4Q8IY92 1834 aa12.06□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 TBX3O15119 743 aa12.06□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 PPP1R11O60927 126 aaPredicted RBP12.06□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 NOP2P46087 812 aaKnown RBP12.06□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 AP3B2Q13367 1082 aa12.06□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 CALCRLQ16602 461 aa12.06□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 LETM2Q2VYF4 491 aa12.06□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 MSL3Q8N5Y2 521 aaKnown RBP12.06□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 CRACR2AQ9BSW2 395 aa12.06□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 EDEM3Q9BZQ6 932 aa12.06□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 PI4KBQ9UBF8 816 aa12.06□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 RNASE9P60153 205 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms